Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02379 TTCAATTCCAACCACAAATGACCGTTTATTTATATGCAAACCCATTTTCATTCCCTCAATTAGCTTGGAACTTGAACATTTCCCCACCCAAAAAACTTTTTGAAGTGGGGAATACTGCAAGATCTTTTAATGTTTCTTCACAATCTGTCACTCACTTCAGCTTCGAAATATGTACCCTTCTCTTTTTACCTCCTTCTCCTCTGTTCTGTTTCATCTTCTTCAATGGATTCTCTTAATTTCCTCCTCCAATTTCTTTCTAGTTTCCTCTTAATTTCCCCATTTTAATCCAAACCCACTTCTCCATTTGTCCGGATATGGCGAATTGGAGTGGAATTGGGAATCTTACAATCGCACAACTTGATCTTGAAAAAACAGAGCAAGAACATAAGAATGAAGATGGGGATGGAATTAAAGCCAAGCGGCGGCCACGAGGGCGGCCACCGGGTTCAAGAAACAAGCCGAAGCCGCCCATTGTCATTAACAAACACACTCCCAACGCTCTTCAAACCCACATTTTCGAAATCACCGCCGCCGCCGACATTACCCACTCCATTTCCACCTTCGTCCACCGCCATCACCGTGGGGTTTCCATTCTCAGCGCCACCGGCCTCGTCGCTGACGTCACTCTCCGTCAACCCCCCGGCGTCATTACCCTCCACGAACGCTTCGAGATCTTGTCTCTCTCTGGCTCTTTCCTTCCCACGCCCTCTCCCCACGGGGCTACTGGCTTGACAGTCTATCTCGCCGGCGGCCAAGGCCGGGTTGTCGGAGGCCTCGTCGCTGGTCCCCTCATCGCCGCCGGCCCTGTCATAGTAGTTGCAGCTTCGTTTACCAATGCTGTGTATGAAAAATTGGCGATTGAAGAAGATGAAGAGAATTCAAAGGAGGAGAAGCAATTGGAAGATAAAATTGATGGAAATAATTCAGTGGGAGAATCATCATCAGTAGCAGCAGCAGCAAGTTCTTTGGCAGTTTATAATTTGATTCCTAATACTCAAATTTCACAAGAAATGTTTTGGGCTCCTCTTTCTCGTCCTCCTCCATCTTATAATTAA 1055 46.45 MANWSGIGNLTIAQLDLEKTEQEHKNEDGDGIKAKRRPRGRPPGSRNKPKPPIVINKHTPNALQTHIFEITAAADITHSISTFVHRHHRGVSILSATGLVADVTLRQPPGVITLHERFEILSLSGSFLPTPSPHGATGLTVYLAGGQGRVVGGLVAGPLIAAGPVIVVAASFTNAVYEKLAIEEDEENSKEEKQLEDKIDGNNSVGESSSVAAAASSLAVYNLIPNTQISQEMFWAPLSRPPPSYN 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 65118437 65119491 + XM_039030059.1 Bhi04g02379 33988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02379 246 MobiDBLite consensus disorder prediction 184 207 - -
Bhi04g02379 246 Gene3D - 64 191 - -
Bhi04g02379 246 PIRSF ESCAROLA 9 240 IPR014476 GO:0003680
Bhi04g02379 246 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 245 - -
Bhi04g02379 246 SUPERFAMILY AF0104/ALDC/Ptd012-like 61 185 - -
Bhi04g02379 246 MobiDBLite consensus disorder prediction 18 56 - -
Bhi04g02379 246 CDD DUF296 64 172 IPR005175 -
Bhi04g02379 246 MobiDBLite consensus disorder prediction 184 200 - -
Bhi04g02379 246 ProSiteProfiles PPC domain profile profile. 60 196 IPR005175 -
Bhi04g02379 246 MobiDBLite consensus disorder prediction 18 37 - -
Bhi04g02379 246 Pfam Plants and Prokaryotes Conserved (PCC) domain 65 174 IPR005175 -
Bhi04g02379 246 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 245 IPR014476 GO:0003680
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02379 Bhi-Chr4:65118437 Bhi06g00976 Bhi-Chr6:26791656 2.26E-62 dispersed
Bhi09g02495 Bhi-Chr9:67484446 Bhi04g02379 Bhi-Chr4:65118437 3.81E-40 dispersed
Bhi04g02379 Bhi-Chr4:65118437 Bhi01g00104 Bhi-Chr1:2168956 5.58E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02379 - - cmo:103485519 335.88