Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01874 GATGTCGGGCTTGCGAGAAGGAGAGCTGGTGATTGCCTCGTGGCTTCCACTCAAATATTCGTACGGTGACTTCATTACACACAGAGACAGAGGCGGAGGGGCCACGAACAAGAAGAAGAACTTCTGATATTTTCTTCTTATTAATTTTAGAAAATTGTTTTCCTGAAGCTTTTTGTTTCATGTTTATGCTTCAATTGCAATTGGAATTACATTAATTTTTTGTTTTCTTCATTCCTGCTCGCTTTTGCTTTCAAGAATATTCTGTTGAAGAGAAATTCTCACGCTTTCTTTACTTTTTTGATCTGGGATCGGAGTTCGTAGCTTAAATTTTGATCCCATTGTTTCAAAATTTGTGATTGCGTCTGCAATGGACGAGTTTGGGGTATTAACCGAAAGATATGGATTGAAACCGCAAGGAAAATCGGCTCCAATGGCTGCATCTAAGCCAACTGCCTCTTCAAACACCTTCCAGTCTCGGAATTCCGGGTTTAATTCTGGTTTCAATGGCAAGTCCTCCTTCGATTCTGGTTTTGGTGACCTATCTTTTCAAAAGAACACTAAACCCGACTCTTACGATGATTTTTTCGGGAGTCTCAATCAGTCAACGAAACATTCGGGGAATCCTGGAAGTTCTCCGTCTTCTTTTGACTACGATTCGATATTTTTTGGGTCGAAGAATTCAGATCCAAGCTATGATGATGTTTTTGATGGGATTCCTGGATTCAAGAGCTCGGTTACAGCGAAGAAGGAGGATCCGGTCCGATCATTCCCCTCGTCTTTGAATCAAACCTCTCAAATTGATGATTTGTTTGGTGATTTTAGCAGCAATGTGGCAAAAACAACTCCGAAGCCCAACGGATTAAAAAATGCAGCAAATAACGCAGCCCCTTTTGATGGATTGATTTCTGGCTTTGGTGATGGCAATTCTCGAATTAACAGAGCAAGTATGCAGGACAGTCTGACTCCGCCATCAACGTCTCATACTAAATCAACTTTTAGTTCAGCCAAAGATCCTTTTATAGAACTAGAATCAGCTTCTTATAATTCATCTGAGGCTTTTCCAGATCCGCTTGAGGAAACTGCCAAGTTCAATAATTCTGGAGGTACAAAATTTGACAGCTCCTCCAATTCTTCCCCACCATTCAGGGTTCCTCCAGTACCAAAGCCAGGTCATAAGGCAGTTAAAGTTAAGAGCTCCTCTTCCTCTCCTATAGAGGAATTGGAGGACTTTGCAAAGGGGAAGGTGCGGAATAACAGTGAAGGGAAAGTGGATGCCTCGACACGCACAACAAATAGAACTAGTAAAGATGCACATGCTGCAGGAGTAGATCATCAACAGACTATTGACGATCTGGACTCCTTTTTCAATGTGGGTCCTCGATCAAAGAGTGCTCCAAGGTCACGAACAACAACTTTGGATCCTCTATTTGAAGTTCCTAAATACAACAAACCACCTGAAATACCCAAACCTGCTCCTTCGGCAGTTTTGTCCCACATAAAGAAATCTTCTTCTGCTGTAAATCTTGTGGATGATTTTTTTTTCGGAGATGCTCCTTCATTTGGACATTTTGAAGAAGTTGACGGAGAGAGTGAAGAAAGAAGAAGAGCTAGACTGAGGCGTCTACAGAGGACCCAAGAGCGTGCAGCCAGAGCAGTGGCTGATTTGAATCAGCGTGACTTTCAAACACAGCACGAGCAAGAAGAGAAGCGTAGGATTGCTGAATCTTTAGATATTGATATCAAGCGCTGGGCTGCTGGGAAGGAAGGCAACATGCGTGCACTTTTATCATCATTGCAATATGTTCTATGGTCCGGAAGTGGTTGGGAGCCAGTTTCATTGACAGAGATGATTACTTCAACCTCAGTTAAAAAAGTTTATAGGAAGGCAGTCTTGTGCATTCATCCAGATAAGGTTCAACAGAAGGGTGCCAGTATTGAACAGAAATATACAGCAGAGAAGGTTTTTGATATCCTTAAGGAAGCCTGGAATAAATTCAGCAAAGAGGAACTTTAGACACACCTCGGATGATTGTTTTCTTCAACTACCATGTCACTTGTAAACTATGAATATCCTAATCATGGAGAGACGACAAGACTAGCGTGGCAAAGTCTGTCTGCTGTCTGCAGGTCAGTCTTGAGGCCGTCTGGTGACCGATATCATGTTCAACATGTTCTCAGAGAAAGATCTAATAGGTCGTGAATGCTTGACATTGGGGTAATACCAGAAATTTGTATTCCATAGGCTAAAGCATAGTTTCATACCCAATTGATGTTGTGATTTATATGGTTTCACAATCAAATAGTGCTCATAATTCTTTAAATTTGTGCCAGATTCATTGCTTTTGTAGAGTTTTATTTCTTCTATTTTCTTCTTTCTTTCTCCTGGAAGGAGTTGTGGATTAAAAGTTGGAACATCTTTTTTTTTATCTTTGTTTTGTAAACCGTACTTGGTGAAGTGTA 2460 41.1 MDEFGVLTERYGLKPQGKSAPMAASKPTASSNTFQSRNSGFNSGFNGKSSFDSGFGDLSFQKNTKPDSYDDFFGSLNQSTKHSGNPGSSPSSFDYDSIFFGSKNSDPSYDDVFDGIPGFKSSVTAKKEDPVRSFPSSLNQTSQIDDLFGDFSSNVAKTTPKPNGLKNAANNAAPFDGLISGFGDGNSRINRASMQDSLTPPSTSHTKSTFSSAKDPFIELESASYNSSEAFPDPLEETAKFNNSGGTKFDSSSNSSPPFRVPPVPKPGHKAVKVKSSSSSPIEELEDFAKGKVRNNSEGKVDASTRTTNRTSKDAHAAGVDHQQTIDDLDSFFNVGPRSKSAPRSRTTTLDPLFEVPKYNKPPEIPKPAPSAVLSHIKKSSSAVNLVDDFFFGDAPSFGHFEEVDGESEERRRARLRRLQRTQERAARAVADLNQRDFQTQHEQEEKRRIAESLDIDIKRWAAGKEGNMRALLSSLQYVLWSGSGWEPVSLTEMITSTSVKKVYRKAVLCIHPDKVQQKGASIEQKYTAEKVFDILKEAWNKFSKEEL 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 47157071 47163192 + XM_039029365.1 Bhi04g01874 33483

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01874 548 MobiDBLite consensus disorder prediction 23 41 - -
Bhi04g01874 548 MobiDBLite consensus disorder prediction 71 91 - -
Bhi04g01874 548 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 295 - -
Bhi04g01874 548 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 315 548 - -
Bhi04g01874 548 SUPERFAMILY Chaperone J-domain 401 547 IPR036869 -
Bhi04g01874 548 MobiDBLite consensus disorder prediction 175 213 - -
Bhi04g01874 548 MobiDBLite consensus disorder prediction 240 257 - -
Bhi04g01874 548 MobiDBLite consensus disorder prediction 225 319 - -
Bhi04g01874 548 MobiDBLite consensus disorder prediction 300 314 - -
Bhi04g01874 548 ProSiteProfiles dnaJ domain profile. 484 548 IPR001623 -
Bhi04g01874 548 MobiDBLite consensus disorder prediction 1 41 - -
Bhi04g01874 548 MobiDBLite consensus disorder prediction 285 299 - -
Bhi04g01874 548 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 315 548 - -
Bhi04g01874 548 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 295 - -
Bhi04g01874 548 Coils Coil 416 436 - -
Bhi04g01874 548 Gene3D DnaJ domain 419 547 IPR036869 -
Bhi04g01874 548 MobiDBLite consensus disorder prediction 186 213 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01874 - - - csv:101222270 863.218
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02742 Bhi-Chr3:69611605 Bhi04g01874 Bhi-Chr4:47157071 1.08E-12 dispersed
Bhi04g01874 Bhi-Chr4:47157071 Bhi09g02158 Bhi-Chr9:60912019 1.67E-53 dispersed
Bhi04g01874 Bhi-Chr4:47157071 Bhi08g02029 Bhi-Chr8:58611704 1.40E-34 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g224 Blo01g01553 . . . . Bpe04g00208 . . Cmo04g02503 Cmo15g00664 . . . . Sed01g3080 . . Bhi04g01874 Tan11g1245 Cmetu03g1597 . Hepe02g2217 . Lcy10g1250 Cla08g00620 Cam08g1034 Cec08g0623 Cco08g0735 Clacu08g0744 . Cre08g0552 . . Cone17ag0822 . . . . Cme03g00497 . . . Bda13g01471 . Bpe14g00394 . Bma02g00207 . . . . . Car04g02309 Car15g00604 Cpe01g02071 . . . . . . . . . . . . . . . Lsi08g00460 . Chy03g00758 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006624 1 1 1 1 1 1 3 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 2 1 1 1 2 2 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g01874 Bhi_Chr04 FPKM 1.233053 1.429254 2.598171 2.291967 3.187784 3.783422 3.884567 4.376318 3.832591 4.927187