Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01916 TGAAGGCCCCATTCTTGAATTTCACACTTTCATATGCCCCAATCACATGCTCTCTCTCTCCCTTAGCTTTTTTTTTTTCCTTCAATATTTTGAAAGCTACCATTGTGAAAAGAAGTGGAAGAACAAATTAAAATTAAACAAGAAATAGAATAGAACCCTTCATTATCTGCTATTCCTTGTTTGTTTTTCTGCATATCTTCAGACATTCCACAGATTTTTGCAGAGCTTGGCTGTTCTGTTCGTTTAGTTTAGTTTCTTTCTTCTTCCCCAATTCTTAAAACCAAACCCCTTCTCCCTGGGATTCCATTTTTTTTTTTTACTGTTTTGCAGTGCAGATTCTTGTTCAAACTCTCGATTTTGTGTTTTTTTCTTCTGGTCAAAGATGGTGCTTTGACCAGTGGACTAATTTGGAAATAAGACGTTAGAATGGAAAGAAGAAAATGGCCATGGAAGAGAAAGTCATCTGATAAGAGTCCAGGAGAAACTGAAAGCTCTGGTTCAATGTCATCATATTCTGAGAGATTTTCCGATGAACAGGATGCAGCCAAGTCATCTCCTAATCACGAGACTCAGTCTCCAGAAGTAACGTCAAAAGCGATATGTAAAGAAGAAGACATTGATGATGATTCACCAAAACAAGAAGAGATCAATGATAGTGTGAAAAGTCTATCCGATAGGTTATCGGCTGCTCTTTTAAATGTGAAGGCCAAAGAAGATTTGGTAAAGCAGCATGCTAAAGTTGCTGAAGAAGCTATTGCAGGATGGGAAAAGGCGGAAAACGAAGTTGGACATCTAAAACAGCAGCTTGGGACTATGGTTCAGCAAAAGTCTGCATTGGAAGATCGAGTGAGCCACCTTGATGGGGCCCTCAAAGAATGTGTTAGGCAGCTTAGGCAGGCAAGGGAGGAACAGGAGCAGAAGATTCATGACGCGGTGGAGGAAAAAACCCGAGAATGGGAGTCCACCAAGGTGGATCTTGAGAGGCAGCTCCTTGCGCTCCAGAGCAAAGCAGATGCTGCTAAATGTGGATCTCCTCAAGTTGATCCAAGCCTTGGCAAGATGCTTGAGTCATTGAAAAGAGAGAATGCAGCCCTCAGGCATGAGCTTCATGCTCAATATAGGGAGTTAGAAACTAGGACTATTGAGAGGGATTTGAGTACACAAACAGCTGAAACAGCCAGTAAGCAGCATCTTGAGAGCATAAAGAAAATGGCCAAGCTCGAGGCCGAGTGTCGCAGGTTAAAGTTTATGTCATGCAAACCATCATTGCTAGATCACAAATCCATAGCTGCCTCGACAATTTCTATTGAGTCACTTACCGACACTCAATCAGATAATGGGGAGCAGCTTAATGCAGTGGATATTGAAATAAGAAGAACCGAACGAAACAAATGTGAACCTAGTTGCTCATATCCACGGGCATCAACCTTACTTGCAGAACTCAATCAGCTTGGGAATGAAAAGACTGTTAACAGTAATCTTCCATCTTCTCTTGAACTTGATCTCATGGATGATTTTCTCGAGATGGAAAGGCTTGCTTCGTTACCTGAATGTGATACAGGAAAGAGTCATCAAGAATCAGAAGCTTCCCCTCGCCTTACTGCTGAAGAAAATGCCCTAAGAACTGAGCTTGAGACCTTGCGGCATGAGAGATCACTAATGGAAGAGAAGCTAGGTGAGATGGAAGAAGCAAAGATTGAATTGGAAGAGAAGCTGAAACAAATGGAAATGGAGAAGGATGAAATGGAAGAGAGGCTAGAGATGATGGAAGTAGATAGAGTTGAAGTGAATCAAATGTTAGTGAAGATGGAGACCGAGATATCCGAATTGGGGCAAAAGTTAATGAAGATGGAAGCAGGGAAAATTGAAATGGGAGAGAAATTAAAGAAGTTGGAGACAGAGAAAGATGAACTGGAGACTGCTCTGTCCCAGAGTCAGAAATCTGTTGACATTTCACAATTTCAACTCAAGGAAACAGAAATGAAACTGGAAAAGTTACAGAATGAACTCACCATAGCAAATGAATCAAAATTAAGAATTGAGTCTCAACTTATAAGTATGGAAGCAGAATCTCTGACCATATCTGCAAAAGCTGACATGTTGGAATCTGATATTCAAAAAGAGAGGGCTTCAGCATTGGCATTGACAGTCAAGTGTCAGGTACTAGAAGAGGAGCTTTCAAGATTGAAACAGGATGAAAAACTATCACAAAGTGAAATCTCAAAAAATGAGTTGAAGATAAAGCAGGAGGATCTAGCCGTAGCTGCTGGGAAACTTGCTGAGTGTCAAAAGACAATTGCTTCTCTTGGGAATCAGCTTAAATCTCTAGCAGCACTGGAAGATTTTCTTATTGATACAACACATCTACCGGAGTTCACAGCCAGTGAATCTTACATTACTACAGATGGTGAGGAGCAATGCAAGCATTCAAACGGGACACTTTCACCCAAAAGAGATTCAGACTATACTAAAGTAGTTGATGACAATTCTGAACCATTAATGAGTAAGAATGGAGACGACTCGCCCCCATCTTCATCTTCTTCAACTTCATCGTCTCTGATTGCAAATCATATTGTCAATTCTGAAAAGAACCGAAATGGTTTTGCGAAGTTTTTCTCTCGAACCAAGAGTGGGTTAAAACTAGAAATATAGTCAGGAATGCATAGGGTGTCTAAAGATGATGGTACAGTACACAAAATTGACTGTAAAACAGCTTAGTTCTTGTGAATCTTGAATTTGCTGATTAAATGCTGTTTGTTGCAAATGAGTGTTTTCAATCTTCACATGGATGGATTTTGTAGATTTGTAACCAGCTACAAAATGGCCAGAGTAATTTTGTTTACCCTCTGGCCTGGTTATTTAATTTCCCCACATTTTTTTTCTCCCTTCCTGGGAAATA 2899 40.29 MERRKWPWKRKSSDKSPGETESSGSMSSYSERFSDEQDAAKSSPNHETQSPEVTSKAICKEEDIDDDSPKQEEINDSVKSLSDRLSAALLNVKAKEDLVKQHAKVAEEAIAGWEKAENEVGHLKQQLGTMVQQKSALEDRVSHLDGALKECVRQLRQAREEQEQKIHDAVEEKTREWESTKVDLERQLLALQSKADAAKCGSPQVDPSLGKMLESLKRENAALRHELHAQYRELETRTIERDLSTQTAETASKQHLESIKKMAKLEAECRRLKFMSCKPSLLDHKSIAASTISIESLTDTQSDNGEQLNAVDIEIRRTERNKCEPSCSYPRASTLLAELNQLGNEKTVNSNLPSSLELDLMDDFLEMERLASLPECDTGKSHQESEASPRLTAEENALRTELETLRHERSLMEEKLGEMEEAKIELEEKLKQMEMEKDEMEERLEMMEVDRVEVNQMLVKMETEISELGQKLMKMEAGKIEMGEKLKKLETEKDELETALSQSQKSVDISQFQLKETEMKLEKLQNELTIANESKLRIESQLISMEAESLTISAKADMLESDIQKERASALALTVKCQVLEEELSRLKQDEKLSQSEISKNELKIKQEDLAVAAGKLAECQKTIASLGNQLKSLAALEDFLIDTTHLPEFTASESYITTDGEEQCKHSNGTLSPKRDSDYTKVVDDNSEPLMSKNGDDSPPSSSSSTSSSLIANHIVNSEKNRNGFAKFFSRTKSGLKLEI 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 48341045 48346531 - XM_039029126.1 Bhi04g01916 33525

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01916 741 MobiDBLite consensus disorder prediction 18 33 - -
Bhi04g01916 741 Coils Coil 395 457 - -
Bhi04g01916 741 MobiDBLite consensus disorder prediction 669 684 - -
Bhi04g01916 741 Pfam Filament-like plant protein, long coiled-coil 483 636 IPR008587 -
Bhi04g01916 741 Pfam Filament-like plant protein, long coiled-coil 209 275 IPR008587 -
Bhi04g01916 741 Pfam Filament-like plant protein, long coiled-coil 325 387 IPR008587 -
Bhi04g01916 741 Pfam Filament-like plant protein, long coiled-coil 95 193 IPR008587 -
Bhi04g01916 741 Coils Coil 141 187 - -
Bhi04g01916 741 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 1 740 - -
Bhi04g01916 741 MobiDBLite consensus disorder prediction 1 78 - -
Bhi04g01916 741 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 740 - -
Bhi04g01916 741 MobiDBLite consensus disorder prediction 693 714 - -
Bhi04g01916 741 MobiDBLite consensus disorder prediction 661 714 - -
Bhi04g01916 741 MobiDBLite consensus disorder prediction 56 78 - -
Bhi04g01916 741 Coils Coil 213 233 - -
Bhi04g01916 741 MobiDBLite consensus disorder prediction 1 17 - -
Bhi04g01916 741 Coils Coil 479 541 - -
Bhi04g01916 741 Coils Coil 570 597 - -
Bhi04g01916 741 SUPERFAMILY Tropomyosin 462 640 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01916 - - - csv:101206243 1193.72
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01916 Bhi-Chr4:48341045 Bhi09g02101 Bhi-Chr9:59817375 2.65E-09 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g263 . . . . . . . . . Cmo15g00692 . . . . Sed01g3126 . . Bhi04g01916 Tan11g1279 Cmetu03g0859 . Hepe02g2273 . Lcy10g1224 . . . . . . . . . . . . . . Cme03g00560 . . . Bda01g01427 Bpe02g01641 . Bma01g00819 . . . . . . . . . . . . . . . . . . . . . . . . . . Chy03g00801 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003586 3 1 2 3 3 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 2 2 2 47