Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01921 CCACTCATTTGCAATCTTTTTCAAATAAGATCATTTCTGATGCCAATGGCAAATTTCTGCTTCTTGTTACTGCTCTTGTTGCCACTTCTCTCTTCCAAGCCAGCTTTCAGTGAAAGTTCACTAAAACCTGGATTTCATTTTGATCTTACACACGTTGATGCTACTTGGAATTTTTCCAAATTCGAAATACTACGACGAGGAATCAAGCGCGACAAGACCTGGATACAAAATTTCAATAAGATGATCATAAGTAATTTGAAAGTTCGAATGCCAGTTGTTGAACAACGAGGAAGCTATCTGATGAACTTGTCACTAGGTACGCCTCCTATTTCATTCTCTGCCATTTTCGATACTGGCAGTGACTTGGTTTGGACGCAGTGCAAGCCATGCTTGCAATGCTTTAAGCAGCCGACCCCGGTGTATGATCCTGCACAATCATCTTCATTCGCTAATGCTACTCGTTCCGCTGCATTATGCAAGGAATTGACAAATTCAAGTTCCAGCAATGGTTGTGAGTATTCGTTTAGTTATGCAGACGAGTCTTTCACTACAGGTTATTTAGCGTTCGAGACCTTGACGCTTGGGGGAGCAAACCAGAAAGTTTCTACACCAGACATAGCTTTTGGGTGTGGGATAAAGAACCATGTAAAGGGTTTGACGCAAGGTGCTGGCATAGTAGGGTTCAACCGAGGACCATTGTCGCTTCTTTCGCAGCTCCATATTAAAAAATTTTCTTACTGCTTAAGTCTAAATGGAACTGGGAGCTTGGTTTTTGGATCTTCAACAAGCATTGACAATACAACCAACCGAGCCATCAAGACCACGCCACTGATACAAAATCCATACAATCCATCTTACTACTATCTATCTCTACAAGGAATCACAGTTGGCCAAAAGTACTTGCCCGTCCCATCCTCGTCATTTAGACTAAACACCGATGGCAGTGGCGGCATGATTATAGATTCTGGCACATCAATGACGTATATAACAGAGGATGTCTTTGATGTGCTGAAGCCAGTTTTTGCTTCACAGACAAACCTCCAAGTGATTTGGTCAAGTATTGGTCTTGACCTCTGCTTTCAACTACCTTCCCACAACAATAGTAAACTTGATGTGCCTGATTTGATATTTCATTTTGAGGATCTCGACTTAAAGCTCCCAGTCGAGAATTATATGGTCGTCAATGAGGAGCTAGGGATTGTGTGCTTAGCAATGGGGGCTGCAGGAGGTTTGTCGATTTTCGGCAGTATGCAACATCAAAATATGTTGGTTCTTCATGACCTTGAAAAAAAAGTTGTATCATTCATTCCCACACAATGTTCACAGCTCGATTACTAGAAGTCAGAACTGAATGATCATGTGTATCATTTGAATAACATTGGTCCTACCAGATCTCTGCTCTTTGTTTAACTAGCATCTGAAGCAGTAAGACACTAAGATAATATTGCAAAACTTCTCT 1459 41.33 MPMANFCFLLLLLLPLLSSKPAFSESSLKPGFHFDLTHVDATWNFSKFEILRRGIKRDKTWIQNFNKMIISNLKVRMPVVEQRGSYLMNLSLGTPPISFSAIFDTGSDLVWTQCKPCLQCFKQPTPVYDPAQSSSFANATRSAALCKELTNSSSSNGCEYSFSYADESFTTGYLAFETLTLGGANQKVSTPDIAFGCGIKNHVKGLTQGAGIVGFNRGPLSLLSQLHIKKFSYCLSLNGTGSLVFGSSTSIDNTTNRAIKTTPLIQNPYNPSYYYLSLQGITVGQKYLPVPSSSFRLNTDGSGGMIIDSGTSMTYITEDVFDVLKPVFASQTNLQVIWSSIGLDLCFQLPSHNNSKLDVPDLIFHFEDLDLKLPVENYMVVNEELGIVCLAMGAAGGLSIFGSMQHQNMLVLHDLEKKVVSFIPTQCSQLDY 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 48438323 48439781 - XM_039030527.1 Bhi04g01921 33530

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01921 432 PRINTS Pepsin (A1) aspartic protease family signature 92 112 IPR001461 GO:0004190|GO:0006508
Bhi04g01921 432 PRINTS Pepsin (A1) aspartic protease family signature 305 316 IPR001461 GO:0004190|GO:0006508
Bhi04g01921 432 PANTHER OS07G0603500 PROTEIN-RELATED 16 429 - -
Bhi04g01921 432 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 305 316 IPR001969 GO:0004190|GO:0006508
Bhi04g01921 432 ProSiteProfiles Peptidase family A1 domain profile. 86 423 IPR033121 -
Bhi04g01921 432 CDD pepsin_A_like_plant 86 427 IPR034161 -
Bhi04g01921 432 Gene3D Acid Proteases 248 432 IPR021109 -
Bhi04g01921 432 Pfam Xylanase inhibitor C-terminal 274 422 IPR032799 -
Bhi04g01921 432 PANTHER OS08G0469000 PROTEIN 16 429 - -
Bhi04g01921 432 SUPERFAMILY Acid proteases 83 430 IPR021109 -
Bhi04g01921 432 Gene3D Acid Proteases 65 247 IPR021109 -
Bhi04g01921 432 Pfam Xylanase inhibitor N-terminal 86 247 IPR032861 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01921 - - - bhj:120076646 865.529
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02693 Bhi-Chr3:67314841 Bhi04g01921 Bhi-Chr4:48438323 1.61E-143 dispersed
Bhi04g01921 Bhi-Chr4:48438323 Bhi09g01442 Bhi-Chr9:36429973 4.12E-65 dispersed
Bhi04g01921 Bhi-Chr4:48438323 Bhi07g01357 Bhi-Chr7:41107108 6.45E-60 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g279 . . . . . . . . . . . . . . . . . Bhi04g01921 . . . Hepe02g2278 . Lcy10g1220 Cla08g01171 Cam08g1635 Cec08g1208 Cco08g1331 Clacu08g1331 . Cre08g1117 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi08g01032 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002918 1 2 1 2 1 2 1 2 2 2 2 2 1 1 2 2 2 2 1 2 1 2 2 2 5 2 1 1 2 1 52