Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01850 TTGAAATTCACCAACGCGGCTCTTATTCGAGACATGGGGCGTCCAACAGAGACGCTTATTCGACTCACAGCGGTTAAAATACTAGCCATCTTATTATCGGCTTTTGTCGTCGTAACGGCCACAACGAACACAACAGCAACGGTAGCTTCTCAAGCCTTACCCGGGTGCGACGAATGGTGTGGCGACTTGCAGATTCCATATCCATTTGGGACGAGGGAAGGGTGTTATCTAAATGAAAGGTTCTTCATTAACTGTAGCACAACTCGTCAAGATTCTCCAAAGGCATTTCTACGGGGCGGCAGCGTTCCTGTTACAAATATATCCATCTCGGGGGAGCTCCAAATCTTGAACTTGGTGGCCCAAGAATGCCATCCTCCAAAGATTGGTCCCGATGTTTTTTCCAACGTCTTTCTCGATCTTTCCTACATTATTTCCAGAACCAAAAACAAGTTCATCGCAATGGGCTGCAATACGTTCGCTCATATTTTCGGCCGCGACATAAAAGGGCAATCCTTTAGAACTGCATGTGTGGCGTTGTGTGATGACATTGGGTCCGTAAAAGATGGGGCTTGCTCCGGCAATGGGTGTTGTCAGTTGGAGATTCCCAGTAACCTTAACCATTTGGAGTTCACTGTCAGCAGCTTAAACAATGACGTTAATGTGTCGAGTTTTAATCCTTGTGGGTATGCTTTTCTAGTTGAACAAAACAGCTTCAACTTCTCTTCAAAGTATATACGCAATTTTCCTGAAAACAGAGTTTTGGCAGTGCTTGATTGGGCTATTAGTAACGATACTTGTGTAACCGCTGAGAACAAAACTAATTGTATATGTGGCCGAAATAGCACCAAGGTTGACTTGCTTGATGATCCATCTCGATATCGTTGCCAATGCTTGGAAGGTTTTGAGGGGAATCCGTATCTCCCCGAAGGTTGTCAAGATATTGATGAATGCAAGGATGAAAGTCTTAATGACTGCAGTTTTGAGTGTGTTAATAGAATAGGAAACTATACTTGCAATTGCCCAAAGGGCTTTAAAGGAGATGGAAGACGTGGGGGAGAAGGTTGCACTCGAGAATCCAAGTCTTTTGTTCAAATCATCGTTGGACTTACTGTGGGGTTCGCAGTTCTAGTAATTGCGAGTACATGGTTATACTTAGGTTACAGAAAGTGGAAGTTCATTAAACTGAAGGAGAAGTTTTTTGAGAAAAATGGTGGTTTGATGCTTCAACAACATCTTTCTCAATGGCAAACATCGACTGACATGGTTAGAATTTTCACTCGAGAGGAGCTTGACAAGGCTACAAACAAGTACGACGAAAGCGCAGTGGTCGGAAAAGGTGGCTACGGTACTGTTTACAAAGGAGTCTTAGACGACGGTTCGGTAGTTGCAATCAAGAAATCAAAATTAGTGGACCAATCCCAAACATCCCAATTCATTAACGAAGTCATTGTTCTGTCCCAAATCAACCATCGTAACGTGGTTAAGCTCTTAGGATGTTGTCTAGAGACAGAAGTTCCATTGTTGGTGTATGAGTTCATCACCAACGGCACACTATACGAATATGTCCATGATAAAACCAGTGATCGTCATACTCTTTCATGGGAAGCTCGTTTGAGAATAGCTTCAGAAACTGCAGGAGTCATTTCATATTTGCATTCTTCAGCTTCCACTCCAATTATCCACAGAGATATCAAGACAACAAACATACTTTTAGACCATAATTACACTGCAAAGGTGTCTGATTTTGGTGCTTCCAAGTTGGTTCCAGTAGATCAAACCCAACTATCCACGATGGTTCAAGGAACTCTTGGATATTTGGACCCAGAATACTTGTTAACCAGTGAGTTGACGGAAAAGAGCGATGTGTACAGCTTCGGAATAGTGCTTCTAGAGCTTATAACTGGGAAGAAGGCAGTGAGTTTCGAGGGGTCAGAAGTGGAGAGGAATCTAGCTATGTACGTGATGTGTGCAATGAAGGAAGATCGTTTGACAGAAGTTGTGGAGAAGGGAATAGCGACCGAAGCAAACTTTGAGCAGATAAAACAAGTGGCGAAGTTGGCGACAAAGTGTTTGAGAATAAGGGGGGAGGAGCGGCCTAGCATGAAGGAGGTGGCCATGGAGTTGGAGGGGCTGAGAGGGTTGATCGAGGCTAATGAGAAATTAGGGAGCACAGGAGAGGGCATGGTGGGTTATTTGGTGCCATCCAATGGAGCTTCAGAATCCATATTCAACCAATTTACTGCGAGTGGGAGCACAAATATTGTTGATGATAGTATGAAGGTTCACATTTTGCCACTGATCCATAATGGAAGATGATAAATTGTTGGATTAAGCTGATTTTTTTTTTTCATAAGGCATTTAATGTCAATTGTAGTACAAATTGCGTATATTTGGAGTTCTAATTAACTCCAAACTTTCATGGAGCACATTATTTGGT 2437 42.84 MGRPTETLIRLTAVKILAILLSAFVVVTATTNTTATVASQALPGCDEWCGDLQIPYPFGTREGCYLNERFFINCSTTRQDSPKAFLRGGSVPVTNISISGELQILNLVAQECHPPKIGPDVFSNVFLDLSYIISRTKNKFIAMGCNTFAHIFGRDIKGQSFRTACVALCDDIGSVKDGACSGNGCCQLEIPSNLNHLEFTVSSLNNDVNVSSFNPCGYAFLVEQNSFNFSSKYIRNFPENRVLAVLDWAISNDTCVTAENKTNCICGRNSTKVDLLDDPSRYRCQCLEGFEGNPYLPEGCQDIDECKDESLNDCSFECVNRIGNYTCNCPKGFKGDGRRGGEGCTRESKSFVQIIVGLTVGFAVLVIASTWLYLGYRKWKFIKLKEKFFEKNGGLMLQQHLSQWQTSTDMVRIFTREELDKATNKYDESAVVGKGGYGTVYKGVLDDGSVVAIKKSKLVDQSQTSQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLYEYVHDKTSDRHTLSWEARLRIASETAGVISYLHSSASTPIIHRDIKTTNILLDHNYTAKVSDFGASKLVPVDQTQLSTMVQGTLGYLDPEYLLTSELTEKSDVYSFGIVLLELITGKKAVSFEGSEVERNLAMYVMCAMKEDRLTEVVEKGIATEANFEQIKQVAKLATKCLRIRGEERPSMKEVAMELEGLRGLIEANEKLGSTGEGMVGYLVPSNGASESIFNQFTASGSTNIVDDSMKVHILPLIHNGR 760
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 46165461 46168999 - XM_039028379.1 Bhi04g01850 33459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01850 760 Pfam Protein tyrosine and serine/threonine kinase 431 697 IPR001245 GO:0004672|GO:0006468
Bhi04g01850 760 SUPERFAMILY EGF/Laminin 301 337 - -
Bhi04g01850 760 ProSiteProfiles EGF-like domain profile. 302 336 IPR000742 -
Bhi04g01850 760 Gene3D Plasmodium vivax P25 domain 245 351 - -
Bhi04g01850 760 SUPERFAMILY Protein kinase-like (PK-like) 404 697 IPR011009 -
Bhi04g01850 760 CDD EGF_CA 302 336 - -
Bhi04g01850 760 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 705 IPR045274 GO:0007166
Bhi04g01850 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Bhi04g01850 760 Gene3D Transferase(Phosphotransferase) domain 1 502 711 - -
Bhi04g01850 760 ProSitePatterns Calcium-binding EGF-like domain signature. 302 327 IPR018097 GO:0005509
Bhi04g01850 760 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 28 705 - -
Bhi04g01850 760 SMART egf_5 254 301 IPR000742 -
Bhi04g01850 760 SMART egf_5 305 345 IPR000742 -
Bhi04g01850 760 ProSitePatterns Protein kinases ATP-binding region signature. 432 455 IPR017441 GO:0005524
Bhi04g01850 760 ProSiteProfiles Protein kinase domain profile. 426 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01850 760 Pfam Wall-associated receptor kinase galacturonan-binding 45 100 IPR025287 GO:0030247
Bhi04g01850 760 Gene3D Phosphorylase Kinase; domain 1 397 501 - -
Bhi04g01850 760 SMART serkin_6 426 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01850 760 CDD STKc_IRAK 432 700 - -
Bhi04g01850 760 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 318 329 IPR000152 -
Bhi04g01850 760 SMART egfca_6 302 345 IPR001881 GO:0005509
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01848 Bhi-Chr4:45986355 Bhi04g01850 Bhi-Chr4:46165461 0 dispersed
Bhi04g01850 Bhi-Chr4:46165461 Bhi04g01853 Bhi-Chr4:46490803 0 dispersed
Bhi04g01849 Bhi-Chr4:46101641 Bhi04g01850 Bhi-Chr4:46165461 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87701 PF07714 PK_Tyr_Ser-Thr 1.00E-48 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01850 - - csv:101209870 1178.31