Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi04g01989 | TCTATAAATCAAACAAAAAAACTATCCATATATATACATTTCCATAAAAAATAGCTTTGGTTTTGGGTTCTATGAAAGTCTCCAAAAACTGCTTCTTGCAATACTTAAATTAATTTATTAAAAAAAAACTTTAAAAGCTTCTTTTGGTGGAGAGATGAGCTCCAATCATTTAGAGATGATGAGCAACCATTTTACAGTGGAGAGCTCCAATCAAAATGATCAGCAAGGACCAATCAATCCTTTTTTCACTGAGAGCTTTTGTTTTGAAAAGTTTGCTCATTTTAATGAAATCCCTAGCTGTGTTTCACCTCCTCTTTACTCTTCATTTCCTACCTTTAACAGAGGAGATCCCAAGAGCTTGGGAGGAAGAAAGAGGAAAAGAGAAAATGAAAGGGATGAGGAGAAGCCAAAAGAAGTGATTCATGTGAGGGCAAAAAGAGGCCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTAAGAAGAGAAAAGATAAACCAGAGGCTGAGATTCTTACAGGACTTGGTTCCAGGATGCTACAAGACAATGGGAATGGCAGTTATGTTCGATGTGATCATAAATTACATCCAATCTCTGCAGAATCAGATTGAGTTCCTGTCCATGAAGCTTTCAGTTGCTAGTCGCTATTATGACTTCAACAACAGCCCCGAGACTGATGGCATTGAGATATTGCAGGCCACAAAGGGGTGTGATCATATGCAACATGTGGAGAGGATTGTACTTAAAGAAGGGTATGGAGGGCCCTTTAACCACCACTCTACTTTGCCACCTCTCTAACTTCAATACAAAATAATCTCAACACACTTCCTTTCCTTCTTTTCAAGCTATAATGCTTTAAATTGTTTCCATGAAAACACATTACTATATATATATGATTAAAGATAAACAAAATATATGATTTCAATTAGTTAATTGAGGTTATTGTGAGTTTTAATTTTACCCTTTTAAAGTTGAATGTAATAAATCTCTAAAAGTATAGACGAGATAAATTTTTTATTGGTCAA | 1023 | 35.29 | MSSNHLEMMSNHFTVESSNQNDQQGPINPFFTESFCFEKFAHFNEIPSCVSPPLYSSFPTFNRGDPKSLGGRKRKRENERDEEKPKEVIHVRAKRGQATDSHSLAERVRREKINQRLRFLQDLVPGCYKTMGMAVMFDVIINYIQSLQNQIEFLSMKLSVASRYYDFNNSPETDGIEILQATKGCDHMQHVERIVLKEGYGGPFNHHSTLPPL | 213 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 51525676 | 51547961 | - | XM_039030446.1 | Bhi04g01989 | 33598 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi04g01989 | 213 | CDD | bHLH_AtBPE_like | 87 | 170 | - | - | |
| Bhi04g01989 | 213 | MobiDBLite | consensus disorder prediction | 67 | 87 | - | - | |
| Bhi04g01989 | 213 | Pfam | Helix-loop-helix DNA-binding domain | 101 | 126 | IPR011598 | GO:0046983 | |
| Bhi04g01989 | 213 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 95 | 166 | IPR036638 | GO:0046983 | |
| Bhi04g01989 | 213 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 97 | 147 | IPR011598 | GO:0046983 | |
| Bhi04g01989 | 213 | MobiDBLite | consensus disorder prediction | 61 | 87 | - | - | |
| Bhi04g01989 | 213 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 62 | 197 | IPR024097 | GO:0006355 | |
| Bhi04g01989 | 213 | PANTHER | TRANSCRIPTION FACTOR BHLH75 | 62 | 197 | - | - | |
| Bhi04g01989 | 213 | Gene3D | - | 93 | 165 | IPR036638 | GO:0046983 | |
| Bhi04g01989 | 213 | SMART | finulus | 103 | 153 | IPR011598 | GO:0046983 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi01g03473 | Bhi-Chr1:87815370 | Bhi04g01989 | Bhi-Chr4:51525676 | 3.34E-56 | dispersed | |
| Bhi04g01989 | Bhi-Chr4:51525676 | Bhi08g01233 | Bhi-Chr8:38241415 | 2.16E-50 | dispersed | |
| Bhi04g01989 | Bhi-Chr4:51525676 | Bhi04g01990 | Bhi-Chr4:51525876 | 1.39E-134 | tandem |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 1027 | PF00010 | HLH | 5.30E-05 | No_clan | Bhi | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi04g01989 | - | - | cpep:111809259 | 300.441 |