Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02140 ACACGAACTGGAGGAACAAAACTTCCTCTAAAAGCGGTTTTATCATCGGCAAAATTCAACGAAGATGTCCCGATCGCTGGTGCAGCCGATCGGGCAGAAGAGGCTGACGAACGTGGCGGTGGTTCGTTTGAAGAAACACGGTCTTCGCTTTGAGATTGCCTGTTACAAGAACAAAGTCCTTTCTTGGCGCTCTGGCGTGGAAAAAGATTTGGATGAGGTCTTGCAATCGCAAATTGTTTATTCGAATGTTTCGAAAGGAGTTCTTGCAAAAACAAAAGATTTAAAAGCAGCTTTTGATACAGATGATCAGACGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTTCAAATTGCTGGGAAGGAGAGGGAGGCTCAATTATCAAATCAGTTTCGTGATATTGCTACCATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAGCGACTCATGCGGGAAATTCATTTTGCTGTTGATCCAAACCACAGCTCAAAGAAACAGGCATTAGAGGTCATTCATGAGCTCCAGAAACAGTTCCCCATTAAACGTTCACCTATGAGAATACGATATATTGTACCTGAACAGAACTTCCCATCTCTCCTTGATAAGTTAAATGCTTGGAGTGCTAGTATCATTTCCAATGATCAGTCTGGAAATCAACAACGAAGCATTATTTGTGAATTGGATCCTAGCTTTTATCGAGACTGTAATCCGTTAATGAGTGAACTACAAGGCAGATTTGAAGTTCTCTCTTTTTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATATGATGACGATTACGAGAATGTGGAACTGCCACCAAGGCAAGTAAAGGAATCAGAATCTGCTATTCCTCAGCTAAATGAAGCTTTACAAAAACAGACCATCTCTGTCAACAGCGAGAATGCCATGAAGGAAGGAAAACGCTGCAGCACATGCAATGTAGTCGTGGGGGATGCTACTCAGTTTAGAGAGCATCACAAGAGTGAATGGCATAAGCATAACGTCAAGCGCAAAACCAAGAATCTTCCGCCTCTGACTGAAGAAGAGTGTACGGTAGAATTGGCAATGGGCGATACGGAGTCTGACCTGAAGGAGTATTCATTTTGAACTACTTGCCGTGTTATGCTTTGTTGAATTGGTATTGTAAGGAACAATACTGTAATTGGCTAGTTATAGCTTGCACCTATTGAACAGTCTCAATGGATGTTTCAATGATGTTTAATATTGAATCAAAGATCATCTGTATACACTTTAATATAGGAAGTAGCTTTTTTTATATACAAGGATGTAAAGCCTGCAACTATGCTAGGATTGCAAA 1355 40.96 MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYIVPEQNFPSLLDKLNAWSASIISNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLNEALQKQTISVNSENAMKEGKRCSTCNVVVGDATQFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDTESDLKEYSF 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 57999528 58002543 + XM_039030449.1 Bhi04g02140 33749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02140 359 Gene3D - 1 96 IPR036786 -
Bhi04g02140 359 Pfam SBDS protein, domain II 111 171 IPR018978 GO:0042254
Bhi04g02140 359 ProSitePatterns Uncharacterized protein family UPF0023 signature. 46 65 IPR018023 -
Bhi04g02140 359 SUPERFAMILY beta-beta-alpha zinc fingers 288 329 IPR036236 -
Bhi04g02140 359 SUPERFAMILY Hypothetical protein AF0491, middle domain 98 171 IPR037188 -
Bhi04g02140 359 Gene3D - 100 172 IPR037188 -
Bhi04g02140 359 PANTHER BNAANNG06530D PROTEIN 1 359 - -
Bhi04g02140 359 ProSitePatterns Zinc finger C2H2 type domain signature. 300 322 IPR013087 -
Bhi04g02140 359 Gene3D - 174 251 - -
Bhi04g02140 359 PANTHER RIBOSOME MATURATION PROTEIN SBDS 1 359 IPR039100 -
Bhi04g02140 359 SMART ZnF_U1_5 295 329 IPR003604 GO:0003676|GO:0008270
Bhi04g02140 359 TIGRFAM RNA_SBDS: rRNA metabolism protein, SBDS family 13 231 IPR002140 GO:0042256
Bhi04g02140 359 SUPERFAMILY FYSH domain 13 96 IPR036786 -
Bhi04g02140 359 Pfam Shwachman-Bodian-Diamond syndrome (SBDS) protein 16 102 IPR019783 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02140 K14574 - csv:101215380 682.559