Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02002 AATAACTAACCTAATAAAAGCTTGGAGAGCAAAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAAATCCTTTTGTTTTCTTTTTTGATCTTCACCCCTTTTGTGGCTTTTGTGTGCTTGTTCTACTTTTCTTCTCTTGTGTGAATTGTAATAATTGCTCTAGAGGCTCCCATGGATGTCGACTCCGGCAAGGCAGCGGTGACAACGGAGATGGTGGAGACACATGAAGTTGGCAACGGCGACGGTGGCGGCAGGAATGGATCGAATTCCGGTGAAGAAGAAAAGGGGTCGTCTTTGTTGTTGTTTGAAGATGGTGAGAAGAATTTTGGTGGGAACCGTTGGCCAAGACAAGAGACTTTGGCTTTGTTGAAGATAAGATCTGATATGGATGCAATTTTTAGAGATGCAACTCACAAAGCTCCATTGTGGGATGAAGTTTCAAGGAAGTTGGGAGAGCTTGGATTCCATAGAACTCCAAAGAAATGCAAGGAGAAATTTGAGAATGTTTATAAGTATCACAAGAGAACCAAAGATGTTCGAAGTGGGAAATCCGATAATAGCAAAAAAGTTTATAGATTTTCAGATGAATTGGAGGCTTTTGATCATCATAATAGCTTATTTCAATCTCACCACCACCCGCCACCACCAACGCAGCCGCCAGTTCCCCGGACGACAGCGGTGACTACACCGCTGCCATCTTACAACCCTCCGGCGACGAAAACAATCAACTCTACTGTTCCATCCACCATGAACACTACAACAAACAACAATTCTTTGCCACCAAAGTCCTCTAATAACAACCCTCCTTCCAATTTGCCAAACATGGTTGGCAATGTGATGTTCTCGAGCTCCACGTCGTCGTCGACGGCATCGGAGGAAGATCCGTTTCAGAGTAGCAGGAGGAGGAGGAGGAAGAGGAAGTGGAGTGATTTCTTCTTGAGGTTGACAAAGGAGGTAATAGAGAAGCAAGAAGGGCTTCAACTAAAGTTCTTAGAAGCCTTGGAGAGAATAGAGAATCAAAGGAAATTAAGAGATGAAGCATGGAGAATGAAAGAGATGACAAGGGTTAATCAAGAACATGAAGTTTTAGTTCAAGAAATGTCCATGGCCGTCGCAAAAGATGCAGCCGTCGTCGCATTTTTGCAAAAGATAGCTCCATCTTCATTATCTCCTTCTCCTTCTCCAGTACCACCACCACAGCCGCCACCACCACCAACTCAGACGCAAAACGACGAGAATAATGGAAAGATGACGGTGGCAATCTCGACAACGACGACAAATGGAAAGATGAGTAGCATGATAGGAAGCCCTTCAAGATGGCCAAAAGGTGAAGTTGAAGCATTGATAAGGCTAAGGACAGAAATGGAAATGAAGTATCAAGAGAATGGGCCAAAAGGGTTATTATGGGAAGAGATTTCAGCAGCAATGAGAGGGCTTGGATACAATAGAAGCTCAAAGAGATGCAAAGAGAAATGGGAAAACATAAACAAATACTTCAAAAAGGTGAAAGATAGCAACAAGAAGAGGCCAGAAGACTCCAAGACATGCCCTTATTTTCATCAGTTAGATGCACTATATAGAGAGAAAGAAAAAAATATGAATTTTGATATCAATAGCCAAATGGAGCCATTGATGGTAGAACCAGAACAACAATGGCCACCTCCATTTCAACCCAATAATCAAATCATGGGAAATTTACAAAGAATAAATGGTGAAGGAAATCAAGAAGAAGAAGAAGAAGAAGAAGATGATGAAGAAGAAGATGGAGGAAGTAGTAGCACAGATGTGGAAGATTGAAGAAAAAAATAATAAAAAATAAAAAATGGGTTGTATTCTTCAATAAGAATATAATCCAATACAGTACAATTCAAAAGGGAAAACAAAGGTTTGGCACAAAAAGCAAGCAACTTTGACACTGATGGAAGTCAGATTTGGTATTACATGTGCTAAAGAGCGAATTGGGAAAATTGGGTAATGGGAAATTTCAAATTTGTATAATAATTAATTATTGTGTTGTCTATAATGGGATTAATTTATTTTTCTTTCCTTTTTCCTCTTCTTATTATTATAATAACGAAGATCTAAAACTATTCCCGAAA 2097 39.63 MDVDSGKAAVTTEMVETHEVGNGDGGGRNGSNSGEEEKGSSLLLFEDGEKNFGGNRWPRQETLALLKIRSDMDAIFRDATHKAPLWDEVSRKLGELGFHRTPKKCKEKFENVYKYHKRTKDVRSGKSDNSKKVYRFSDELEAFDHHNSLFQSHHHPPPPTQPPVPRTTAVTTPLPSYNPPATKTINSTVPSTMNTTTNNNSLPPKSSNNNPPSNLPNMVGNVMFSSSTSSSTASEEDPFQSSRRRRRKRKWSDFFLRLTKEVIEKQEGLQLKFLEALERIENQRKLRDEAWRMKEMTRVNQEHEVLVQEMSMAVAKDAAVVAFLQKIAPSSLSPSPSPVPPPQPPPPPTQTQNDENNGKMTVAISTTTTNGKMSSMIGSPSRWPKGEVEALIRLRTEMEMKYQENGPKGLLWEEISAAMRGLGYNRSSKRCKEKWENINKYFKKVKDSNKKRPEDSKTCPYFHQLDALYREKEKNMNFDINSQMEPLMVEPEQQWPPPFQPNNQIMGNLQRINGEGNQEEEEEEEDDEEEDGGSSSTDVED 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 53137553 53140355 - XM_039030587.1 Bhi04g02002 33611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02002 541 CDD GT1 381 446 - -
Bhi04g02002 541 SMART sant 53 115 IPR001005 -
Bhi04g02002 541 SMART sant 379 441 IPR001005 -
Bhi04g02002 541 ProSiteProfiles Myb-like domain profile. 381 439 IPR001005 -
Bhi04g02002 541 ProSiteProfiles Myb-like domain profile. 49 113 IPR001005 -
Bhi04g02002 541 MobiDBLite consensus disorder prediction 170 237 - -
Bhi04g02002 541 MobiDBLite consensus disorder prediction 499 514 - -
Bhi04g02002 541 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 5 540 - -
Bhi04g02002 541 MobiDBLite consensus disorder prediction 333 351 - -
Bhi04g02002 541 Pfam Myb/SANT-like DNA-binding domain 55 136 IPR044822 -
Bhi04g02002 541 Pfam Myb/SANT-like DNA-binding domain 381 468 IPR044822 -
Bhi04g02002 541 MobiDBLite consensus disorder prediction 149 248 - -
Bhi04g02002 541 MobiDBLite consensus disorder prediction 1 41 - -
Bhi04g02002 541 MobiDBLite consensus disorder prediction 155 169 - -
Bhi04g02002 541 MobiDBLite consensus disorder prediction 491 541 - -
Bhi04g02002 541 MobiDBLite consensus disorder prediction 517 541 - -
Bhi04g02002 541 MobiDBLite consensus disorder prediction 330 357 - -
Bhi04g02002 541 CDD GT1 55 120 - -
Bhi04g02002 541 PANTHER - 5 540 - -
Bhi04g02002 541 Gene3D - 57 118 - -
Bhi04g02002 541 Gene3D - 383 444 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02002 Bhi-Chr4:53137553 Bhi10g02341 Bhi-Chr10:61055848 2.14E-126 dispersed
Bhi04g02002 Bhi-Chr4:53137553 Bhi04g02003 Bhi-Chr4:53137553 1.46E-13 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1031 PF13837 Myb_DNA-bind_4 1.00E-22 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02002 - - csv:101207491 734.561