Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02185 TTTAGGTTTCAATTTACCACAAAAAATCGAAAAGACTTCTCAATTCCTCAGAACTCACAGCCAGCTCAAATTCCTCACCGGAGCCATCATCAATGGCCGCCCTTCACCAAACCGCCGCCTCTCTCCAGGCCAAGCTCCTTCCAACCATCCGAATCTCCCGAACCACTCCCGTAAACCTCTCCTTCTCCGCCACTTTTCCTTCTCGCAGTCTCCGCCTCGGCCACCACCGCTCTCACGGCGGCGCAAAAATGTCCGCCACAGCCGCCGGAAGCTACGCCGCAGCGCTGGCCGAAGTCGCAGCCTCGAACAACACGCTGGACGCCACAAGCAGCGACGTGGAGAAGATCGAGAGCGTGTTCGCGGATTCGCAAGTGTTCGATTTCTTTGCGAATCCAACGATTGGCGTCGAGAAGAAACTAGAAGTGGTGGATGAAATCGCTACATCCTCATCTCTACAGCCGCATTCGGCGAATTTCTTGAAGATCCTGGTGGACGCAAAGAGGATCGACATCCTGAAAGAGATCGTGACGGAGTTTGAATTGGTTTACAACAAGATTACGAACACGGAGCTTGCGGTGGTGAGTTCGGTTGTGCAATTGGAGCAACAGCATTTGGCGCAGATCGCGAAGCAGGTGCAGAAATTGAGTGGAGCGAAGAATGTGAGGATAAAGACGCAGATCGATCCGAGTTTGGTGGCTGGATTCACAGTCAGGTTTGGAAATTCTGGATCAAAACTTATTGATTTGAGCGTCAAGAAACAGCTCGAGGAAATTGCTGCTCAGATTGATCTTGGCAATATTCAACTGGCTGTATAAATTTACAAATGCATTTTGTGAATTTTTTGCTTTTTGTTGAGTGGTAATTATTGAGACTATATATAAATATATATATGTGATGTAATTTATTCGAATTGCTTTGAATCCTTAATTTGGTAATTTTGTAAATTTCTTGGCCGCAAGGTCGTGTTTGTTGGAACTATCATACTTGTATGATTTAAATTCTAAATGAGAAGGAAAAAAAAACCCTTGAAATTTGTAA 1038 45.76 MAALHQTAASLQAKLLPTIRISRTTPVNLSFSATFPSRSLRLGHHRSHGGAKMSATAAGSYAAALAEVAASNNTLDATSSDVEKIESVFADSQVFDFFANPTIGVEKKLEVVDEIATSSSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQIDLGNIQLAV 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 60082282 60083319 + XM_039028074.1 Bhi04g02185 33794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02185 240 Hamap ATP synthase subunit delta [atpD]. 53 233 IPR000711 GO:0015986|GO:0046933
Bhi04g02185 240 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 58 230 IPR000711 GO:0015986|GO:0046933
Bhi04g02185 240 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 190 209 IPR020781 GO:0015986|GO:0016020|GO:0046933
Bhi04g02185 240 Pfam ATP synthase delta (OSCP) subunit 58 230 IPR000711 GO:0015986|GO:0046933
Bhi04g02185 240 PRINTS ATP synthase delta subunit signature 57 76 IPR000711 GO:0015986|GO:0046933
Bhi04g02185 240 PRINTS ATP synthase delta subunit signature 126 137 IPR000711 GO:0015986|GO:0046933
Bhi04g02185 240 PRINTS ATP synthase delta subunit signature 137 151 IPR000711 GO:0015986|GO:0046933
Bhi04g02185 240 PRINTS ATP synthase delta subunit signature 188 203 IPR000711 GO:0015986|GO:0046933
Bhi04g02185 240 PRINTS ATP synthase delta subunit signature 206 224 IPR000711 GO:0015986|GO:0046933
Bhi04g02185 240 PANTHER BNACNNG66500D PROTEIN 47 239 - -
Bhi04g02185 240 Gene3D - 54 158 IPR026015 -
Bhi04g02185 240 PANTHER ATP SYNTHASE DELTA CHAIN 47 239 IPR000711 GO:0015986|GO:0046933
Bhi04g02185 240 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 54 157 IPR026015 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00520 Bhi-Chr1:9282140 Bhi04g02185 Bhi-Chr4:60082282 5.58E-19 dispersed
Bhi04g02185 Bhi-Chr4:60082282 Bhi09g00636 Bhi-Chr9:13620797 3.28E-07 dispersed
Bhi04g02185 Bhi-Chr4:60082282 Bhi11g01390 Bhi-Chr11:40701556 5.17E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02185 K02113 - csv:101211740 400.208