Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02131 AAAAAGTTTTTCTTTGTATTATTATAATTAATTTTCAGTTCAAGAAAAAGGTAGTTTGTTGTGAGAAATTGGTTCACGCGTTGGATTTAATATAAGCCTGCAAAACTTGGGTTCTGTATCAGCCACATAGAGAGAGGAAGAGAGTTCTTATTCTTTAAGAAGCTACAAAGAAGAAGACCCTGAGCTATTTCTTCTTCTTTTTTTCCTTTTTTGTAGTCCCGTTGTTCTTCAATCTAATCTTCTACCGTGGGTTTTTAGTTTTGGATTGTTGGGTTTTCATCCCCATCTACAGATTCTTCTAATATCTTCATTTTCAGGCTTGTATTTTGCTCATCTTCAATCGTTGATGGTGTATGTTGTGGTTTCGGTTATATTTTAAGGGGCATCTAGTGTGTGACGCAACATTGAATATACGATAATCAGGGCTTTGTGACACATCCAGTGATGTCGTTTCGTAGTATAGTTCGTGACGTTAGGGAGGGGTTTGGAAGTTTATCCAGGCGTAGTTTTGAGGTGAGACTGCCTGGTCACCAGCGGGGTAAATCTCATGGATCAGTCCATGATTTGCATGACCAACCTCTGGTAATTCAAAACAGTCGTTGGGCTAGCCTCCCACCTGAGCTATTGCGGGATGTAGTCATGAGATTGGAGGAGAGTGAGAGTGTGTGGCCTGCTCGCAAACATGTTGTTGCTTGTGCTGCTGTTTGTAGGTCGTGGAGGGAAATGTGCAAAGAGATAGTAAAAAGTCCCGAGTTCTCTGGAAAAATCACCTTCCCTGTCTCCTTAAAACAGCCAGGGGCTCGTGATGGAACCATTCAGTGCTTCATTAAGAGGGACAAATCTAATTTGACTTATCATCTTTACCTTTGCCTTAGTCCTGCTTTACTTGTTGATAATGGGAAGTTTCTTCTTTCTGCCAAAAGAACAAGGAGAACAACGTGCACTGAATACGTGATCTCCATGGATGCAGATAATATATCAAGATCAAGCAACACCTACATTGGAAAACTAAGGTCAAATTTTCTTGGGACCAAGTTCATTATCTATGATACACAGCCTCCATACAACAACGCCCAGATTTCCCCACCTGGCCGTAGTCGTAGATTCTACTCGAAAAAAGTTTCTCCAAAAGTCCCAACTGGTAGCTATGACATTGCTCAAGTCACTTATGAACTGAACGTTCTTGGCACAAGAGGCCCCCGAAAGATGCACTGCACGATGCACTCCATCCCTGCCTCATCTCTTGAGGCTGGTGGTACTGTTCCAGGCCAGCCAGAGGTTGTCCCTCGACTCCTTGGGGATTCATTTCGAAGTATATCATTCTCCAAGTCTGTCTTCAATTCTACAGAGTTCAGTAGTTCCCGTTTCTCTGACATTGTTGGCCCTCGAGACGAAGATGAAACGGGGAAGGAGAGACCATTGATTCTTAGGAACAAGCCGCCACGGTGGCATGAGCAGTTGCAGTGTTGGTGCCTTAATTTTCGGGGGAGAGTAACCGTTGCCTCTGTCAAAAACTTTCAACTGATAGCTGCTACAGAGCCTTCTTCCACAGCTACAAACCAATCACAGCCAAACCAACATGCCCAATCTTCCCAATCCGACCATGACAAGATCATTCTTCAATTTGGGAAGGTTGGGAAGGACATGTTTACGATGGATTACCGATATCCATTGTCAGCATTTCAAGCTTTTGCAATCTGTTTGAGCAGCTTTGACACCAAATTGGCTTGTGAATAAATGAAACTAGAAGTCCCATTGTGAAATCGAGGGGTCTTATGATGGTTTCTTTCTTCTTTCAGATAGAATGTGTTTGGTTGTATGCAGTGACTGTAAAAAATCATCATCCTGAAAAATTTGTATAAAAGTGTGTGCACCCTAAAGAGATTTCTTTCTCCCCTGCCCTCCCGCCCGACCTCGCTTTAATACCTTTTGCTTGGTTTTCTGTTTGCTAATCAACAAATGTTCATTGAATGTTAGGAATGTAAGCATGGTTCCATATCGACCTGCATCAAAGAAGACAGTAAAACCTGTGCAGAGGTCCCTTCAAAA 2049 42.56 MSFRSIVRDVREGFGSLSRRSFEVRLPGHQRGKSHGSVHDLHDQPLVIQNSRWASLPPELLRDVVMRLEESESVWPARKHVVACAAVCRSWREMCKEIVKSPEFSGKITFPVSLKQPGARDGTIQCFIKRDKSNLTYHLYLCLSPALLVDNGKFLLSAKRTRRTTCTEYVISMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPYNNAQISPPGRSRRFYSKKVSPKVPTGSYDIAQVTYELNVLGTRGPRKMHCTMHSIPASSLEAGGTVPGQPEVVPRLLGDSFRSISFSKSVFNSTEFSSSRFSDIVGPRDEDETGKERPLILRNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATEPSSTATNQSQPNQHAQSSQSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 57228311 57232743 + XM_039029797.1 Bhi04g02131 33740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02131 430 Pfam Tub family 114 425 IPR000007 -
Bhi04g02131 430 ProSitePatterns Tub family signature 2. 415 430 IPR018066 -
Bhi04g02131 430 PRINTS Tubby superfamily signature 169 185 IPR000007 -
Bhi04g02131 430 PRINTS Tubby superfamily signature 185 209 IPR000007 -
Bhi04g02131 430 PRINTS Tubby superfamily signature 234 261 IPR000007 -
Bhi04g02131 430 PRINTS Tubby superfamily signature 328 345 IPR000007 -
Bhi04g02131 430 PRINTS Tubby superfamily signature 346 362 IPR000007 -
Bhi04g02131 430 PRINTS Tubby superfamily signature 387 406 IPR000007 -
Bhi04g02131 430 PRINTS Tubby superfamily signature 408 430 IPR000007 -
Bhi04g02131 430 PANTHER TUBBY-RELATED 1 430 - -
Bhi04g02131 430 Gene3D Tubby Protein; Chain A 112 424 IPR025659 -
Bhi04g02131 430 PANTHER TUBBY-LIKE F-BOX PROTEIN 10-RELATED 1 430 - -
Bhi04g02131 430 Pfam F-box domain 53 100 IPR001810 GO:0005515
Bhi04g02131 430 ProSitePatterns Tub family signature 1. 346 359 IPR018066 -
Bhi04g02131 430 SUPERFAMILY F-box domain 49 96 IPR036047 GO:0005515
Bhi04g02131 430 Gene3D - 48 101 - -
Bhi04g02131 430 SUPERFAMILY Tubby C-terminal domain-like 102 430 IPR025659 -
Bhi04g02131 430 MobiDBLite consensus disorder prediction 366 386 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01649 Bhi-Chr1:34648442 Bhi04g02131 Bhi-Chr4:57228311 0 dispersed
Bhi01g01650 Bhi-Chr1:34648597 Bhi04g02131 Bhi-Chr4:57228311 0 dispersed
Bhi04g01773 Bhi-Chr4:43071404 Bhi04g02131 Bhi-Chr4:57228311 0 dispersed
Bhi04g01774 Bhi-Chr4:43071404 Bhi04g02131 Bhi-Chr4:57228311 0 dispersed
Bhi04g02131 Bhi-Chr4:57228311 Bhi12g01742 Bhi-Chr12:56464738 7.13E-152 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1037 PF01167 Tub 2.00E-118 CL0395 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02131 K19600 - csv:101206041 858.211