Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02334 ATTGTTAGGCGTCTTCTTCCAAAAATTGGAGCCAAAACAGAAACCCTAGCATCCGCTTTGCTCGTTCGTCGTCTCTCTCGGCATCCATTTTTACGGAGCAAGGTTAAATCAAGCTTCAAGCAATGGCAACCACCGAGAACACTGTTTTGCAATTTTCACAGTCCTCTAACACTTTATCTGCCAAGGTTCATCCTCTGGTTATCTTCAACATTTGTGATTGCTATGTGAGGCGCCCCGACCAGGCCGATCGAGTGATTGGTACTCTTCTCGGCTCGGTTTTACCTGATGGAACCGTTGATATTCGCAACTCTTATGCTGTTCCTCATAACGAGTTCTCGGATCAGGTTGCGCTGGATATTGACTATCATCACAACATGTTAAGTTCCCATCAAAAAGTTAATCCAAAGGAAGTTATCGTTGGATGGTACTCAACTGGTACGGGAGTTACGGGTGGCAGTGCGTTGATACATGAATTTTATTCAAGAGAAGTTGCAAACCCTATTCACCTGACTGTTGATACTGGATTTAAAAATGGCGAAGGGACGATCAAAGCTTATATCTCTGTCAATTTGTCCCTGGGAGATAGACAGCTTGCTGCTCAGTTTCAAGAAATTCCTTTAGATCTTCGAATGGTTGAAGCTGAGAGACTTGGATTTGATATATTGAAGAGAACGTCTGTTGATAAACTGCCAAATGATTTGGAAGGAATGGAAGCTTCAATGGAGAGATTGCTTGCCTTAATTGACGATATTTACAAATATGTTGATAACGTTGTGGAAGGGCACGTTGAGGCAGACAACACGATAGGGAGATTTCTAGCTGACACTGTAGCCTCTCTTCCAAAACTGTCACCAGCTGCTTTTGATAAGCTGATGAATGACAACGTGCAGGACCATTTGCTGTTGCTGTATTTATCAAGTATAACCAGGACACAGCTGAGCTTGGCTGAAAAGTTGAATACGGCTGCTCAGATTCTGTAACTTCTTCAAACCTGCATCGACGATTTTGCATGTTATTTGTTTGGTGATTGACCAAAATCTAAGAATTCGGGTACTTAGTGTTCTTCTGCATAACGGCTCCCCCTTCTCTTCTACAAACCCCCATTTTGATTGAGTTTCACTGTCAGATTCTTCTTATACTACTGCCTGCTTTGTGGAATATGTTGTCTAGTTTAACAGACGAGGGTGTTGTAGTACCATTATTACCATCAACAAATATTTGTCCAGACGCCCAATTTTCCCCCATACTCAGTATTATGTTGCCACAAATCTTTCTTTCTCATCTCACTTTTAAGTATACTTCCGTCGTTTAAAGCCAACAATATGATTTACTTTCAA 1337 41.59 MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDILKRTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 64001669 64004892 + XM_039028182.1 Bhi04g02334 33943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02334 285 Gene3D Cytidine Deaminase, domain 2 7 187 - -
Bhi04g02334 285 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 17 284 - -
Bhi04g02334 285 SMART pad1_6 19 150 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bhi04g02334 285 CDD MPN_eIF3f 21 278 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bhi04g02334 285 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 18 121 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bhi04g02334 285 Hamap Eukaryotic translation initiation factor 3 subunit F [EIF3F]. 18 281 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bhi04g02334 285 ProSiteProfiles MPN domain profile. 20 151 IPR037518 -
Bhi04g02334 285 Pfam Maintenance of mitochondrial structure and function 172 278 IPR024969 -
Bhi04g02334 285 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F 17 284 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02334 Bhi-Chr4:64001669 Bhi09g01851 Bhi-Chr9:50865512 2.16E-11 dispersed
Bhi11g01869 Bhi-Chr11:53366043 Bhi04g02334 Bhi-Chr4:64001669 3.19E-34 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02334 K03249 - csv:101205957 555.829