Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02287 ATTTCCTCCTCCACTTTCACGGCCCGATTTCAAACCTTGTTTCCATTCCCAAGAGCACAAACATCATCTTCGCCAAAAACTAAGAAAACCATTTCAGGGCAACAGAATTTGCAAATAACCAAAGAGAAAACAAAGAAAAGCTTCAGAGAAATTGCTGAATCAGAGAAGGAACAAGGAAAAACATCAAAGGAAGAAGAAACCTCATACATACTTCAAAAGGGATTCTTCATCTCGTATGATATCAGAGACGATTGAGAGTTGAAAATGGTCGAGAAAATGGGTATCGGTTATCCATATTCTGATTCAATTTCTTTACCTACCAATTCGGTTAGGAAGAGGAAGTCACGGAGTAGACGAGATCGATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAAGCTTATAATGAATGTTTTGATTCTTGTAATGATGGTGGCAAGCCAATTCGTAAAGCTCCGGCAAAAGGGTCTAAGAAGGGATGTATGAAAGGCAAAGGAGGACCCTTAAATTCACATTGCAATTACAGAGGTGTGAGGCAGAGGACTTGGGGCAAATGGGTTGCAGAGATTCGTGAACCCAACAGAGGGAGTAGACTGTGGCTTGGTACTTTCCCTACCGCCGTTGAAGCCGCTCTCGCCTACGATGAGGCTGCAAGGACGATGTACGGCCAAAGTGCTCGTTTAAACCTTCCCAACATTAAGAACAGAGGGCAGCTACAAGGGATTCTTTTGGACGATTACTTGGGACTGCGTAACTCGGATTCTTCAACAGCTACGTCGACATGTTCTGAATCAACTACTACAATCTCGAACCAATCTGAGGTCTGCGTGCCTGAGGAGTTCACAATGAGGCCAAAACTTGTCCCCCAAAACATTAAGATTGAAGATGGAGAAGGTGAATCGAGGACCGGGGATCACAGTGATGACACTGCAACGCCGATGTGCTTAGAGAATCAAGTGAAACATGAGGATTGTAATGATCAGGCAGTTGGATTAGGAACTGAGTTCCCTAGCTTCGATCAGTTGCAGAACTTCCAAATGGACGAAATGCTCCAGCCGAGGACTGGGAATCAGGCCAATCATATGGCGATGCCAATGAGCTTAGAGAAGCAGGTGAAGGATGAAGATCTCAATTCTATATATCGTGATTGGCGCAATGATCAAGCAGTCTTATCAGAAGCTGGGATTTCTTGTCTGAATGATCTGCATAACTTTCAAATGGATGAAATGTTTGATGTGGAAGAGCTTCTAAGCCTAATAAGTAGTGATTCATTGTATGATCCAAGCATCTTGAAAGGCAATGCAGATGGTTATACTAACATGACGCCTTCACAAGTGAGCAATCAAGGGCCTGAGAAGCCATCAAGTTGGTCATATCAATTCCAAAATCCAGACGTGAAGCTACTCGGAAGTCTCCAACAGACAGAGCTGGCCGATGTCGACTATGGATTTGATTTCTTGAAGCAGGGGAGGGAGGAGGATCTGAATGCGGCAGCGGATGATTGTGTCCGATACCTGAACGAGATTGGTGATTTAGGTTTTTGAGGGGTATATTTTTGGTTGAAGGATTAGGAGTAAAAAAAAAAAAGAAAATGAAAAAGAAAAAACCACATGAACATTGCTGGCTCTCTATTTATGTTTGTGTAAAATACGTTAGTATTTGAAGCTGACAAATTCTCCATAGGTTTTAGTTTGGAGAATATGTGACGCGTGATTCACATACGAGGTTATTTACAGCTACTTTTATTTAGATCTAACAATGTTCTTTCAACTAGTGTAATAAGGCTTCTTCCTTCCAAGGATGAATGATGATTCGTTTTGCTCTTGTAAATTATATATGTTGTACATATTATATATACACATACATTGTAAATTTTTCTTCAA 1881 41.63 MVEKMGIGYPYSDSISLPTNSVRKRKSRSRRDRSTVAETLAKWKAYNECFDSCNDGGKPIRKAPAKGSKKGCMKGKGGPLNSHCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAVEAALAYDEAARTMYGQSARLNLPNIKNRGQLQGILLDDYLGLRNSDSSTATSTCSESTTTISNQSEVCVPEEFTMRPKLVPQNIKIEDGEGESRTGDHSDDTATPMCLENQVKHEDCNDQAVGLGTEFPSFDQLQNFQMDEMLQPRTGNQANHMAMPMSLEKQVKDEDLNSIYRDWRNDQAVLSEAGISCLNDLHNFQMDEMFDVEELLSLISSDSLYDPSILKGNADGYTNMTPSQVSNQGPEKPSSWSYQFQNPDVKLLGSLQQTELADVDYGFDFLKQGREEDLNAAADDCVRYLNEIGDLGF 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62588823 62591137 + XM_039030707.1 Bhi04g02287 33896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02287 425 SUPERFAMILY DNA-binding domain 85 142 IPR016177 GO:0003677
Bhi04g02287 425 SMART rav1_2 85 148 IPR001471 GO:0003700|GO:0006355
Bhi04g02287 425 Pfam AP2 domain 84 134 IPR001471 GO:0003700|GO:0006355
Bhi04g02287 425 MobiDBLite consensus disorder prediction 347 368 - -
Bhi04g02287 425 CDD AP2 84 143 IPR001471 GO:0003700|GO:0006355
Bhi04g02287 425 Gene3D AP2/ERF domain 85 143 IPR036955 GO:0003700|GO:0006355
Bhi04g02287 425 ProSiteProfiles AP2/ERF domain profile. 85 142 IPR001471 GO:0003700|GO:0006355
Bhi04g02287 425 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Bhi04g02287 425 PRINTS Ethylene responsive element binding protein signature 108 124 IPR001471 GO:0003700|GO:0006355
Bhi04g02287 425 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 20 323 - -
Bhi04g02287 425 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 20 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02183 Bhi-Chr3:47468708 Bhi04g02287 Bhi-Chr4:62588823 4.46E-32 dispersed
Bhi04g02287 Bhi-Chr4:62588823 Bhi10g01210 Bhi-Chr10:26540543 1.86E-48 dispersed
Bhi04g02286 Bhi-Chr4:62588823 Bhi04g02287 Bhi-Chr4:62588823 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1056 PF00847 AP2 2.60E-14 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02287 - K09286 csv:101215431 632.098