Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02003 AGATGGTGAGAAGAATTTTGGTGGGAACCGTTGGCCAAGACAAGAGACTTTGGCTTTGTTGAAGATAAGATCTGATATGGATGCAATTTTTAGAGATGCAACTCACAAAGCTCCATTGTGGGATGAAGTTTCAAGATTTCAGGAAGTTGGGAGAGCTTGGATTCCATAGAACTCCAAAGAAATGCAAGGAGAAATTTGAGAATGTTTATAAGTATCACAAGAGAACCAAAGATGTTCGAAGTGGGAAATCCGATAATAGCAAAAAAGTTTATAGATTTTCAGATGAATTGGAGGCTTTTGATCATCATAATAGCTTATTTCAATCTCACCACCACCCGCCACCACCAACGCAGCCGCCAGTTCCCCGGACGACAGCGGTGACTACACCGCTGCCATCTTACAACCCTCCGGCGACGAAAACAATCAACTCTACTGTTCCATCCACCATGAACACTACAACAAACAACAATTCTTTGCCACCAAAGTCCTCTAATAACAACCCTCCTTCCAATTTGCCAAACATGGTTGGCAATGTGATGTTCTCGAGCTCCACGTCGTCGTCGACGGCATCGGAGGAAGATCCGTTTCAGAGTAGCAGGAGGAGGAGGAGGAAGAGGAAGTGGAGTGATTTCTTCTTGAGGTTGACAAAGGAGGTAATAGAGAAGCAAGAAGGGCTTCAACTAAAGTTCTTAGAAGCCTTGGAGAGAATAGAGAATCAAAGGAAATTAAGAGATGAAGCATGGAGAATGAAAGAGATGACAAGGGTTAATCAAGAACATGAAGTTTTAGTTCAAGAAATGTCCATGGCCGTCGCAAAAGATGCAGCCGTCGTCGCATTTTTGCAAAAGATAGCTCCATCTTCATTATCTCCTTCTCCTTCTCCAGTACCACCACCACAGCCGCCACCACCACCAACTCAGACGCAAAACGACGAGAATAATGGAAAGATGACGGTGGCAATCTCGACAACGACGACAAATGGAAAGATGAGTAGCATGATAGGAAGCCCTTCAAGATGGCCAAAAGGTGAAGTTGAAGCATTGATAAGGCTAAGGACAGAAATGGAAATGAAGTATCAAGAGAATGGGCCAAAAGGGTTATTATGGGAAGAGATTTCAGCAGCAATGAGAGGGCTTGGATACAATAGAAGCTCAAAGAGATGCAAAGAGAAATGGGAAAACATAAACAAATACTTCAAAAAGGTGAAAGATAGCAACAAGAAGAGGCCAGAAGACTCCAAGACATGCCCTTATTTTCATCAGTTAGATGCACTATATAGAGAGAAAGAAAAAAATATGAATTTTGATATCAATAGCCAAATGGAGCCATTGATGGTAGAACCAGAACAACAATGGCCACCTCCATTTCAACCCAATAATCAAATCATGGGAAATTTACAAAGAATAAATGGTGAAGGAAATCAAGAAGAAGAAGAAGAAGAAGAAGATGATGAAGAAGAAGATGGAGGAAGTAGTAGCACAGATGTGGAAGATTGAAGAAAAAAATAATAAAAAATAAAAAATGGGTTGTATTCTTCAATAAGAATATAATCCAATACAGTACAATTCAAAAGGGAAAACAAAGGTTTGGCACAAAAAGCAAGCAACTTTGACACTGATGGAAGTCAGATTTGGTATTACATGTGCTAAAGAGCGAATTGGGAAAATTGGGTAATGGGAAATTTCAAATTTGTATAATAATTAATTATTGTGTTGTCTATAATGGGATTAATTTATTTTTCTTTCCTTTTTCCTCTTCTTATTATTATAATAACGAAGATCTAAAACTATTCCCGAAA 1798 39.38 MQFLEMQLTKLHCGMKFQDFRKLGELGFHRTPKKCKEKFENVYKYHKRTKDVRSGKSDNSKKVYRFSDELEAFDHHNSLFQSHHHPPPPTQPPVPRTTAVTTPLPSYNPPATKTINSTVPSTMNTTTNNNSLPPKSSNNNPPSNLPNMVGNVMFSSSTSSSTASEEDPFQSSRRRRRKRKWSDFFLRLTKEVIEKQEGLQLKFLEALERIENQRKLRDEAWRMKEMTRVNQEHEVLVQEMSMAVAKDAAVVAFLQKIAPSSLSPSPSPVPPPQPPPPPTQTQNDENNGKMTVAISTTTTNGKMSSMIGSPSRWPKGEVEALIRLRTEMEMKYQENGPKGLLWEEISAAMRGLGYNRSSKRCKEKWENINKYFKKVKDSNKKRPEDSKTCPYFHQLDALYREKEKNMNFDINSQMEPLMVEPEQQWPPPFQPNNQIMGNLQRINGEGNQEEEEEEEDDEEEDGGSSSTDVED 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 53137553 53140049 - XM_039030588.1 Bhi04g02003 33612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02003 471 MobiDBLite consensus disorder prediction 447 471 - -
Bhi04g02003 471 MobiDBLite consensus disorder prediction 421 471 - -
Bhi04g02003 471 PANTHER - 21 470 - -
Bhi04g02003 471 MobiDBLite consensus disorder prediction 85 99 - -
Bhi04g02003 471 MobiDBLite consensus disorder prediction 79 178 - -
Bhi04g02003 471 Pfam Myb/SANT-like DNA-binding domain 311 398 IPR044822 -
Bhi04g02003 471 ProSiteProfiles Myb-like domain profile. 311 369 IPR001005 -
Bhi04g02003 471 MobiDBLite consensus disorder prediction 260 287 - -
Bhi04g02003 471 Gene3D - 12 48 - -
Bhi04g02003 471 Gene3D - 313 374 - -
Bhi04g02003 471 CDD GT1 311 376 - -
Bhi04g02003 471 MobiDBLite consensus disorder prediction 100 167 - -
Bhi04g02003 471 MobiDBLite consensus disorder prediction 263 281 - -
Bhi04g02003 471 MobiDBLite consensus disorder prediction 429 444 - -
Bhi04g02003 471 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 21 470 - -
Bhi04g02003 471 SMART sant 309 371 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02003 Bhi-Chr4:53137553 Bhi10g02341 Bhi-Chr10:61055848 1.56E-16 dispersed
Bhi04g02002 Bhi-Chr4:53137553 Bhi04g02003 Bhi-Chr4:53137553 1.46E-13 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1032 PF13837 Myb_DNA-bind_4 8.10E-23 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02003 - - csv:101207491 610.527