Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02390 TTTGTTTTCCGTGGAACAAGAGTTCCAGACATAGAAAATGGTCTATCTGGATTTATACCTGAACGGCGTGCAATGGTACCATGTCACCTATGTACAGACAGATGTCTGTTTCATGTGATGATTTTGATCTATTGCATTGTTTTAACTCCTTGACTTTGTTCCAGTCCTTTTGTTATTCATGATATTAAATTCTCACCAGATGTCACCGAACTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTACGCAACTTGTCAACAACTTCAGGCTCAAGCCCAAGCAAGAGCTATGGCAGCCAGTGGCCTTCTTGGTCACACTGAATTGAGGTTACATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTAGATCGGGAATTCGATGATCTAGATTATGAAACTTTGAGAGCTTTGGATTCTGATAATGCTCCGACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCCGTTCATAAATACAAGGTTCCGGGTCCTCAAAGCGATCCCTCTGTAAATCAGCAAGCTTCATCTTCAGAATCTAACGAGAAGAGACAAGATTTAGTTAATGCAGTTGGCAGTACCAAGACCTCTGAGGATGAACTCACATGCAGCGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCATACGTAGTTTGCCATGTTTACATCAGTTCCATGCCAACTGCATAGATCCGTGGCTGCGACAGCAGGGAACATGCCCTGTTTGTAAATTTAGAGCGGTGTCCGGGTGGTCAGAACAGGGGCAAGGGGAAACTGATGCTTATATGGTTTAATTGGATATCGAACGATGCTTGACAACTCATTAAATAGCAGAGGACATGAACAGACGTGGTGTAATTAGGTTAAGGGTAGAGGCATTACAGGAATTGCAGTTGCCGCTCTGTATCTTTGAACTTCTGACGAGCCATTTAATTGTATTCTTGAAGTTGATCATTTGTGATAGAGTCTCTGATCATTGTGAGTGAGCAGAGTTTTGTTCTTTCACTGTCTTCAATGTACTATTCCAATCCTTGTTAGCAAAGTACTTGTTACCTCTAGAACTAAACACTACAAGGAAAATTTTCTACA 1151 41.88 MILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVPGPQSDPSVNQQASSSESNEKRQDLVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 65386886 65389445 + XM_039029447.1 Bhi04g02390 33999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02390 225 SUPERFAMILY RING/U-box 155 212 - -
Bhi04g02390 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 210 IPR013083 -
Bhi04g02390 225 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SDIR1 1 224 - -
Bhi04g02390 225 MobiDBLite consensus disorder prediction 127 154 - -
Bhi04g02390 225 PANTHER TARGET OF ERK KINASE MPK-1 1 224 - -
Bhi04g02390 225 MobiDBLite consensus disorder prediction 120 154 - -
Bhi04g02390 225 Pfam Ring finger domain 163 205 IPR001841 -
Bhi04g02390 225 SMART ring_2 164 204 IPR001841 -
Bhi04g02390 225 CDD RING-H2_PA-TM-RING 163 205 - -
Bhi04g02390 225 ProSiteProfiles Zinc finger RING-type profile. 164 205 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02388 Bhi-Chr4:65385550 Bhi04g02390 Bhi-Chr4:65386886 4.67E-170 dispersed
Bhi04g02390 Bhi-Chr4:65386886 Bhi05g01947 Bhi-Chr5:60389533 4.14E-13 dispersed
Bhi04g02389 Bhi-Chr4:65385550 Bhi04g02390 Bhi-Chr4:65386886 4.67E-170 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02390 K16283 - csv:101216306 403.675