Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi04g01903 | AAAGAGAGAGATAAGTGGTTGTTGTACCAATGGGGTATAGAGAATCTATAGAAAGATCTCAAGCATGAGAGAAAATACAAACCCTCTCAACACACACACATGACATCTACTATACTTCTTCTCTAACTATTCTTTAGCTTCCTTTTCTTTTTTTTCTCTCCTCACCCACTTGTTCATAAAATCCTCCAATATTACCACACCCACCACCCCTCCCATTTTTGCTTCCTTCTCTTCCTCTATAATGTCAAAGTTACCATTATTATTGTGAGATTTTGAAAAATATAAATCAAAATCATCTTTCTTGATCTTTCAAGAGGCTTCTTGAGGAGAAATGGAAACAGAAGTAAGGGAAGTACAACACCATTTCCATGTATTGGCTGTGGATGATAGTCTTATAGATAGAAAGCTTTTGGAAAAGCTCTTAACAATTTCTTCATGTGAAGTTACTTGTGTGGAGTCTGGTGATAAAGCTCTTAGATATTTGGGTCTTCTTGATGATCTTGATAAATTTTCTTCTTCTGCTGCTGCTAATTCTTTTTCTTCCTCACAACTCTCCCAACAACAGGAAGTCAAAGTCAACCTAATCATGACAGATTATTGTATGCCTGGGATGAGTGGTTATGATCTACTCAAACGACTCAAGGGATCTTATTGGAAGGATATTCCTGTTGTTGTGATGTCATCAGAGAATGAGCCTTCAAGAATCAATATGTGTTTGGAAGAAGGAGCAGAGGAATTCCTTCTAAAGCCTCTTCAACTATCAGATGTCAAGAAACTTGAGCCTCACCTTCAAAAATCCCTCACTCTTTGTTCTGCAGATCAAGTCAAAGAAGAAGAAACAACACTCGCAATCGAAATTGGAATCACCGACGACGAAAATAACTCGAAATTAGAAGGGAGTAAGAAGAATGAAAATAGCATTAATAATAGTTTGAGCAAGAGAAAGGCAGCGACTCCAGAACATTGTGAAGAAAGACGGCCAAAACTGAAAGAATTGCAAGCTGGAGTATGAAGAAATGGGGGCATTGGCATTTCGTCGAACACCTTTGCTGAAATAATTTGGAGTTACAGCGGCGTATTGATATATAGAGAGAGATTTTCAGGTGGAAAAAGGGGAATTTGGAGATGTAAAATGGATTGTTATTTTGTAATTTCTTTGGTGGTCTTTGATAATGAATACCTTTTGTGTTGTTAGATGGATGAAGATGGAGGAAAATCTCCCAAAATTGGGATGTTTTTGGAGGCCAATCGGTTAATAATTCTAATTTAAATATCAATTTTTTCTTTACAACGCGAGAGAGGGATCGAACCTGACGTTGACGTCGAGGTT | 1330 | 37.37 | METEVREVQHHFHVLAVDDSLIDRKLLEKLLTISSCEVTCVESGDKALRYLGLLDDLDKFSSSAAANSFSSSQLSQQQEVKVNLIMTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSDVKKLEPHLQKSLTLCSADQVKEEETTLAIEIGITDDENNSKLEGSKKNENSINNSLSKRKAATPEHCEERRPKLKELQAGV | 226 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 47946795 | 47950951 | - | XM_039028412.1 | Bhi04g01903 | 33512 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi04g01903 | 226 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ORR4 | 7 | 223 | - | - | |
| Bhi04g01903 | 226 | SMART | REC_2 | 12 | 150 | IPR001789 | GO:0000160 | |
| Bhi04g01903 | 226 | Pfam | Response regulator receiver domain | 72 | 147 | IPR001789 | GO:0000160 | |
| Bhi04g01903 | 226 | Gene3D | - | 13 | 222 | - | - | |
| Bhi04g01903 | 226 | MobiDBLite | consensus disorder prediction | 183 | 226 | - | - | |
| Bhi04g01903 | 226 | ProSiteProfiles | Response regulatory domain profile. | 13 | 154 | IPR001789 | GO:0000160 | |
| Bhi04g01903 | 226 | MobiDBLite | consensus disorder prediction | 206 | 226 | - | - | |
| Bhi04g01903 | 226 | MobiDBLite | consensus disorder prediction | 190 | 205 | - | - | |
| Bhi04g01903 | 226 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 7 | 223 | IPR045279 | GO:0009736 | |
| Bhi04g01903 | 226 | SUPERFAMILY | CheY-like | 12 | 148 | IPR011006 | - | |
| Bhi04g01903 | 226 | CDD | REC_typeA_ARR | 14 | 149 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi04g01903 | Bhi-Chr4:47946795 | Bhi12g01132 | Bhi-Chr12:33965684 | 7.50E-59 | dispersed | |
| Bhi04g01902 | Bhi-Chr4:47946794 | Bhi04g01903 | Bhi-Chr4:47946795 | 6.51E-166 | tandem |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 1015 | PF00072 | Response_reg | 3.30E-15 | CL0304 | Bhi | TR |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi04g01903 | K14492 | - | csv:101216267 | 343.584 |