Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02161 ATGGAGATGGAGCAATACAAGGTTTTGGCTCTGGGTTTCGTCTCTTTGATCTTGCTGCTTCGTCCACTATGGCTTGTTTCGGCTAACATGGAAGGTGATGCTTTGCATAGCCTAAGAACCAGCTTGCAGGATCCTAACAACGTCTTGCAGAGTTGGGATCCCACTCTTGTCAATCCCTGTACATGGTTTCATGTTACATGCAATAATGATAATAGTGTCATAAGAGTTGATCTTGGAAATGCAGCTTTATCGGGCACACTTGTTCCACAGCTTGGCTTGCTAAAAAATTTGCAGTATCTAGAGCTCTACAGTAATAACATAAGTGGAGTAATTCCGAGTGATTTGGGGAATCTGACTAGTTTGGTGAGCTTAGATCTTTATTTGAACAGATTTTCGGGTCCGATTCCGGACACATTGGGCAAGCTGTCAAAACTACGATTCCTCCGGCTGAACAACAACAGCTTATCAGGCCCCATTCCTATGTCATTGACTAATATTTCATCCCTCCAAGTGTTGGATCTATCGAATAACCATCTCTCAGGCGTGGTTCCGGATAATGGCTCCTTCTCCTTATTCACCCCCATCAGTTTTGCCAACAACTTGGATCTTTGTGGCCCTGTTACTGGCCATCCTTGCCCTGGATCTCCTCCATTTTCTCCTCCTCCACCCTTTGTTCCACCACCACCTATTTCTTCACCAGGAGGGAATAGTGCAACGGGAGCTATTGCTGGTGGAGTTGCTGCAGGTGCTGCTTTACTTTTTGCAGCTCCAGCAATTGCATTTGCATGGTGGCGTCGTAGGAAACCCCAAGAAGTTTTCTTTGACGTTCCTGCTGAAGAGGATCCTGAAGTGCATCTGGGACAGCTTAAAAGATTTTCACTTAGAGAACTACAAGTGGCAACTGATAGTTTTAGTAACAAGAACATACTTGGTCGGGGTGGATTTGGCAAAGTCTATAAAGGTCGATTGGCAGACGGTTCTTTAGTAGCTGTTAAAAGACTTAAGGAAGAACGTACGCCAGGTGGAGAGCTGCAGTTTCAAACAGAAGTAGAGATGATCAGCATGGCTGTGCATCGGAACCTGCTACGACTACGTGGATTTTGCATGACGCCAACTGAACGACTTCTTGTTTACCCCTACATGGCCAATGGAAGTGTTGCGTCTTGCTTAAGAGAACGACCACCATCTCAAGCACCTCTTGATTGGAGAACAAGAAAGCGAATTGCATTGGGATCTGCGAGAGGGCTGTCTTATTTGCATGATCACTGTGATCCGAAGATTATTCATCGTGATGTAAAAGCTGCAAATATTTTGCTGGATGAGGAGTTTGAAGCTGTTGTAGGGGACTTTGGGTTGGCCAAACTGATGGATTACAAAGATACTCATGTCACCACTGCGGTACGTGGTACGATTGGACATATAGCTCCTGAGTACCTTTCCACTGGGAAATCTTCTGAGAAAACAGATGTTTTCGGTTACGGTATCATGCTTTTAGAGCTTATCACTGGTCAAAGGGCTTTTGATTTGGCTCGACTCGCCAATGATGATGATGTCATGCTTCTTGATTGGGTGAAAGGACTCCTGAAAGAGAAGAAGCTAGAAATGCTGGTTGACCCTGATCTTCAGAATAATTATGTAGAATCTGAGGTAGAACAATTGATTCAAGTTGCCTTACTCTGCACACAAGGCTCCCCAATGGACCGACCGAAGATGTCCGAGGTGGTGAGAATGCTTGAAGGTGATGGATTGGCAGAAAGATGGGATGAGTGGCAAAAGGTGGAAATCCTTCGGCAAGAAATCGATCTATCACCCCATCCAAATTCCGATTGGATTGTTGATTCAACTGAAAATCTGCATGCAGTTGAGCTTTCTGGTCCAAGATGACCTCCCCATGGCTCAGTAAAGAAAAGGAATGATTTGTGACTTTAATTTTTACTTATAAATTTCTTCTACGTTTTTTTTCTTTTTTTTTTTTCCACCTTTTTGGTTTCTCTTTTCTTTCTTAGCAACCATATCCTAATTAATCTGTAACTGCATTTTGAAATTCATTTGTGCATCAGTAATCAGCCTTTGTCCATTTGCAAATTGTACCATCTTATAGTAACTCTCAACCCCAAGTGATGGTGTTTTATATTTTATCCATTTGCAA 2149 43.23 MEMEQYKVLALGFVSLILLLRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYLELYSNNISGVIPSDLGNLTSLVSLDLYLNRFSGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNHLSGVVPDNGSFSLFTPISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPPPISSPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEVFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQAPLDWRTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVESEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEILRQEIDLSPHPNSDWIVDSTENLHAVELSGPR 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 59044431 59055726 + XM_039028711.1 Bhi04g02161 33770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02161 627 Gene3D Ribonuclease Inhibitor 27 214 IPR032675 -
Bhi04g02161 627 SUPERFAMILY Protein kinase-like (PK-like) 283 579 IPR011009 -
Bhi04g02161 627 SMART serkin_6 304 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g02161 627 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Bhi04g02161 627 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Bhi04g02161 627 Gene3D Transferase(Phosphotransferase) domain 1 381 598 - -
Bhi04g02161 627 Pfam Protein kinase domain 305 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g02161 627 Pfam Leucine Rich Repeat 168 185 IPR001611 GO:0005515
Bhi04g02161 627 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 12 627 IPR031048 GO:0004675|GO:0005102|GO:0006468
Bhi04g02161 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Bhi04g02161 627 ProSiteProfiles Protein kinase domain profile. 304 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g02161 627 SUPERFAMILY L domain-like 32 195 - -
Bhi04g02161 627 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Bhi04g02161 627 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 627 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02445 Bhi-Chr1:60299092 Bhi04g02161 Bhi-Chr4:59044431 0 dispersed
Bhi01g02446 Bhi-Chr1:60299092 Bhi04g02161 Bhi-Chr4:59044431 0 dispersed
Bhi04g02161 Bhi-Chr4:59044431 Bhi11g01017 Bhi-Chr11:30394601 0 dispersed
Bhi12g02401 Bhi-Chr12:75894651 Bhi04g02161 Bhi-Chr4:59044431 5.61E-69 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87712 PF00069 Pkinase 5.10E-45 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02161 K13418 - csv:101208695 1143.26