Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02349 TTTTTTTGTACACAATTTGTGATGTAATTTTTGTCTCAAAAGATTTCTCTTTCCCTTCCAACAATGATTTGGGTGATCACGTTTTCTACTTTTTCTTTTGATTGAAAAAAATATATATGGAAAAGGAAAAAAAAGGAAAAAAAAAAAAAAAAAAGAAAAAAGAAGCTGAATGATGCTCTGCATTATGCAGTCCAAAAATTGTCTCCGAAATCTTTCGTCTTCTTCTTCCTCTCTCCAACTCTGTTTTCTGCTGCACATCGCCACTGACACCCAACAAAGCCGCTGAAACAGGGGACACCCACCACAAACTTACTTCTACTTCTCACTCCATTCCTCATTATCACACCCTAAATCAAACTTTTTTTCTTTGATGGCACTCCTTTCTCTCTGTTCCCATTCATGGTTTTGCCCTTATAGAGCCATTACATGAGGATTCTCTTTCTGGGTCTTTGCGATGACTACAATCCAAAACTCCCATGTCGGCACAATGGATGTAGAACAACAACAACAACAACAACAACAGCGGCCTCGCCGGGTTTCCGCCGCTGCTACTGACTCCTCACCGGCCTCCGATGATGTGCGGCGGTGCTCGGTCCAATCCAGGGCTGACATTATGGAGGAAGTGGCGGCGGAGAAAAGAAGGGGATCCTCTGTTTCGGAGTGCTCTGTAGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTTCCGGATTTGTCATTTGAGTTTGGATGCTTCTAATCATGAATCTGGAATCCCCATTGAGTTGGGTTGTTCTTGTAAGGATGATTTGGCTGCTGCTCATAAGCAGTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATCACATGTGAGATCTGTGGATCAATTGCACACAATGTCACTGGTACTTATGAACCCGATTCAACAGAGCAGCGCAATGAGTCAAATGAAGCAACAACAGCAACCACTACAGCTGCTGTCGTGATGCCACTGCACTCTACAGAGGCTCGGAACTTCTGGCAAGGCCACAGGTTCCTGAATTTCTTACTTGCCTGCATGGTTTTCGCCTTCGTAATATCATGGCTATTTCACTTCAAAATACCATCATAATCACGAAAAACTACACCTGAAAAGTAGCAGCAAAAGATAGTCGAAAAGCTTCGCCGTGCTCTCTTCATTCTGTAATGCTGCCATTGAAATGAACTCGAAAGATCGACTATATCGTACCATTACCGGCTCAGGATTGTGATTACCAATATTCTGTTAATATATATTAATGTTAGAGAACCTTGAAGGAAGAGTTTGGCCTTGTAACTTGTAAGATGTATAATGAAACTGTCTGTTAGTTTATATTGTATTATTGGGCTCAGCCTAGCTGGATTGGCCGTCTCAATTGTTTGTGCTGTTTGTCCCTTGCCGTTTCATTGTGGATAATTCTCTGTTGAGATTC 1460 42.4 MTTIQNSHVGTMDVEQQQQQQQQRPRRVSAAATDSSPASDDVRRCSVQSRADIMEEVAAEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDFRICHLSLDASNHESGIPIELGCSCKDDLAAAHKQCAEAWFKIKGDITCEICGSIAHNVTGTYEPDSTEQRNESNEATTATTTAAVVMPLHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 64503502 64506431 + XM_039028475.1 Bhi04g02349 33958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02349 221 PANTHER ZINC FINGER, RING-CH-TYPE 5 221 - -
Bhi04g02349 221 SUPERFAMILY RING/U-box 94 148 - -
Bhi04g02349 221 Pfam RING-variant domain 95 145 IPR011016 GO:0008270
Bhi04g02349 221 ProSiteProfiles Zinc finger RING-CH-type profile. 86 152 IPR011016 GO:0008270
Bhi04g02349 221 SMART ringv_2 95 146 IPR011016 GO:0008270
Bhi04g02349 221 MobiDBLite consensus disorder prediction 1 43 - -
Bhi04g02349 221 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 5 221 - -
Bhi04g02349 221 MobiDBLite consensus disorder prediction 1 44 - -
Bhi04g02349 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 154 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02749 Bhi-Chr3:70008524 Bhi04g02349 Bhi-Chr4:64503502 2.52E-10 dispersed
Bhi03g02750 Bhi-Chr3:70008525 Bhi04g02349 Bhi-Chr4:64503502 2.52E-10 dispersed
Bhi04g02349 Bhi-Chr4:64503502 Bhi08g00549 Bhi-Chr8:18737601 1.58E-51 dispersed
Bhi11g01900 Bhi-Chr11:54163095 Bhi04g02349 Bhi-Chr4:64503502 4.36E-72 wgd
Bhi03g02093 Bhi-Chr3:45200867 Bhi04g02349 Bhi-Chr4:64503502 1.97E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02349 - - csv:101207404 348.977