Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02053 ATGGATTCTGAGGACGATCTTCATTACTCCACCGACGTTGAATCCGTCGACGATGATTGCGATTTCTACAGCGGTGAAATGGACATGGGTATGGGTTATTACACCGATGATGATGACCCTGATGCTGAGGATTTCGTCGACGACGATACCGATGATTACTTCGAGTCCCGCCGCCGCGAGCAAAATTATACAATACTAAATGAGTCAGATATAAGACAACGCCAAGAGGATGACATTACAAGAATTTCTTCTGTACTTTCTATATCACGCGTAGCTGCCATTGTCTTACTCCGCCACTTCAATTGGAGTGTTACTAAAGTCCACGATGAATGGTTTGCCGATGAAACTCGAGTAAGGAAGCAAGTTGGCTTGTTGGAAGCACCTGTTGTACATGTCCTAAATGCTAGAGATCGAACCTGTGGAATCTGTTTTGAGTCGTATCCAAATAGTAGGATCAAGTCAGCTGCCTGTGGTCATCCTTTCTGTGCCTTCTGCTGGGAAGGCTACATTAGCACATCAATTAATGACGGTCCTGGATGTCTGTCGTTGAGATGTCCTGATCCTTCTTGTGGTGCTGTGGTTGATCAAGACATGATTAATTCATTGGCCTCCAGTGAAGACAGGAAGAAATATGCTCGTTATCTTCTTAGGTCTTATGTTGAAGACAACAAAAAGACTAAATGGTGCCCAGCGCCTGGTTGTGAGTATGCTGTTCTCTTTGATGCTGGCAATGGAAATTATGATGTTTCTTGCTTCTGCACATATGGCTTCTGCTGGAAATGCACGGAAGAAGCTCACCGTCCTGTAGATTGTGCTACTGTGGAAAAATGGATTTTAAAGAACAGTGCCGAGTCTGAAAATATGAACTGGATATTGGCTAATTCCAAGCCTTGTCCAAAGTGCAAGCGGCCAATTGAGAAAAATCAAGGGTGCATGCACATGACTTGCACACCTCCGTGTAAATTTGAATTTTGCTGGCTATGTCTTGGTGCATGGTCTGATCATGGTGAAAGAACTGGTGGTTTCTATGCTTGCAACCGATATGAGGTAGCTAAGCAAGATGGTGTGTATGATGAGGCTGAGAAAAGAAGAGAAATGGCAAAGAATTCTTTGGAGAGATACACTCACTATTATGAACGTTGGGCAAGCAATCAAACATCTAGGCAAAAAGCAATAGCAGATTTGCATCAAATGCAGAATGTGCATATTGAGAAGCTCAGTGATATACACTGCACTCCTGAATCTCAGCTAAAGTTCATAACAGAGGCTTGGTTACAGATAATTGAATGCAGACGAGTTTTGAAATGGACTTATGCATATGGTTATTACCTGCCGGAACAGGAGCATGCCAAGAGACAGTTTTTTGAATATTTGCAAGGTGAGGCCGAGTCTGGATTAGAAAGGCTTCATCAATGCGCCGAAAAGGAACTACTCCAGTTCCTTAATGCAGAAGGTCCATCAAAAGAATTTAATGACTTCCGCACAAAGCTTGCTGGTCTGACCAGTGTTACTCGAAATTACTTTGAGAACCTGGTTAGAGCATTAGAGAATGGGCTTTCAGATGTAAACTCTCACGGAGCAAGCAGCGGCACAACGAGCTCAAAAAACACAGCAGGAAGTAGTAAAGGAGGGAGAAGCGGACGAGGTAAGGGAGTGAATCGAACTGCTAGTTCGACCAGAAGTGGCGACAATGGCACTCATTGGTCATGTGAACACTGTACCTTTGTGAACACTAGATCTGCTACCACGTGCGAGATGTGCCATCAACGCCATTGAAAACCTCTGGTTTCAATCAAAGTAGAGTAAGAGAGTAATCAACAACGACGAGAAACAGAATGATTTGGTGGGTTTGCGAACCCTTTTTTTTATGTGTTGATTATTTGAAAAAGGAGAAAAAAAGGAAGATAAAAAAGGACTGCTGTGATGATGATTGGAAAACAGCAGGGGATGGATGGTGTGTGTTGAGAGAGGGAAATGTCAAATATGATCTCAATGTAAATAGTTGGCAGTATAAATTAACAAATTTGTGTTGTCCAAAAATGTGGCTTTCACTTGCTGGTTTATAAATGTCTCGTACAAATACAGGTGGGAGATTATAACTACTAGTGTTGAAATAATGCATTAAAGTTTCTATCATGCCCAA 2143 42.37 MDSEDDLHYSTDVESVDDDCDFYSGEMDMGMGYYTDDDDPDAEDFVDDDTDDYFESRRREQNYTILNESDIRQRQEDDITRISSVLSISRVAAIVLLRHFNWSVTKVHDEWFADETRVRKQVGLLEAPVVHVLNARDRTCGICFESYPNSRIKSAACGHPFCAFCWEGYISTSINDGPGCLSLRCPDPSCGAVVDQDMINSLASSEDRKKYARYLLRSYVEDNKKTKWCPAPGCEYAVLFDAGNGNYDVSCFCTYGFCWKCTEEAHRPVDCATVEKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEVAKQDGVYDEAEKRREMAKNSLERYTHYYERWASNQTSRQKAIADLHQMQNVHIEKLSDIHCTPESQLKFITEAWLQIIECRRVLKWTYAYGYYLPEQEHAKRQFFEYLQGEAESGLERLHQCAEKELLQFLNAEGPSKEFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVNSHGASSGTTSSKNTAGSSKGGRSGRGKGVNRTASSTRSGDNGTHWSCEHCTFVNTRSATTCEMCHQRH 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 54773226 54780060 - XM_039029108.1 Bhi04g02053 33662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02053 591 ProSiteProfiles Zinc finger RanBP2 type profile. 560 591 IPR001876 -
Bhi04g02053 591 SMART ibrneu5 275 345 IPR002867 -
Bhi04g02053 591 SMART ibrneu5 209 271 IPR002867 -
Bhi04g02053 591 ProSiteProfiles Zinc finger RING-type profile. 140 186 IPR001841 -
Bhi04g02053 591 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 26 539 IPR031127 GO:0004842|GO:0016567
Bhi04g02053 591 SUPERFAMILY RING/U-box 138 218 - -
Bhi04g02053 591 ProSiteProfiles TRIAD supradomain profile. 136 349 IPR044066 -
Bhi04g02053 591 SUPERFAMILY Ran binding protein zinc finger-like 563 589 IPR036443 -
Bhi04g02053 591 Gene3D - 562 591 - -
Bhi04g02053 591 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 26 539 - -
Bhi04g02053 591 Pfam Ariadne domain 358 519 IPR045840 -
Bhi04g02053 591 SMART zf_4 566 590 IPR001876 -
Bhi04g02053 591 MobiDBLite consensus disorder prediction 523 565 - -
Bhi04g02053 591 SUPERFAMILY RING/U-box 290 338 - -
Bhi04g02053 591 MobiDBLite consensus disorder prediction 523 543 - -
Bhi04g02053 591 Gene3D - 267 522 - -
Bhi04g02053 591 Coils Coil 357 377 - -
Bhi04g02053 591 Pfam IBR domain, a half RING-finger domain 209 271 IPR002867 -
Bhi04g02053 591 Pfam IBR domain, a half RING-finger domain 288 336 IPR002867 -
Bhi04g02053 591 CDD RING-HC_RBR_TRIAD1_like 140 190 - -
Bhi04g02053 591 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 220 IPR013083 -
Bhi04g02053 591 ProSitePatterns Zinc finger RanBP2-type signature. 568 587 IPR001876 -
Bhi04g02053 591 MobiDBLite consensus disorder prediction 551 565 - -
Bhi04g02053 591 SUPERFAMILY RING/U-box 210 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02053 Bhi-Chr4:54773226 Bhi06g00947 Bhi-Chr6:26084715 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02053 K11968 - csv:101223037 1164.06