Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02450 GAACTCTCATAAATATTATTATGGATAACAATTACCAAATATTCTTCCCAGATTATTCCTCATCCTCCCATAACTCACTGCCTATTACACCCATGGATCATCAGCTCGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTAGTTTGAAAAAAACAAATGGATGTATGAAATCGAAGACGAAGATAAGAAAAGAGAGATTTGCGTTTGAAACGAGAAGCCAGGTTGATGTGCTTGATGATGGCTACCGCTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACAACAAGTTTCCCAGGAGCTATTACAAGTGTTCACATGAAGGATGCAAAGTGAAGAAGCAAATTCAACGGCTTACAAACGACGAAGGAATGGTATTAACAACCTATGAAGGAGTTCATTCTCATCCCATTGAAAAGCCTCAAGATAACTTTCAACATATCTTGACCCACATGCAAATTTACTCTTCTTCTTTTTAAAACATTTATTCCTTTTTTATTTCTTTTCCTTTTCTTCACCTTACACTTCTCAATTCTTATTATTCCTTTGATATATATATATATATATAATGCTTTAGTATTTTAAACACTCAA 590 33.9 MDNNYQIFFPDYSSSSHNSLPITPMDHQLEEEEEEEEEESSLKKTNGCMKSKTKIRKERFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFPRSYYKCSHEGCKVKKQIQRLTNDEGMVLTTYEGVHSHPIEKPQDNFQHILTHMQIYSSSF 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 66727719 66729148 - XM_039030576.1 Bhi04g02450 34059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02450 151 SMART WRKY_cls 71 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi04g02450 151 Coils Coil 25 45 - -
Bhi04g02450 151 SUPERFAMILY WRKY DNA-binding domain 64 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi04g02450 151 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 28 147 IPR044810 GO:0003700
Bhi04g02450 151 MobiDBLite consensus disorder prediction 10 48 - -
Bhi04g02450 151 Pfam WRKY DNA -binding domain 72 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi04g02450 151 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 28 147 - -
Bhi04g02450 151 ProSiteProfiles WRKY domain profile. 66 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi04g02450 151 Gene3D WRKY domain 58 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02751 Bhi-Chr1:68177920 Bhi04g02450 Bhi-Chr4:66727719 8.06E-59 dispersed
Bhi04g02450 Bhi-Chr4:66727719 Bhi01g01100 Bhi-Chr1:20981951 7.72E-31 dispersed
Bhi04g02450 Bhi-Chr4:66727719 Bhi05g02037 Bhi-Chr5:62389375 3.15E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1064 PF03106 WRKY 5.70E-26 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02450 - - csv:101212622 216.083