Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02286 ATTTCCTCCTCCACTTTCACGGCCCGATTTCAAACCTTGTTTCCATTCCCAAGAGCACAAACATCATCTTCGCCAAAAACTAAGAAAACCATTTCAGGGCAACAGAATTTGCAAATAACCAAAGAGAAAACAAAGAAAAGCTTCAGAGAAATTGCTGAATCAGAGAAGGAACAAGGAAAAACATCAAAGGAAGAAGAAACCTCATACATACTTCAAAAGGGATTCTTCATCTCGTATGATATCAGAGACGATTGAGAGGAAGAGGAAGTCACGGAGTAGACGAGATCGATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAAGCTTATAATGAATGTTTTGATTCTTGTAATGATGGTGGCAAGCCAATTCGTAAAGCTCCGGCAAAAGGGTCTAAGAAGGGATGTATGAAAGGCAAAGGAGGACCCTTAAATTCACATTGCAATTACAGAGGTGTGAGGCAGAGGACTTGGGGCAAATGGGTTGCAGAGATTCGTGAACCCAACAGAGGGAGTAGACTGTGGCTTGGTACTTTCCCTACCGCCGTTGAAGCCGCTCTCGCCTACGATGAGGCTGCAAGGACGATGTACGGCCAAAGTGCTCGTTTAAACCTTCCCAACATTAAGAACAGAGGGCAGCTACAAGGGATTCTTTTGGACGATTACTTGGGACTGCGTAACTCGGATTCTTCAACAGCTACGTCGACATGTTCTGAATCAACTACTACAATCTCGAACCAATCTGAGGTCTGCGTGCCTGAGGAGTTCACAATGAGGCCAAAACTTGTCCCCCAAAACATTAAGATTGAAGATGGAGAAGGTGAATCGAGGACCGGGGATCACAGTGATGACACTGCAACGCCGATGTGCTTAGAGAATCAAGTGAAACATGAGGATTGTAATGATCAGGCAGTTGGATTAGGAACTGAGTTCCCTAGCTTCGATCAGTTGCAGAACTTCCAAATGGACGAAATGCTCCAGCCGAGGACTGGGAATCAGGCCAATCATATGGCGATGCCAATGAGCTTAGAGAAGCAGGTGAAGGATGAAGATCTCAATTCTATATATCGTGATTGGCGCAATGATCAAGCAGTCTTATCAGAAGCTGGGATTTCTTGTCTGAATGATCTGCATAACTTTCAAATGGATGAAATGTTTGATGTGGAAGAGCTTCTAAGCCTAATAAGTAGTGATTCATTGTATGATCCAAGCATCTTGAAAGGCAATGCAGATGGTTATACTAACATGACGCCTTCACAAGTGAGCAATCAAGGGCCTGAGAAGCCATCAAGTTGGTCATATCAATTCCAAAATCCAGACGTGAAGCTACTCGGAAGTCTCCAACAGACAGAGCTGGCCGATGTCGACTATGGATTTGATTTCTTGAAGCAGGGGAGGGAGGAGGATCTGAATGCGGCAGCGGATGATTGTGTCCGATACCTGAACGAGATTGGTGATTTAGGTTTTTGAGGGGTATATTTTTGGTTGAAGGATTAGGAGTAAAAAAAAAAAAGAAAATGAAAAAGAAAAAACCACATGAACATTGCTGGCTCTCTATTTATGTTTGTGTAAAATACGTTAGTATTTGAAGCTGACAAATTCTCCATAGGTTTTAGTTTGGAGAATATGTGACGCGTGATTCACATACGAGGTTATTTACAGCTACTTTTATTTAGATCTAACAATGTTCTTTCAACTAGTGTAATAAGGCTTCTTCCTTCCAAGGATGAATGATGATTCGTTTTGCTCTTGTAAATTATATATGTTGTACATATTATATATACACATACATTGTAAATTTTTCTTCAA 1807 41.89 MISETIERKRKSRSRRDRSTVAETLAKWKAYNECFDSCNDGGKPIRKAPAKGSKKGCMKGKGGPLNSHCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAVEAALAYDEAARTMYGQSARLNLPNIKNRGQLQGILLDDYLGLRNSDSSTATSTCSESTTTISNQSEVCVPEEFTMRPKLVPQNIKIEDGEGESRTGDHSDDTATPMCLENQVKHEDCNDQAVGLGTEFPSFDQLQNFQMDEMLQPRTGNQANHMAMPMSLEKQVKDEDLNSIYRDWRNDQAVLSEAGISCLNDLHNFQMDEMFDVEELLSLISSDSLYDPSILKGNADGYTNMTPSQVSNQGPEKPSSWSYQFQNPDVKLLGSLQQTELADVDYGFDFLKQGREEDLNAAADDCVRYLNEIGDLGF 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62588823 62591137 + XM_039030708.1 Bhi04g02286 33895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02286 410 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Bhi04g02286 410 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Bhi04g02286 410 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 7 308 - -
Bhi04g02286 410 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 7 308 - -
Bhi04g02286 410 Pfam AP2 domain 69 119 IPR001471 GO:0003700|GO:0006355
Bhi04g02286 410 SUPERFAMILY DNA-binding domain 70 127 IPR016177 GO:0003677
Bhi04g02286 410 MobiDBLite consensus disorder prediction 332 353 - -
Bhi04g02286 410 ProSiteProfiles AP2/ERF domain profile. 70 127 IPR001471 GO:0003700|GO:0006355
Bhi04g02286 410 CDD AP2 69 128 IPR001471 GO:0003700|GO:0006355
Bhi04g02286 410 Gene3D AP2/ERF domain 70 128 IPR036955 GO:0003700|GO:0006355
Bhi04g02286 410 SMART rav1_2 70 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00212 Bhi-Chr4:5156137 Bhi04g02286 Bhi-Chr4:62588823 6.77E-29 dispersed
Bhi04g02286 Bhi-Chr4:62588823 Bhi10g01210 Bhi-Chr10:26540543 1.08E-48 dispersed
Bhi04g02286 Bhi-Chr4:62588823 Bhi04g02287 Bhi-Chr4:62588823 0 tandem
Bhi03g02183 Bhi-Chr3:47468708 Bhi04g02286 Bhi-Chr4:62588823 3.32E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1055 PF00847 AP2 2.40E-14 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02286 - K09286 csv:101215431 643.269