Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02156 ATGGCAATCTCCATTTTCTTCCTTAATAAAAACAAACCTTTCAATAATACCATCATCTTCTCAGAATCATCAATTTACTATCTCGTCTTCAACATCGTTTCTTCTCTCTTCTGCACCGTCCTTATTCTCCTCTCCACCGCAACCATCGTCTACACAGTCGCATGTGTCTATGCAGGACGTGACGTTTCATTCAAACACGTGATCGGCATCGTGTCTAAGGTTTGGAAGCGGCTTCTCCTCACCACTCTAAGTGTTTCCATATCTTTGCTTGGCCTCACCTTTGTTGCCTTCTTGGTCTTCTTTCTTATAGTTTTTTCAATAAATGGACCAAGAAATGGCTTGAGCTTTGGAAACTACACCATGACCATTGCTATCATATTCATGATAATTTTCTTTGTGGGAACTTCGTACTTACTATTAATATGGCAACTATCCAAGGTTGTGGCTGTTTTGGAAGAGCTTTGTGAGTTTAAAGAAATGGCCAAAAGTAAGGCTTTGGTTAAGGGGAAGATGAGAATGGTCATAAAACTATTCATTGTGTTGTCTTTTCCTATAGAAGTGGTTCAGCTTGTGTTTTCTCATTTGGTCATTCAATCAACAATCATTGGAATTGTGGGGAAAGTTGTTCTGATAATTATTTGGATGTTGTTGTTTTCACTCTTCCTTTTGGTCACCCTCGTGGCTCAAACTGTGCTATATTTCGTCTGCACATCATACCACCATGAGAATGTTGACAAGTCGTCTCTCTTGGACCTGCATCTTCAAAGGTATCTGCTCGCAGATTATGACCCGTTGAAGGTTGACGATGATGTTCGTGCTGAGAAATTACAAATTGTTTGA 840 39.76 MAISIFFLNKNKPFNNTIIFSESSIYYLVFNIVSSLFCTVLILLSTATIVYTVACVYAGRDVSFKHVIGIVSKVWKRLLLTTLSVSISLLGLTFVAFLVFFLIVFSINGPRNGLSFGNYTMTIAIIFMIIFFVGTSYLLLIWQLSKVVAVLEELCEFKEMAKSKALVKGKMRMVIKLFIVLSFPIEVVQLVFSHLVIQSTIIGIVGKVVLIIIWMLLFSLFLLVTLVAQTVLYFVCTSYHHENVDKSSLLDLHLQRYLLADYDPLKVDDDVRAEKLQIV 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 58537081 58537920 + XM_039030035.1 Bhi04g02156 33765

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02156 279 PANTHER OS08G0107100 PROTEIN-RELATED 19 267 - -
Bhi04g02156 279 PANTHER PROTEIN, PUTATIVE-RELATED 19 267 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02156 - - - cmax:111475723 241.506
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02148 Bhi-Chr4:58153158 Bhi04g02156 Bhi-Chr4:58537081 0 dispersed
Bhi04g02149 Bhi-Chr4:58160673 Bhi04g02156 Bhi-Chr4:58537081 1.62E-36 dispersed
Bhi04g02153 Bhi-Chr4:58394681 Bhi04g02156 Bhi-Chr4:58537081 7.85E-26 dispersed
Bhi04g02156 Bhi-Chr4:58537081 Bhi09g03591 Bhi-Chr9:89821950 8.21E-22 dispersed
Bhi04g02154 Bhi-Chr4:58402766 Bhi04g02156 Bhi-Chr4:58537081 4.10E-51 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1185 Blo01g01318 . Bda01g00686 . . . . Bma01g02103 . . . Cma09g01064 . . . Cpe06g00867 . Bhi04g02156 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo09g01073 . . . Car09g00967 . Cpe02g00865 . . . . . . . . . . . . . . Lsi08g00272 . Chy03g00836 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002545 0 2 0 0 0 2 2 2 2 2 2 2 3 2 3 3 3 0 1 2 2 2 0 5 4 0 6 2 3 0 57
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g02156 Bhi_Chr04 FPKM 125.28125 140.471359 808.026062 834.675537 16.729418 11.795793 15.707069 0.0 0.270163 0.0