Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02248 ATGGATACCAAAGGTCGACTCATTGCTGGTTCCCACAACAGAAATGAGTTTGTTCTCATCAATGCTGATGAGGTTGCAAGAGTGACATCTGTGAAGGAGTTGAGTGGGCAAATTTGCCAGATCTGTGGGGATGAGATAGAAATCACCGTAGATGGAGAGCCATTTGTTGCCTGTAATGAATGTGCCTTTCCAGTTTGTAGACCTTGCTATGAGTATGAAAGAAGAGAGGGCAATCAAGCTTGTCCTCAGTGCAAGACCAGATACAAGCGTCTTAAAGGCAGTCCTCGGGTTGAAGGTGATGAAGAAGAAGATGATATCGATGATCTTGAGAATGAGTTTGACATTGCAAACAAGGATCCTAACAGTGCATCTGAGGCAATGCTCTATCCTCACCTTGCCGTTGGGCGTGGTTCTCATGCTAATGGTTCTGGAAATATGGCTACCGACCTTGACTCCTCATCCATCCCGACTGATATCCCTCTCCTCACCTATGGCCAGGAGGATGCTGGAATTTCCTCCGATAAGCATGCTCTAATTATTCCTCCTTTTATTAGCCGTGGGAAAAAGGTCCATCCGGTGCCATTCACTGATTCTGCCATGTCTGCCAATCCAAGGCCAATGGATCCAAAAAAGGATTTAGCTGTGTATGGATATGGAACTGTTGCGTGGAAGGAAAGAATGGAAGACTGGCGGAAGAAACAAAATGAAAGACTTCAAGTAATTAAGCATGAGGGTGGAGGTGGAAAAGGTGACGATGAGCTTGATGATACAGATTTGCCTATGATGGATGAAGGGAGGCAACCACTTTCCAGAAAACTACCAATCCCCTCGAGCAAGATAAACCCATACAGAATGATAATTGTACTTCGTATTGTCATCCTTTGCCTCTTTTTCCACTATCGTATTCTTCATCCTGTCCATGAGGCATATGGGCTGTGGTTAACATCAGTAATCTGTGAGATATGGTTTGCTGCATCATGGATATTGGATCAGTTCCCAAAATGGTGCCCCATTGTCCGAGAAACTTACCTTGATCGGTTATCGTTAAGATACGAAAAAGATGGCAAGCCATCAGAATTGGCTTCTATTGATGTTTATGTCAGTACGGTGGATCCGATGAAGGAGCCTCCTCTCATCACAGCAAACACCGTCCTGTCCATTCTTGCCGTCGATTATCCAGTAGACAAGGTTTCATGCTACGTTTCTGATGATGGTGCTGCCATGCTTACTTTTGAAGCCCTCTCAGAAACTTCCGAGTTTGCAAGAAAGTGGGTTCCTTTCTGCAAGAAGTTCAATATTGAACCTCGGGCCCCAGAATGGTATTTTGCCCAGAAGGTCGACTATTTGAAAGACAAAGTTGATCCAACATTTGTCAGGGAACGACGTGCAATGAAGAGGGACTATGAAGAATTCAAAGTTCGAATCAATGGGCTTGTTGCCATGGCACAAAAAGTTCCTGAAGATGGTTGGACAATGCAGGACGGAACTCCATGGCCTGGGAACAACGTCCGGGATCATCCTGGAATGATTCAGGTATTCCTCGGTCAAAACGGTGTTCGCGACTTGGAGGGAAATGAATTACCTCGTCTAGTGTATGTATCTCGTGAGAAGAGGCCAGGATTTGATCACCACAAGAAAGCTGGTGCCATGAATTCTCTGGTGCGTGTCTCGGCAATTATCTCGAATGCTCCATACATTTTGAACGTCGATTGTGATCACTACATCAACAATAGCAAGGCACTTAGAGAAGCAATGTGCTTCATGATGGACCCAATTTCGGGAAAAAGAATATGCTATGTGCAGTTTCCACAAAGATTTGATGGGATTGATAGGCACGATCGATACTCAAATCGCAATGTTGTATTCTTCGATATCAACATGAAAGGATTGGATGGTATTCAAGGGCCGATATACGTCGGAACTGGATGTGTCTTTAGGAGGCAGGCTCTTTATGGGTATGATGCCCCTGCTAAGAAGAAAGCACCAAGAAGGACTTGCAACTGTCTTCCAAAATGGTGTTGCTGTTGCTGTGGAACTAGAAAGAAGACTAAAACAAAGACCAGCGATAAAAAGAAGTTAAAGACCAAAGATACGTCAAAACAGATTCATGCACTTGAAAATATTGAGGAAGGAATTGAAGGAATAGATAATGAAAAATCATCTCTGATGCCCCAAGTTAAGTTTGAGAAGAAGTTTGGGCAATCACCATCATTCATTGCTTCCACACTTATGGAAGATGGCGGCGTGCCTGGAGGAGGGACTTCTGCTTCATTGTTGAAAGAAGCCATCCACGTAATCAGTTGCGGTTATGAAGATAAATCCGAGTGGGGTAAAGAGGTAGGGTGGATATATGGGTCTGTTACAGAGGATATTTTAACAGGTTTCAAGATGCATTGCCATGGATGGAGATCAGTTTATTGCATTCCTAAAAGGCCAGCATTTAAGGGTTCAGCTCCTATTAACTTGTCTGATCGTCTACACCAAGTTCTTCGGTGGGCTCTTGGGTCTGTTGAAATTCTGTTGAGTAGGCACTGTCCAATATGGTACGGCTATGGATGTGGTTTGAAGTGGCTCGAGCGTTTCTCGTACATAAACTCCGTTGTTTATCCATTGACGTCAGTTCCACTGATCGCTTATTGTACACTGCCAGCTGTCTGCCTGCTTACAGGGCAGTTTATCGTTCCCGAGCTAAGCAACTATGCTAGTATCATTTTCATGGCACTTTTCATCTCTATAGCAGCGACCGGTATCCTAGAAATGCAGTGGGGAGGTGTTGGGATCCATGATTGGTGGAGAAACGAGCAGTTCTGGGTTATCGGTGGTGCTTCGTCACATCTTTTTGCACTTTTTCAGGGTCTGCTAAAGGTTTTGGCTGGTGTTAACACAAATTTCACCGTCACATCCAAAGGAGGAGATGATGGCGAGTTTGCTGAGCTTTACCTCTTCAAGTGGACGTCATTGTTGGTCCCTCCCTTGACCTTATTGATCATAAACATTATCGGAGTTGTCGTCGGAATTTCAGATGCCATCAACAATGGTTACGACTCATGGGGCCCGCTCATCGGTAAGCTGTTCTTTGCATTCTGGGTGATTGTCCATCTGTATCCATTCCTCAAGGGTTTGATGGGGAAGCAAGACAAGGTACCAACCATTATCATTGTGTGGTCAATCCTTCTATCATCCATATTGTCGCTTCTATGGGTCCGAATCAACCCCTTCCTCGACAAGGGTGGGATTGTGTTGGAAGTTTGTGGGTTAAACTGTGACGACTAAGATGCCGAAATACACACGACATGAAGGATTACGGGTAGGAGCTGTGTTTTGAATTTGTACGGTTGCGCATTGGGACTAACTGGTCTCGAACATGCGTTGAATAGAATACGGTAACAGTCACTCCACCCGAGATTGTGAAGCATGAGTCAAAAGAAAGATGAGTTGCAAAAGGCTACTTGTCCTGGATTGTAGATATGGAGGAATTTGCATATCACACATCATCAAAATATTTGTTCTCTCTGCAAACTTTGTCATTGATTCTTTTCTTCTTCTTCTATACATGGTTTTTATTTTGTGAAAGGGACTGTAATTTATATTTTGTGTCTGTGAAATCCAAGAGCACATAAACATAAAAAAAGGAGGTGGGTGTTGTTAGTTTGATTCTTCATAAATTCATCCCTTCTCAACAAGGGATTTCCCATTCCCTTAGGTGGTTTTGTCAAGATTAAGATTATTGTTGTTGTATCCTTTGTTGTTTGTAAATCTCTCTCTTCACTCAATCAGGGTTCAGTTTTTTCTATTTTTATGGTTTCAATTTTAAACTATCCAAATTCTGTCTTGTATCACAACAATTATAGTTGTCATCTTAATGCAATAATGAAGGACTTCCATGCATCCCTTCTC 3897 43.21 MDTKGRLIAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITVDGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRLKGSPRVEGDEEEDDIDDLENEFDIANKDPNSASEAMLYPHLAVGRGSHANGSGNMATDLDSSSIPTDIPLLTYGQEDAGISSDKHALIIPPFISRGKKVHPVPFTDSAMSANPRPMDPKKDLAVYGYGTVAWKERMEDWRKKQNERLQVIKHEGGGGKGDDELDDTDLPMMDEGRQPLSRKLPIPSSKINPYRMIIVLRIVILCLFFHYRILHPVHEAYGLWLTSVICEIWFAASWILDQFPKWCPIVRETYLDRLSLRYEKDGKPSELASIDVYVSTVDPMKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKFNIEPRAPEWYFAQKVDYLKDKVDPTFVRERRAMKRDYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDLEGNELPRLVYVSREKRPGFDHHKKAGAMNSLVRVSAIISNAPYILNVDCDHYINNSKALREAMCFMMDPISGKRICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPAKKKAPRRTCNCLPKWCCCCCGTRKKTKTKTSDKKKLKTKDTSKQIHALENIEEGIEGIDNEKSSLMPQVKFEKKFGQSPSFIASTLMEDGGVPGGGTSASLLKEAIHVISCGYEDKSEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKWLERFSYINSVVYPLTSVPLIAYCTLPAVCLLTGQFIVPELSNYASIIFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKGGDDGEFAELYLFKWTSLLVPPLTLLIINIIGVVVGISDAINNGYDSWGPLIGKLFFAFWVIVHLYPFLKGLMGKQDKVPTIIIVWSILLSSILSLLWVRINPFLDKGGIVLEVCGLNCDD 1090
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 61428973 61435110 - XM_039030248.1 Bhi04g02248 33857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02248 1090 SUPERFAMILY Nucleotide-diphospho-sugar transferases 376 872 IPR029044 -
Bhi04g02248 1090 Pfam Zinc-binding RING-finger 30 105 IPR027934 -
Bhi04g02248 1090 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 112 IPR013083 -
Bhi04g02248 1090 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Bhi04g02248 1090 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Bhi04g02248 1090 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 509 655 IPR029044 -
Bhi04g02248 1090 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1088 - -
Bhi04g02248 1090 Pfam Cellulose synthase 363 1077 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bhi04g02248 1090 PANTHER CELLULOSE SYNTHASE 1 1088 - -
Bhi04g02248 1090 SUPERFAMILY RING/U-box 28 107 - -
Bhi04g02248 1090 Coils Coil 99 119 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01403 Bhi-Chr3:29431048 Bhi04g02248 Bhi-Chr4:61428973 0 dispersed
Bhi04g02248 Bhi-Chr4:61428973 Bhi09g00640 Bhi-Chr9:13698495 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02248 K10999 - csv:101214061 2119.74