Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02252 TCTATTTCCCACTCCACACTACAAACTTCACAAAAAACCCATCTTCTCCATTCTTATGCCAATGGCTCCCTCACCAATCTCTTCTCTTTCAATCTTCTTCCTCATTTTCCTTCCTTCAATCTCCGCCGATTACGGCCACGCCACCTTCTATGGCGGCGGTGACGCTTCCGGCACAATGGGTGGTGCTTGTGGGTATGGGAATTTGTACAGTCAAGGATATGGAACGAACACGGCGGCGCTCAGTACTGCTCTGTTCAACAATGGCCTCAGCTGTGGGTCCTGCTATGAAATTTCTTGCAACAGTGATCCTAAATGGTGTCTTCCTGGAAAAATCATCGTCACTGCCACTAATTTCTGTCCACCAAACTTTGCTCTGTCCAACGACAATGGTGGCTGGTGCAACCCTCCTCTGCAACACTTCGATTTGGCTGAGCCTGCTTTTCTCCAAATCGCTCAGTACCGTGCTGGCATCGTCCCTGTTTCCTTCCAAAGAGTACCATGTATGAAGAAGGGAGGAATAAGATTCACCATAAACGGACATTCATATTTCAACTTGGTTCTGATCACCAACGTGGGCGGCGCCGGCGACGTCCACTCTGTGTCAATCAAAGGTTCCAAAACAGGGTGGCAAGCAATGTCCAGAAATTGGGGACAGAATTGGCAGAGCAACAATTACTTAAACGGACAGAGCCTCTCTTTCCAAGTCACCACCAGCGACGGCCGTACCGTCACTAGCTACGACGCTGTTCCGGCCAACTGGCAGTTCGGGCAGACATTCGAAGGAGGCCAATTCTAAAATAAAAGTTTAGAGAGGGTATGACAGGGTAGAGTAGGAAGATCTCCGGCCGCCCGTCACGGTGGCCGGTTATTGCAGTGGTGGTTGACTTACACCCGCTAGGTCTTTGGGATTTCAAAAAATACATATATAAATATATTAAAAAAAAACATATATTTATATGATATATATATATATATATATAGGAAAATACTGTGTGTAGAAGAAAAATGGTTCAAGGAAGAAGGAGTTTTGGGTTTTAGGGAAAGAAAAAATGTCTCATTCCCATTGGCTATCTTTAGAAAAGAATTGTTGATTTAGTCCTCTCAATTTATTAATATGAGGGCATTGTATTACTGTTTTTCCCCCCTTAGAAATTAAGGTTTAAATTGAAATTTTTATTTTCTCCA 1185 44.05 MPMAPSPISSLSIFFLIFLPSISADYGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEISCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFEGGQF 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 61638069 61639475 + XM_039028172.1 Bhi04g02252 33861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02252 246 PANTHER EXPANSIN-A15 25 246 IPR002963 GO:0009664
Bhi04g02252 246 SMART dpbb_1 59 144 IPR007112 -
Bhi04g02252 246 PRINTS Expansin signature 54 68 IPR002963 GO:0009664
Bhi04g02252 246 PRINTS Expansin signature 81 92 IPR002963 GO:0009664
Bhi04g02252 246 PRINTS Expansin signature 93 103 IPR002963 GO:0009664
Bhi04g02252 246 PRINTS Expansin signature 112 129 IPR002963 GO:0009664
Bhi04g02252 246 PRINTS Expansin signature 129 142 IPR002963 GO:0009664
Bhi04g02252 246 PRINTS Expansin signature 153 165 IPR002963 GO:0009664
Bhi04g02252 246 PRINTS Expansin signature 165 186 IPR002963 GO:0009664
Bhi04g02252 246 PRINTS Expansin signature 200 221 IPR002963 GO:0009664
Bhi04g02252 246 PRINTS Expansin signature 229 245 IPR002963 GO:0009664
Bhi04g02252 246 SUPERFAMILY PHL pollen allergen 151 243 IPR036749 -
Bhi04g02252 246 Pfam Lytic transglycolase 59 144 IPR009009 -
Bhi04g02252 246 Gene3D - 153 246 IPR036749 -
Bhi04g02252 246 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 42 154 IPR007112 -
Bhi04g02252 246 SUPERFAMILY Barwin-like endoglucanases 14 172 IPR036908 -
Bhi04g02252 246 PANTHER EXPANSIN 25 246 - -
Bhi04g02252 246 Pfam Expansin C-terminal domain 155 232 IPR007117 -
Bhi04g02252 246 Gene3D - 21 150 IPR036908 -
Bhi04g02252 246 PRINTS Expansin/Lol pI family signature 23 38 IPR007118 GO:0005576
Bhi04g02252 246 PRINTS Expansin/Lol pI family signature 41 59 IPR007118 GO:0005576
Bhi04g02252 246 PRINTS Expansin/Lol pI family signature 63 81 IPR007118 GO:0005576
Bhi04g02252 246 PRINTS Expansin/Lol pI family signature 137 153 IPR007118 GO:0005576
Bhi04g02252 246 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Bhi04g02252 246 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Bhi04g02252 246 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 243 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02252 Bhi-Chr4:61638069 Bhi07g00459 Bhi-Chr7:20231745 1.03E-149 dispersed
Bhi04g02252 Bhi-Chr4:61638069 Bhi07g01546 Bhi-Chr7:44523309 1.67E-142 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02252 - K20628 csv:101217496 490.345