Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01984 ATGGTTTTCTCCGACAAAATGCAAGAAATTGCAGCTAAAATGGGTTTCACACTCTCCGATTTCGCCGAAACTTTGGAACAAGAACGCCGTAAAGTCATCATGTTTCAGCGCGAGCTCCCTCTCTGTTTGCAGCTCGTTTCCCATGCCATTGATTGTTGCAGGCAGCAGTTATCGGGGACGACGACGGAGAATCGTCAATCGGAATGCTCTGAACAGACTTCCAGTGACATGGGTCCGATTCTTGAGGAGTTTATTCCGATTAACAGAAATGGGGTTTCTGATTTTGAACAAACGGAGAAGAACAAGAATGACGATGACTCTGATTTAAACAATTTGAATTTGGCTCCGTCTGATTGGCTCAGATCTGCTCAGCTTTGGAATCAGACTTCAGATCCTCCTCCCCTGAATCAGGATCCGCCGGAGAACACGGCTGTTGTTGAGGTCAATAGAAATGGCGGCGCTTTCCGGCCGTTCCAGAAGGAGAAAACCGGTGGAGGAGGGACATCGTCATCTTCAGCCCCGGCTCCTGCTGCGGAAACGAGCTCGACGACGGAGACGGGGTCAGGGGGAAGCAGCCGACGGGAAGAGAAGGAAGCGCAGAATCAGAGGAAACAGAGACGTTGCTGGTCGCCGGAGCTGCACCGGCGGTTCCTTCATGCGCTACAGCAGCTCGGAGGCTCCCATGTGGCGACGCCGAAGCAAATAAGGGAATTGATGAAGGTGGATGGTCTTACCAACGACGAAGTGAAAAGTCATCTACAGAAGTATCGTTTGCACACGAGACGGCCATCTCCGACGATCCATAACAACGAGAGCGGCCACGCGCCTCAGTTCCTGGTGGTCGGCGGCATATGGGTACCGGCGGCAGAATACGCCGCCGCGTCCGCCACCACTTCCTCGGGAGAAGCAGTCAGCGCCGCTGCCACAAACGGAATTTATGCACCGGTGGTAGCAGCGGCAGCGCCGCAGCCATTACCCAGTATAGTCCAAAAGCCTAAGCCCAAGATTCCTTCCTCAGCCACCGCCGCCGTCGCCGCCGAATGTAATTCTCCGACTACATCTTCCTCTACTCATACGTCTTCAGTTTCACCAGCCTCTTCTTGAGTTGGAATTTTGTTTTTATTTTTGTTTTTTTGTACACTTTTGATGTGTGAATTTTTATAAAAGTTTTGTTACAAAAACGTGCATAGAAATAAGAACAAGTTGAGATTAAATTCGTTTA 1222 50.65 MVFSDKMQEIAAKMGFTLSDFAETLEQERRKVIMFQRELPLCLQLVSHAIDCCRQQLSGTTTENRQSECSEQTSSDMGPILEEFIPINRNGVSDFEQTEKNKNDDDSDLNNLNLAPSDWLRSAQLWNQTSDPPPLNQDPPENTAVVEVNRNGGAFRPFQKEKTGGGGTSSSSAPAPAAETSSTTETGSGGSSRREEKEAQNQRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPTIHNNESGHAPQFLVVGGIWVPAAEYAAASATTSSGEAVSAAATNGIYAPVVAAAAPQPLPSIVQKPKPKIPSSATAAVAAECNSPTTSSSTHTSSVSPASS 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 51039514 51043040 - XM_039029769.1 Bhi04g01984 33593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01984 367 Gene3D - 203 261 - -
Bhi04g01984 367 SUPERFAMILY Homeodomain-like 202 262 IPR009057 -
Bhi04g01984 367 Pfam Myb-like DNA-binding domain 206 257 IPR001005 -
Bhi04g01984 367 MobiDBLite consensus disorder prediction 155 208 - -
Bhi04g01984 367 MobiDBLite consensus disorder prediction 60 79 - -
Bhi04g01984 367 MobiDBLite consensus disorder prediction 163 189 - -
Bhi04g01984 367 MobiDBLite consensus disorder prediction 190 208 - -
Bhi04g01984 367 MobiDBLite consensus disorder prediction 60 77 - -
Bhi04g01984 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 261 IPR017930 -
Bhi04g01984 367 PANTHER TRANSCRIPTION FACTOR HHO2 18 361 - -
Bhi04g01984 367 MobiDBLite consensus disorder prediction 347 367 - -
Bhi04g01984 367 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 204 259 IPR006447 GO:0003677
Bhi04g01984 367 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 18 361 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01984 Bhi-Chr4:51039514 Bhi07g01367 Bhi-Chr7:41194092 5.71E-112 dispersed
Bhi04g01984 Bhi-Chr4:51039514 Bhi10g02074 Bhi-Chr10:52035161 2.53E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1026 PF00249 Myb_DNA-binding 1.60E-06 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01984 - - csv:101210056 545.043