Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01980 TTACTACTTGTTTCTTACCTGTGAAAGAGAAAGAAAAAGTGGTGGGGTGTTGTTTATTTCAGGTAAATATGCAGAGCTTTGAAAACCCAGAACAGTTTTATGCCCATTCTTCTTCTTCTTCTTCAATCTTTCTCCGGGGAGACGACAGTGGGCGATTTCTTACGCGTTTTCTTCCGGATATTGAGGAACTTCAACAATCCGCTGCTGCTATTGCTGCTTTTCATCAAGATGATGCTGTTGATTTAAGCCCAAGCTCTGTTTTTAGTTTAAAATCGACCCACAATACAGCTTTTCCAATTCACCTACCGTACGGGAGTACGGATGTGGGTTCAATAGGAAGAACAAGGTATTTAGACACGGGACAGGAATTAATGCGATTGAAGAGGCTGGCTCCGCCGCAGTCGGTGGCGGTGACGGTGGCAGCTTCGTCATCGTTGGGAAACGGGAGCTTTGAGAACTGGGGAGAGTCAGCCATGGCAGATAATAGCCAACAGACTGACACTTCTACAGACATCGACACCGATGAAAGAAACCAGTTTCAAGGAGCTGCACATGGAGCTCTCATGGCGGTGGACTCCATGGATCAATCTAAAGCAAAATCTGCAGATCAGAAGACTCTTCGTAGACTTGCTCAGAATCGAGAAGCAGCCAGGAAGAGTCGACTAAGGAAGAAAGCATATGTCCAGCAGCTGGAAAATAGTCGACAGAGGCTTGCGCAGCTAGAGCAGGAGCTTCATCGAGCACGCCAACAGGGCATTTTTGTGGCTTCTGGGGCAGGGGACCATTGTGCATCAATGGCGGGAAATGGTGCCTTGGCATTTGATCTCGACTATGCACGTTGGCTTGACGAGCATCAACGGCTGATCAATGATTTGAGAGCGTCTGCAAATTCTCAGTTGGGGGATGACGAATTGAGATTTCTTGTTGATGGGGTGATGGCACATTATGATGAACTCTTCAGGCTGAAAAGTGTAGGTGCTAAGGCCGATGTATTCCATATTCTTTCGGGCATGTGGAAGAGTCCTGCTGAGAGGTGTTTCATGTGGCTGGGAGGATTCCGTTCGTCCGAGCTTCTAAAGATAGTAGGGAGTCATTTGGAGCCTTTAACAGATCAGCAGTTGATGGGTATTTGCAATTTGCAACAATCTTCTCAACAAGCTGAAGATGCATTGTCACAAGGGATTGAAGCTTTGCAACAATCTCTTGTAGAAACTCTCTCCACTGCTTCTTTAGGTCCAGCCAGTTCGGGAAATGTTGCTGATTACATGGGCCAAATGGCGATTGCAATGAGCAAGCTAACTACGCTCGAGAACTTTCTACATCAGGCTGATCTTCTGAGGCAGCAAACTCTCCAACAGATGCATCGGATATTAACTACTCGTCAAGCTGCACGAGCGCTACTTGTGATCAGCGATTACATTTCACGTCTTCGAGCTCTCAGTTCTCTGTGGTTAGCACGACCGAGAGAGTGATATCTAGCTTAGCATATTGACACTCGGCTATGGGCATTGTCAGAGGGCAATCTACAGCAAGAACCTGGCTTCTTGGAATGGAACAATGGAAGTTTGAAGACTGTTTCAAGAATCCAATTTCTGTTGCTGTTATAGGAATATTAAGGGGTTATATAAGCTTGCAAGTGGAAACCTTTTTTCACCCAATTGTTTTCCACTCTGTTGTGTTGCCAAACAAGTGTCTTTTTTTTTTTCTTTTTCATTTCATATAAGTTTCTGGATGCTTAATTTGGTATGGTTTGATAGAGATTAATGTAGTCATA 1774 44.98 MQSFENPEQFYAHSSSSSSIFLRGDDSGRFLTRFLPDIEELQQSAAAIAAFHQDDAVDLSPSSVFSLKSTHNTAFPIHLPYGSTDVGSIGRTRYLDTGQELMRLKRLAPPQSVAVTVAASSSLGNGSFENWGESAMADNSQQTDTSTDIDTDERNQFQGAAHGALMAVDSMDQSKAKSADQKTLRRLAQNREAARKSRLRKKAYVQQLENSRQRLAQLEQELHRARQQGIFVASGAGDHCASMAGNGALAFDLDYARWLDEHQRLINDLRASANSQLGDDELRFLVDGVMAHYDELFRLKSVGAKADVFHILSGMWKSPAERCFMWLGGFRSSELLKIVGSHLEPLTDQQLMGICNLQQSSQQAEDALSQGIEALQQSLVETLSTASLGPASSGNVADYMGQMAIAMSKLTTLENFLHQADLLRQQTLQQMHRILTTRQAARALLVISDYISRLRALSSLWLARPRE 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 50856168 50859209 - XM_039029725.1 Bhi04g01980 33589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01980 467 Pfam Seed dormancy control 266 339 IPR025422 GO:0006351|GO:0043565
Bhi04g01980 467 Pfam bZIP transcription factor 181 221 IPR004827 GO:0003700|GO:0006355
Bhi04g01980 467 ProSiteProfiles DOG1 domain profile. 248 464 IPR025422 GO:0006351|GO:0043565
Bhi04g01980 467 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 185 200 IPR004827 GO:0003700|GO:0006355
Bhi04g01980 467 Gene3D - 181 230 - -
Bhi04g01980 467 Coils Coil 201 228 - -
Bhi04g01980 467 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 51 467 - -
Bhi04g01980 467 PANTHER TRANSCRIPTION FACTOR TGA9 51 467 - -
Bhi04g01980 467 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 224 IPR004827 GO:0003700|GO:0006355
Bhi04g01980 467 SUPERFAMILY Leucine zipper domain 182 225 IPR046347 GO:0003700|GO:0006355
Bhi04g01980 467 SMART brlzneu 178 249 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01980 Bhi-Chr4:50856168 Bhi11g02795 Bhi-Chr11:74922991 2.56E-167 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1025 PF14144 DOG1 1.10E-29 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01980 K14431 - csv:101210308 831.247