Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01853 TTGGTAATTAAAATTATGATGATTATGTTATCAACAACCTCAACCGTCATAGTAATAGCTTCGTCACAAGCCTTAGCCGGCTGTGACGAATGGTGTGGAGACTTGCAAATTCCATATCCATTCGGAGTAAAAGAAGGGTGCTATCTCAACAAAACCTTCTTAATTACGTGCAACAAAACCAATGGCCCTCCAAAAGCGTTTCTAATGAACACCAATATTAGTGTTACTAATATATCACTCCACGGTGAGCTCCACATATTGCAGCCCATAGTGCGAGATTGCTACAACCAAGTGCAAGAAAATGGTCCTTTTGTCCCTAACACAACCAATCTTTTGGCACCGGCGATGTTCCCAATTGCTGATGGCAAAAACAAGTTCATAGCCATTGGTTGCGATACTTATGGTTTAATTGGTGGGGTGTTAAATGGGAGTGGCTATGTAAGTGGGTGTATTTCCATGTGTTTAAATGAGAGTACGATTGGTAATGATTCGTGTTTTGGTAATGGGTGTTGTCAAATGGAGATTCCTAATGGGTTGAGGAATTTGACTTTGTTAGTGGGGAGTTTTTTTAATCATACTTTGGTGAAGAATTTTAATCCTTGTGGGTATGCTTTTGTGGTTGGAGATGAGGGGTTTGAGTTTGAGTCAAGGTATATTAGAAGTTTTGAAGATGTGAAGGTTGAGGTTGTGGTTGGTTGGGCTATTGGAAATGACAGTAATTATGTGTGTGGATTAAACAGTGAAAGGAATAGCAGTTTCTCTCATGATAGAGCTGAATTTCGTTGCCAATGCTTGGATGGTTTTGAAGGGAATCCATATCTTCCTCAAGGTTGTCAAGATATAGATGAATGCAAGGATGAAACACTGAATCATTGTAAGTACAAGAACAAGTGTGTTAACACAATAGGAAACTATACGTGCAATTGTCCTACAAACTACAAAGGAGATGCAAGATATGGAGGAGAAGGTTGCACTCGAGATTCCAAGGCTTTCATTCCCATAATAATCGGAATTGGAGTAGGGTTCACAGTTTTTCTAATTGGTAGCACATGGATATTCTTGGGTTATAAAAAGTGGAAGTTCATCAAAAGGAAAGAGAAATTTTTCATAGAAAATGGAGGCTTCATACTTCAACAACAACTTTCTCAATGGCAATCCCCCAATGAAATGGTTAGAATTTTCACCCAAGAAGAGTTGGAGAAGGCCACAAATAACTATGACAATAGCACTATTGTTGGTAAAGGTGGGTACGGTACCGTTTACAAAGGAGTCTTAGAAGATGGCTTGGTAGTGGCAATCAAGAAATCAAAAATTGTAGACCAATCTCAAACTGACCAATTCATTAACGAAGTCATTGTTTTGTCTCAAATCAACCATCGCAATGTTGTTAGGCTCTTGGGGTGTTGTTTAGAGACACAAGTTCCGTTGTTGGTGTACGAGTTCGTAACCAATGGCACCCTCTTTGAACACATCCATGACAAAACCAAGCATGCTTCTCTTTCATGGGAAGCTCGTTTGAAAATAGCTTTGGAGACTGCAGGTGTGCTTTCGTATTTGCATTCATCAGCTTCGATTCCAATTATTCATAGAGATATCAAGACGACCAACATACTCCTAGACGATAATTACACCGCGAAAGTGTCTGATTTCGGGGCATCAAAGTTGGTTCCAATGGATCAAACACAGCTATCCACGATGGTGCAAGGGACTCTAGGGTATTTAGACCCTGAGTACTTGTTGACGAGTGAGTTGACAGAAAAGAGTGACGTGTATAGCTTTGGAATAGTGTTGTTAGAGCTTATAACTGGGAAGAAGGCGGTGTGTTTTGATGGACCAGAAGCGGAGAGGAATCTAGCGATGTATGTGCTTTGTGCAATGAAGGATGGTCGGTTGGAAGAAGTTGTAGAAAGGGGAATGATGGCGAAAGAGATAAATTTTGAGGAAATAAAAGAAGCGGCTCAGGTAGCAAAGAAATGCTTAAGAATTAAAGGGGAGGAGCGACCCAGCATGAAGGAAGTGGCTATGGAGTTGGAGGGAGTGCGATTGAAGCAAGTTCAGCATTCATGGGTGAATAACAACAATTTGTCCAACGAAGAGGAAATGGTATGTTTATTGGATGTTGAAGCTTCAGACTCCGGCCATTTTATTGTTAGTGGCACTATGAATACTACCGTCGGGGATAGCATAAAAGCTTCAATTTTGTCACACATCCACCATGGAAGATGA 2226 40.52 MMIMLSTTSTVIVIASSQALAGCDEWCGDLQIPYPFGVKEGCYLNKTFLITCNKTNGPPKAFLMNTNISVTNISLHGELHILQPIVRDCYNQVQENGPFVPNTTNLLAPAMFPIADGKNKFIAIGCDTYGLIGGVLNGSGYVSGCISMCLNESTIGNDSCFGNGCCQMEIPNGLRNLTLLVGSFFNHTLVKNFNPCGYAFVVGDEGFEFESRYIRSFEDVKVEVVVGWAIGNDSNYVCGLNSERNSSFSHDRAEFRCQCLDGFEGNPYLPQGCQDIDECKDETLNHCKYKNKCVNTIGNYTCNCPTNYKGDARYGGEGCTRDSKAFIPIIIGIGVGFTVFLIGSTWIFLGYKKWKFIKRKEKFFIENGGFILQQQLSQWQSPNEMVRIFTQEELEKATNNYDNSTIVGKGGYGTVYKGVLEDGLVVAIKKSKIVDQSQTDQFINEVIVLSQINHRNVVRLLGCCLETQVPLLVYEFVTNGTLFEHIHDKTKHASLSWEARLKIALETAGVLSYLHSSASIPIIHRDIKTTNILLDDNYTAKVSDFGASKLVPMDQTQLSTMVQGTLGYLDPEYLLTSELTEKSDVYSFGIVLLELITGKKAVCFDGPEAERNLAMYVLCAMKDGRLEEVVERGMMAKEINFEEIKEAAQVAKKCLRIKGEERPSMKEVAMELEGVRLKQVQHSWVNNNNLSNEEEMVCLLDVEASDSGHFIVSGTMNTTVGDSIKASILSHIHHGR 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 46490803 46504125 + XM_039030540.1 Bhi04g01853 33462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01853 736 Gene3D Phosphorylase Kinase; domain 1 372 476 - -
Bhi04g01853 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Bhi04g01853 736 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 293 304 IPR000152 -
Bhi04g01853 736 Pfam Wall-associated receptor kinase galacturonan-binding 23 77 IPR025287 GO:0030247
Bhi04g01853 736 Pfam Calcium-binding EGF domain 275 309 IPR001881 GO:0005509
Bhi04g01853 736 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 14 697 - -
Bhi04g01853 736 ProSiteProfiles EGF-like domain profile. 275 311 IPR000742 -
Bhi04g01853 736 Gene3D Transferase(Phosphotransferase) domain 1 477 698 - -
Bhi04g01853 736 ProSitePatterns Calcium-binding EGF-like domain signature. 275 302 IPR018097 GO:0005509
Bhi04g01853 736 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 697 IPR045274 GO:0007166
Bhi04g01853 736 Gene3D Laminin 233 318 - -
Bhi04g01853 736 SUPERFAMILY Protein kinase-like (PK-like) 379 672 IPR011009 -
Bhi04g01853 736 CDD STKc_IRAK 407 674 - -
Bhi04g01853 736 CDD EGF_CA 275 311 - -
Bhi04g01853 736 ProSiteProfiles Protein kinase domain profile. 401 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01853 736 ProSitePatterns Protein kinases ATP-binding region signature. 407 430 IPR017441 GO:0005524
Bhi04g01853 736 SMART serkin_6 401 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01853 736 SUPERFAMILY EGF/Laminin 274 311 - -
Bhi04g01853 736 Pfam Protein kinase domain 401 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01853 736 SMART egfca_6 275 320 IPR001881 GO:0005509
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01849 Bhi-Chr4:46101641 Bhi04g01853 Bhi-Chr4:46490803 0 dispersed
Bhi04g01850 Bhi-Chr4:46165461 Bhi04g01853 Bhi-Chr4:46490803 0 dispersed
Bhi04g01853 Bhi-Chr4:46490803 Bhi11g02012 Bhi-Chr11:57260631 5.85E-95 dispersed
Bhi04g01853 Bhi-Chr4:46490803 Bhi04g01854 Bhi-Chr4:46523176 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87702 PF00069 Pkinase 2.70E-48 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01853 - - csv:101209380 1253.43