Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi04g01902 | TTGAAAGAGAGAGATAAGTGGTTGTTGTACCAATGGGGTATAGAGAATCTATAGAAAGATCTCAAGCATGAGAGAAAATACAAACCCTCTCAACACACACACATGACATCTACTATACTTCTTCTCTAACTATTCTTTAGCTTCCTTTTCTTTTTTTTCTCTCCTCACCCACTTGTTCATAAAATCCTCCAATATTACCACACCCACCACCCCTCCCATTTTTGCTTCCTTCTCTTCCTCTATAATGTCAAAGTTACCATTATTATTGTGAGATTTTGAAAAATATAAATCAAAATCATCTTTCTTGATCTTTCAAGAGGCTTCTTGAGGAGAAATGGAAACAGAAGTAAGGGAAGTACAACACCATTTCCATGTATTGGCTGTGGATGATAGTCTTATAGATAGAAAGCTTTTGGAAAAGCTCTTAACAATTTCTTCATGTGAAGCAGTTACTTGTGTGGAGTCTGGTGATAAAGCTCTTAGATATTTGGGTCTTCTTGATGATCTTGATAAATTTTCTTCTTCTGCTGCTGCTAATTCTTTTTCTTCCTCACAACTCTCCCAACAACAGGAAGTCAAAGTCAACCTAATCATGACAGATTATTGTATGCCTGGGATGAGTGGTTATGATCTACTCAAACGACTCAAGGGATCTTATTGGAAGGATATTCCTGTTGTTGTGATGTCATCAGAGAATGAGCCTTCAAGAATCAATATGTGTTTGGAAGAAGGAGCAGAGGAATTCCTTCTAAAGCCTCTTCAACTATCAGATGTCAAGAAACTTGAGCCTCACCTTCAAAAATCCCTCACTCTTTGTTCTGCAGATCAAGTCAAAGAAGAAGAAACAACACTCGCAATCGAAATTGGAATCACCGACGACGAAAATAACTCGAAATTAGAAGGGAGTAAGAAGAATGAAAATAGCATTAATAATAGTTTGAGCAAGAGAAAGGCAGCGACTCCAGAACATTGTGAAGAAAGACGGCCAAAACTGAAAGAATTGCAAGCTGGAGTATGAAGAAATGGGGGCATTGGCATTTCGTCGAACACCTTTGCTGAAATAATTTGGAGTTACAGCGGCGTATTGATATATAGAGAGAGATTTTCAGGTGGAAAAAGGGGAATTTGGAGATGTAAAATGGATTGTTATTTTGTAATTTCTTTGGTGGTCTTTGATAATGAATACCTTTTGTGTTGTTAGATGGATGAAGATGGAGGAAAATCTCCCAAAATTGGGATGTTTTTGGAGGCCAATCGGTTAATAATTCTAATTTAAATATCAATTTTTTCTTTACAACGCGAGAGAGGGATCGAACCTGACGTTGACGTCGAGGTTG | 1337 | 37.47 | METEVREVQHHFHVLAVDDSLIDRKLLEKLLTISSCEAVTCVESGDKALRYLGLLDDLDKFSSSAAANSFSSSQLSQQQEVKVNLIMTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSDVKKLEPHLQKSLTLCSADQVKEEETTLAIEIGITDDENNSKLEGSKKNENSINNSLSKRKAATPEHCEERRPKLKELQAGV | 227 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 47946794 | 47950954 | - | XM_039028410.1 | Bhi04g01902 | 33511 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi04g01902 | 227 | MobiDBLite | consensus disorder prediction | 191 | 206 | - | - | |
| Bhi04g01902 | 227 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 7 | 224 | IPR045279 | GO:0009736 | |
| Bhi04g01902 | 227 | Pfam | Response regulator receiver domain | 73 | 148 | IPR001789 | GO:0000160 | |
| Bhi04g01902 | 227 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ORR4 | 7 | 224 | - | - | |
| Bhi04g01902 | 227 | SUPERFAMILY | CheY-like | 12 | 149 | IPR011006 | - | |
| Bhi04g01902 | 227 | CDD | REC_typeA_ARR | 14 | 150 | - | - | |
| Bhi04g01902 | 227 | SMART | REC_2 | 12 | 151 | IPR001789 | GO:0000160 | |
| Bhi04g01902 | 227 | ProSiteProfiles | Response regulatory domain profile. | 13 | 155 | IPR001789 | GO:0000160 | |
| Bhi04g01902 | 227 | Gene3D | - | 13 | 223 | - | - | |
| Bhi04g01902 | 227 | MobiDBLite | consensus disorder prediction | 184 | 227 | - | - | |
| Bhi04g01902 | 227 | MobiDBLite | consensus disorder prediction | 207 | 227 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi04g01902 | Bhi-Chr4:47946794 | Bhi12g01132 | Bhi-Chr12:33965684 | 4.68E-57 | dispersed | |
| Bhi04g01902 | Bhi-Chr4:47946794 | Bhi04g01903 | Bhi-Chr4:47946795 | 6.51E-166 | tandem |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 1014 | PF00072 | Response_reg | 3.30E-15 | CL0304 | Bhi | TR |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi04g01902 | K14492 | - | csv:101216267 | 338.961 |