Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01849 GTCTAAACGAGAGAAATAAAAGGACTTAATTGAAGATGAACAGCCATAATTAGAACTCGGGCTTAATTTAGAGAGCATGGGACGTCCAACGGCCAAGACGCTTGTCCGACTCATCATGGTGGTTAACATAGCCATCTTTTCGGCGCCGGCGGCAGCGGCAGTACCTTCTCAAGCCTTACCCGGGTGTGAAAGTAAGTGTGGGGACTTGGAAATTCCATATCCGTTCGGGATGAAAAAAGGGTGTTATCTCAACATTAATTTCTCCATCACCTGCAACGAAACTCATTATCATCCTCCAAAGCCATTTCTAATGAACGGCAACATTGAAGTAACCAATATATCGCTCTATGGCGAGCTCCACATCTTGAACTACATAGCCCGAGATTGCTACAGAAAAGATGGCCTTCCTGGCATCAATAACAGACCCAGACTTACTGTCCCCATGTTCGCAATTTCCAACACCAAGAACAAGTTCACCGTCGTTGGCTGCGATACATATGCTTATATCTATGGTGACCTTCCGGGTGAATCCTACACAAGTGGGTGCATGGCATTGTGTACTGCAGAGAGTGATGTAACTATAGAAGATGGGTCCTGCTCTGGGAATGGGTGCTGTCAGTTGGAAATTCCCAAAGGCCTAAAACTATTACGTCTGGATGTTAGAAGCTTCGATAATCACACATATGTACACAGCTTCAATCCATGTGGCTTTGCATTTGTTGTCCAACAAAACCAATTTAGTTTCTCCAAAAAATATATTCAAAACATCACGGAAGACAGACTTCCGCTTGTGCTTGATTGGGGCATCAAAAATGATACTTGCCAACCACCCAACCAACAGAGACAATGCCTATGTGGACCAAACAGCNAGAGGAATAGTAGCTTATCACTTGATGGATCTGAATATTATTGTCAGTGCTTGGATGGTTTCCATGGAAATCCTTATCTCCCTNCAGGTTGTCAAGATATAAATGAATGTGAAGATGGATCCGATCCATGTGTACCCCAAGCCAAGTGTGAAAACAAAGCAGGAAATTATACCTGCTATTGTCCCGAGAAGTATGAAGGAGATGGAAAACGTGAGGGAGCAGGTTGCAAACGAAAGTACTCCAACTCCATGTTGATTCAAATTATCATTGGAACTGGTGTGGGGTTTGTAGTTTTGCTAATCGGTATCTCATGGTTATACTTGGGTTACAAGAAGTGGAAGTTCATCCAACAGAAAGAGAAGTTTTTCAAGAACAATGGAGGCACCATGCTTCAACAACACCTTTCTCAGTGGCAGTCACCTGCTGACACAGTCAAAATTTTTAGCCAAGAGGAGTTGGAAAAAGCTACAAACAAGTTCAACGAAAGCACAGTGGTAGGAAAAGGTGGCTATGGCACTGTTCACAAAGGAGTCTTGGACGATGGTTCGGTTGTCGCCATTAAAAAATCACAATTAGTTGACCAATCCCAAACTTCCCAATTCATCAATGAAGTCATTGTTTTGTCCCAAGTCAACCACCGTAACGTGGTCAAGCTCTTAGGGTGTTGTTTGGAGACACAAGTTCCATTATTGGTGTACGAGTTCATCCCCAACGGCACGCTCTTTGACCACATCCATGACCAAACAAAGTACTATTCTAATCATCTTTCGTGGGAAGCTCGCTTGAGAATAGCTTCAGAAACTGCAGGGGTCATTTCATATTTGCATTCTTCAGCTTCTACTCCAATTATCCACAGAGATATCAAATCTGCTAACATACTGTTAGACCATAATTTAACTGCAAAGGTGTCGGATTTTGGTGCCTCGAAGTTAGTTCCAATGGATCAAACTCAGTTATCCACGATGGTGCAAGGAACTCTTGGATATTTGGACCCTGAATACTTGTTAACAAGTGAGTTGACAGAGAAAAGTGATGTGTACAGCTTTGGAATTGTGCTTCTAGAGCTTATAACAGGGAAGAAGGCAGTGCGTTTTGATGGACCAGAAATAGAGAGGAATCTGGCCATGTATGTCTTTCGTGCAATGAAAGAAGATCGTTTAGTAGAAATTGTGGACAAGGGAATGGTGATGGATGAAGGGAAGTTGAATCAAATAAAAGAAGTAGTAAAAGTAGCTAAGGAGTGTGTAAGAGTGAAAGGAGAGGAGCGACCTAGCATGAAAGAGGTGGCTATGGAATTAGAGGGCTTGAGAGTGATGCAGGTTCAACATTCATGGATTAACAACAATTTATCCAACTCGGAAGAGATGATAAGTTTATTGGATGAAACTCCAAACTCCACCGACCAATTTCTTGTTAGCAACAGTATTAATTTTGTGGATAATAGTATAAAGATAGACATTTTGGGGACACATATCCCAGATGCAAGATGATTGATGGAGTGTTTTCTTAAAATGTATCAGGATGAAGATTAAAACCTCTCGTATCTCTTAGCAGAAAATATATATTATAAACAATCAAGTTGTGCTTATATTAATATTA 2468 41.45 MGRPTAKTLVRLIMVVNIAIFSAPAAAAVPSQALPGCESKCGDLEIPYPFGMKKGCYLNINFSITCNETHYHPPKPFLMNGNIEVTNISLYGELHILNYIARDCYRKDGLPGINNRPRLTVPMFAISNTKNKFTVVGCDTYAYIYGDLPGESYTSGCMALCTAESDVTIEDGSCSGNGCCQLEIPKGLKLLRLDVRSFDNHTYVHSFNPCGFAFVVQQNQFSFSKKYIQNITEDRLPLVLDWGIKNDTCQPPNQQRQCLCGPNSXRNSSLSLDGSEYYCQCLDGFHGNPYLPXGCQDINECEDGSDPCVPQAKCENKAGNYTCYCPEKYEGDGKREGAGCKRKYSNSMLIQIIIGTGVGFVVLLIGISWLYLGYKKWKFIQQKEKFFKNNGGTMLQQHLSQWQSPADTVKIFSQEELEKATNKFNESTVVGKGGYGTVHKGVLDDGSVVAIKKSQLVDQSQTSQFINEVIVLSQVNHRNVVKLLGCCLETQVPLLVYEFIPNGTLFDHIHDQTKYYSNHLSWEARLRIASETAGVISYLHSSASTPIIHRDIKSANILLDHNLTAKVSDFGASKLVPMDQTQLSTMVQGTLGYLDPEYLLTSELTEKSDVYSFGIVLLELITGKKAVRFDGPEIERNLAMYVFRAMKEDRLVEIVDKGMVMDEGKLNQIKEVVKVAKECVRVKGEERPSMKEVAMELEGLRVMQVQHSWINNNLSNSEEMISLLDETPNSTDQFLVSNSINFVDNSIKIDILGTHIPDAR 760
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 46101641 46104550 - XM_039028378.1 Bhi04g01849 33458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01849 760 Gene3D Transferase(Phosphotransferase) domain 1 500 720 - -
Bhi04g01849 760 CDD EGF_CA 297 332 - -
Bhi04g01849 760 CDD STKc_IRAK 430 700 - -
Bhi04g01849 760 Pfam Protein tyrosine and serine/threonine kinase 428 697 IPR001245 GO:0004672|GO:0006468
Bhi04g01849 760 SUPERFAMILY Protein kinase-like (PK-like) 403 698 IPR011009 -
Bhi04g01849 760 SMART egfca_6 297 341 IPR001881 GO:0005509
Bhi04g01849 760 Pfam EGF domain 301 334 IPR024731 -
Bhi04g01849 760 Gene3D Laminin 243 340 - -
Bhi04g01849 760 ProSitePatterns Calcium-binding EGF-like domain signature. 297 323 IPR018097 GO:0005509
Bhi04g01849 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Bhi04g01849 760 ProSitePatterns Protein kinases ATP-binding region signature. 430 453 IPR017441 GO:0005524
Bhi04g01849 760 ProSiteProfiles EGF-like domain profile. 297 332 IPR000742 -
Bhi04g01849 760 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 18 724 - -
Bhi04g01849 760 SMART egf_5 300 341 IPR000742 -
Bhi04g01849 760 SMART egf_5 248 296 IPR000742 -
Bhi04g01849 760 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 724 IPR045274 GO:0007166
Bhi04g01849 760 SUPERFAMILY EGF/Laminin 296 332 - -
Bhi04g01849 760 ProSiteProfiles Protein kinase domain profile. 424 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01849 760 SMART serkin_6 424 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01849 760 Gene3D Phosphorylase Kinase; domain 1 396 499 - -
Bhi04g01849 760 Pfam Wall-associated receptor kinase galacturonan-binding 37 91 IPR025287 GO:0030247
Bhi04g01849 760 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 314 325 IPR000152 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01847 Bhi-Chr4:45797137 Bhi04g01849 Bhi-Chr4:46101641 0 dispersed
Bhi04g01849 Bhi-Chr4:46101641 Bhi04g01853 Bhi-Chr4:46490803 0 dispersed
Bhi04g01848 Bhi-Chr4:45986355 Bhi04g01849 Bhi-Chr4:46101641 0 tandem
Bhi04g01849 Bhi-Chr4:46101641 Bhi04g01850 Bhi-Chr4:46165461 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87700 PF07714 PK_Tyr_Ser-Thr 2.10E-47 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01849 - - cmos:111461403 979.933