Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02187 AGAATCATATCTCAACTCAGCACTCAGACAAGCTCTAGAGCAGTGAAATTATTTCATCTGTGAGAACAAAAAATCAGCGCCGTGAAGGCATCGCCAGAAACGCGCTTTGGGTTTGAACTTCGAAGTCTGGGTTACATTGCATTCATACTCCTTACCTATCAAATTCCGATAAACACTTTGACAAATTGGAAGAGTTTGATCGACAATATGGACGGCCCCCCTGTGGGCGATATCTGTTCCATTTGCCATGGAAGATTCAACACCCCTTGCCAAGCAAATTGCTCGCACTGGTTCTGCGGAAAGTGTATAATGCTTGTCTGGGATCATGGATCACCCCTACAGCCGTGTAAATGCCCCTTATGTCGCCGGCAAATCACTTTATTAGTTCCTTCTGAGGTTTCCCCAATTCAGCAAAGTGACCCCGAGGTTGAACGTGTTCTTAACAATATAAGGACTTATAACCGTCATTTTGGTGGCAACTCAACTGGTTTAAGTCAGCGACTGCAGGACCTTCCCTTTCTCCTACGGAGGTTGCTTCGGGAACTCCTCAATCCACAGAGATCTCTTCCTCTTGTCATTAGAACACGTGTTTATACTGCAATGGTACTAAGTGTAGTCTACGCTGTGAGTCCCATCGATATCATACCAGAAGCATTACTAGGATTATTTGGACTGATGGATGATATCTTTATACTGCTCATCTGCTTCCTTTACATCGCTGCGATATATCGATCGGTACTTTATAATCGGCATGGAGGAACTTGAGTTACCTTTGGTTGCTTTTCCAAGAACTGATCTAGCTCAAAGTTGTAAAGTCGTTTGCGCATACACCAAACCAATCTTGCAAAGAAATTGCAATTTAGTTTCGGCGACATGTGATAGAGGGAGTAGTAATTGCAATATGATCCAAATCAGTGCTACAAAATATAATTTGCTAAAATATCATTTCTCGACAACCATACCAAAAACTTGATGAAGTGAAAACGTGTTGCTTCAATTAGCTAAGTCTAGTGTAAATGCACTCTATCAAGTGGATAGTAAATAATAAATATTCAAAGTAGT 1062 41.43 MDGPPVGDICSICHGRFNTPCQANCSHWFCGKCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEVSPIQQSDPEVERVLNNIRTYNRHFGGNSTGLSQRLQDLPFLLRRLLRELLNPQRSLPLVIRTRVYTAMVLSVVYAVSPIDIIPEALLGLFGLMDDIFILLICFLYIAAIYRSVLYNRHGGT 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 60164936 60172005 + XM_039028793.1 Bhi04g02187 33796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02187 185 Pfam Protein of unknown function (DUF1232) 130 164 IPR010652 -
Bhi04g02187 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 103 IPR013083 -
Bhi04g02187 185 SUPERFAMILY RING/U-box 8 59 - -
Bhi04g02187 185 PANTHER UNCHARACTERIZED 3 184 IPR038896 GO:0061630
Bhi04g02187 185 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Bhi04g02187 185 ProSiteProfiles Zinc finger RING-type profile. 10 53 IPR001841 -
Bhi04g02187 185 PANTHER BNAC07G13660D PROTEIN 3 184 - -
Bhi04g02187 185 SMART ring_2 10 52 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02186 Bhi-Chr4:60164915 Bhi04g02187 Bhi-Chr4:60164936 3.76E-92 tandem
Bhi04g02187 Bhi-Chr4:60164936 Bhi04g02188 Bhi-Chr4:60164936 2.96E-136 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02187 K15707 - cmo:103501307 342.428