Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01854 AATAAGAAAAATTAAAGCTTGAAAGGTCTAACGTTGAAAAAGCTTCCATCATCCCAGCATCTCTTTAAACATAGTTTAAATTCTCATCCAATATCTTAATTACACCAATAATCCCCACTGAAATTGTTGTGTTCTGTGTCAGATTTAAGATGAAGCGTTGGAGGAAGACGCTTGTGGGTCTCATGTTGATCATAAAGATCGCCATATTATCAACAGCCGTAGTAGCATCGTCACAAGCCTTAGCCGGCTGTGACGAATGGTGTGGCGACTTACGAATTCCCTATCCATTCGGAGTAAAACAAGGATGTCATCTCAACCAAACATTCTTAATTACATGCAACAAAACCAATAGCCCTCCGAAGGCGTTTCTAATGGACACCGACATTAGCGTTACCAATATATCACTCCACGGTGAGCTCCACATATTGCAGCCCATAGTTCGATATTGCTACGAGCAAGTGCAAGTAAGTGATCCTTTTATCCCCAACGCAACCAATCTTTCAGTGCCGGCGGCGTTGCCGATTGCTGATGGCAAAAACAAGTTCATCGCCACGGGCTGCAATACTTTTGGTTTATTCAGCGGGATGCTAAAGGGAAGTGAATTTCTAAGTGGGTGTATTTCGGTATGTACAAATGGTAGTGCTATAGTTGATGGGTCTTGCTTTGGGAATGGATGCTGTGAGTTGGAGATTCCAAAGGGGTTAACGAATTTGAGTCTGTTTGTGGGTCAACTGTTGCCTAATGAAACTAATATCCTCAAGTATAATCCATGTGGTTATGCTTTTGTGGTTGGAGATGAGAGGTTCAAGTTTGACTCAACATATATTCAGAGATTTGAAGATGAGGAAGTTGAGGTTGTGGTTGATTGGGCCATTGGAAACCAAACAATGAATGTTTGTAGACAAAATAGCCAAAGGATTAGTAACTTCTCTGATGATGGATCTCAATATCGTTGCGAATGTTTGGATGGTTTCATGGGAAATCCGTATCTCCCTCAAGGATGTGAAGATATAGATGAATGCAAGGATGAAAAGCTGAATAAGTGCAAGTACGAGTGTATTAACACAATAGGAAACTACACGTGCAAATGTCCTAAAAACTTTAAAGGAGATGGGAGACATGGGGGAGAAGGTTGCACTCGAGATTCCAAGGCTTTCATTCCCATAATAATTGGAATTGGAGTAGGGTTCATAGTTTTTCTAATTGGTAGCACATGGATATTCTTGGGTTATAAAAAGTTGAAGTTCATCAAAAGGAAAGAGAAATTTTTCATAGAGAATGGAGGCTTCATACTTCAACAGCAACTTTCTCAATGGCAATCCCCCAATGAAATGGTTAGAATTTTCACCCAAGAAGAGCTGGAGAAGGCCACAAACAACTATGACAATAGCACTATTGTTGGTAAAGGTGGGTTCGGTACTGTTTACAAAGGAGTCTTCGAAGATGGCTTGGCAGTGGCAATCAAGAAATCGAAAATTGTAGACCAATCCCAAACTGACCAATTCATTAACGAAGTCATTGTTCTGTCTCAAATCAACCATCGCAACGTTGTTAGGCTCTTGGGGTGTTGTTTAGAGACACAAGTTCCGTTGTTGGTGTATGAGTTCGTAACCAACGGCACCCTCTTTGAACACATCCATGACAAAACCAAGCATGCTTCTCTTTCATGGGAAGCTCGTTTGAAAATAGCTTTGGAGACTGCAGGTGTGCTTGCGTATTTGCATTCTTCAGCTTCGATTCCAATTATTCATAGAGATATCAAGACAACCAACATACTCCTAGACGATAATTACACTGCGAAAGTGTCTGATTTCGGGGCGTCAAAGTTGGTTCCAATGGATCAAACACAGCTATCCACAATGGTGCAAGGGACTCTAGGGTATTTAGACCCTGAGTACTTGTTGACGAGCGAGTTGACGGAGAAGAGCGACGTGTATAGTTTTGGAATAGTGTTGTTAGAGCTTATAACTGGGAAGAAGGCGGTGTGTTTCGATGGGCCAGAAGCAGAGAGGAATCTAGCAATGTACGTGCTTTGCACAAAGGATGATCTGTTGGAAGAAGTTGTAGATAGGGGAATGATGGTGAAAGAAACAAATTTTGAGGAAATAAAAGAAACAGCTAAGATAGCAAAGAAATGCTTAAGAATTAAAGGGGAGGAGCGACCTAGCATGAAGGAAGTAGCTATGGAGTTGGATGGAGTTCGATTAATGCAAGTTCAACGTTCATGGGTTGATAACAATAGTTTGTCGAACGCAGAGGAAAGGGTATGTTTGTTGGATGTTGAAGCTTCAGACTCCAGCCATTTTATTGCGAGTGGCACTATGAATAATACCGTCGGGGATAGCATAAAAGCTTCGATTTTGTCACATATCCACCATGGAAGATGATTTTATTTTAGTTATATGCTTCCTTAAATATAATATAAATGTTCAATCAAGTATCGATGTATAATCTATTAGATTACTTTTGTAATAGTTTTCTGATTTTTTTTTCTTTTTTTGGCAATATTGTTTGTAACCAGATTAGAAATGTGTGCAATGCCACACATCATTGTGAAACATGATATTGTTGTTGTATGTATGCTTAA 2587 40.01 MKRWRKTLVGLMLIIKIAILSTAVVASSQALAGCDEWCGDLRIPYPFGVKQGCHLNQTFLITCNKTNSPPKAFLMDTDISVTNISLHGELHILQPIVRYCYEQVQVSDPFIPNATNLSVPAALPIADGKNKFIATGCNTFGLFSGMLKGSEFLSGCISVCTNGSAIVDGSCFGNGCCELEIPKGLTNLSLFVGQLLPNETNILKYNPCGYAFVVGDERFKFDSTYIQRFEDEEVEVVVDWAIGNQTMNVCRQNSQRISNFSDDGSQYRCECLDGFMGNPYLPQGCEDIDECKDEKLNKCKYECINTIGNYTCKCPKNFKGDGRHGGEGCTRDSKAFIPIIIGIGVGFIVFLIGSTWIFLGYKKLKFIKRKEKFFIENGGFILQQQLSQWQSPNEMVRIFTQEELEKATNNYDNSTIVGKGGFGTVYKGVFEDGLAVAIKKSKIVDQSQTDQFINEVIVLSQINHRNVVRLLGCCLETQVPLLVYEFVTNGTLFEHIHDKTKHASLSWEARLKIALETAGVLAYLHSSASIPIIHRDIKTTNILLDDNYTAKVSDFGASKLVPMDQTQLSTMVQGTLGYLDPEYLLTSELTEKSDVYSFGIVLLELITGKKAVCFDGPEAERNLAMYVLCTKDDLLEEVVDRGMMVKETNFEEIKETAKIAKKCLRIKGEERPSMKEVAMELDGVRLMQVQRSWVDNNSLSNAEERVCLLDVEASDSSHFIASGTMNNTVGDSIKASILSHIHHGR 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 46523176 46526222 + XM_039030661.1 Bhi04g01854 33463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01854 745 SMART egfca_6 287 330 IPR001881 GO:0005509
Bhi04g01854 745 SUPERFAMILY Protein kinase-like (PK-like) 389 680 IPR011009 -
Bhi04g01854 745 CDD STKc_IRAK 417 683 - -
Bhi04g01854 745 Gene3D Laminin 245 329 - -
Bhi04g01854 745 Gene3D Transferase(Phosphotransferase) domain 1 487 704 - -
Bhi04g01854 745 CDD EGF_CA 287 321 - -
Bhi04g01854 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Bhi04g01854 745 ProSiteProfiles EGF-like domain profile. 287 324 IPR000742 -
Bhi04g01854 745 Pfam Protein tyrosine and serine/threonine kinase 416 681 IPR001245 GO:0004672|GO:0006468
Bhi04g01854 745 ProSitePatterns Calcium-binding EGF-like domain signature. 287 312 IPR018097 GO:0005509
Bhi04g01854 745 SMART serkin_6 411 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01854 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 702 IPR045274 GO:0007166
Bhi04g01854 745 Gene3D Phosphorylase Kinase; domain 1 379 486 - -
Bhi04g01854 745 SUPERFAMILY EGF/Laminin 287 322 - -
Bhi04g01854 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 20 702 - -
Bhi04g01854 745 ProSiteProfiles Protein kinase domain profile. 411 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01854 745 Pfam Wall-associated receptor kinase galacturonan-binding 34 88 IPR025287 GO:0030247
Bhi04g01854 745 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Bhi04g01854 745 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Bhi04g01854 745 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 303 314 IPR000152 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01854 Bhi-Chr4:46523176 Bhi11g02012 Bhi-Chr11:57260631 2.52E-91 dispersed
Bhi04g01853 Bhi-Chr4:46490803 Bhi04g01854 Bhi-Chr4:46523176 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87703 PF07714 PK_Tyr_Ser-Thr 4.10E-48 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01854 - - csv:116404729 1151.73