Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g02508 CAGTGAATGAAAATCAATCTCATTTTGTTTTTCTTTTGTGCTAAGAAAATATCTTTCAGCAGTTGATCAAAGATTCAAGCCCCATATTCTCTCTCTCTCTCTTTGAACTTTGAATTTTCATTGTTAATCCAAGCTCCAAACAGTTTTCTCATGCTCATCAATGGCGGCCTTATGGAGAATTACATGAACTAATGGGTATTGAGGATTTTGTGCGAGAAGCTTCAAAGCTCCGAATCTATGGCGGAAATGGATGGTTCATTTGATCTTGTAGGAGAGTTGACGAAGCTGATTCGAATATGGGAAGGACGATCCAAATTTCATGGTTGAATAGAGCTGGGCCCGATATGAAAGGGCTCCACAGTGGGGAGTTTTAGATGTTCATTTTCAAAAAGGTTTGGCCATGGAAATCAACCTCGAGACTGCAGTAGATTCATGGCGGACCGCCGGAAATGGCTACGTCGCCGGAAAATTCCATTTTACTCGTATGATTGGTCAACAGAGTATGAGCTCTTCATCAACTCAAATCTATGCTTCAAGGATGGGCATCTATGAGCCATTTCACCAGATCAATTCATGGGCAAATTCATTTGGTAGCCGACTAGATACGAGCATATCGCCTGTTATAAAAGTGGATGACTCTGTAGACAATAAAACCGAGTTTGTTCCTTTTGAATCGATGGATCATCATGAGAGCAGTCAAGAAATGAACAAGCCAATCGACGATAAGGTACAAAGACGTTTAGCACAAAATCGAGAAGCAGCTCGTAAAAGCCGTATGAGGAAAAAGGTTTATGTGCAGCAGTTAGAAACTAGCCGTTTGAAGCTGGCACAGTTGGAGCAGGAGCTAGAAAGAACCAGGCAACAGAAGGGTACCAGCAGCTTAGTAGATACCAGCCATTTAGGATTCACCGGATTGGTAAACCCAGGGATTGCTGCATTCGAGATGGAATACAATCAGTGGGTTGAAGAGCAACAGAGACAGATCAACGAACTCAGAAAGGCATTGCAAGTTCATACAACTGATATAGAACTCCAAATTTTAGTGGAGAGCAGCTTAAACCATTACCACAATCTATTTTGCATGAAAGCCAGTGCTGCGAAGGCTGATGTTTTCTATTTAATGTCTGGTGTTTGGAGAACATCGGCAGAGCGTTTTTTCCTCTGGATAGGAGGATTTCGCCCATCAGAGCTGCTAAACGTTCTCAAGCCATACTTTGAGCCATTAAATGAACAACAAAGAGCCGATATCCACAAGTTGCAACAGTCGTCTCGGCAAGCCGAAGATGCGCTCACTCAGGGAATGGAAAAACTGCACCAGAATCTATCCCTCAGCATGGCCAGTGATCCTATAGGAAGCTATATTTCTCAGATGGGTGATGGAATGGAGAAACTAGAAGTATTGGAGAGCTTCGTAAGCCAGGCAGACCATCTCAGGCAACAAACTTTGAAGAGAATGTCTCACATCCTAACCACCAAACAGGCAGCACAAGGCTTGCTCGCTTTGGGCGAGTACTTCCACCGTCTCCGCATTCTCAGTTCGCTCTGGGCCACTCGACCTCGTGAACCTGCCTAGCCATTAAAAGCTCAGACATGTTCCAGTCACCATAATATTCAATACCATAAGGCATAGACTACAAGGAACGTATACTTCTGCCTCTCATGTAAAAAAGGGATGCAAATCCTGTTATAAGTTCCACTGCTAGCCACATTTTAGTAAGCAAGTTCTGGTTTTCAAAATGTAAATATCAATAGTTCTTATAATGCTGCAGCTGTAAGAAACTTAGTTGATTAACTTTATATAGTAAAATTATATTTTTGTAATA 1823 42.24 MEINLETAVDSWRTAGNGYVAGKFHFTRMIGQQSMSSSSTQIYASRMGIYEPFHQINSWANSFGSRLDTSISPVIKVDDSVDNKTEFVPFESMDHHESSQEMNKPIDDKVQRRLAQNREAARKSRMRKKVYVQQLETSRLKLAQLEQELERTRQQKGTSSLVDTSHLGFTGLVNPGIAAFEMEYNQWVEEQQRQINELRKALQVHTTDIELQILVESSLNHYHNLFCMKASAAKADVFYLMSGVWRTSAERFFLWIGGFRPSELLNVLKPYFEPLNEQQRADIHKLQQSSRQAEDALTQGMEKLHQNLSLSMASDPIGSYISQMGDGMEKLEVLESFVSQADHLRQQTLKRMSHILTTKQAAQGLLALGEYFHRLRILSSLWATRPREPA 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 67789684 67795011 + XM_039030013.1 Bhi04g02508 34117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g02508 390 Pfam bZIP transcription factor 108 148 IPR004827 GO:0003700|GO:0006355
Bhi04g02508 390 Gene3D - 108 162 - -
Bhi04g02508 390 SUPERFAMILY Leucine zipper domain 109 151 IPR046347 GO:0003700|GO:0006355
Bhi04g02508 390 Coils Coil 276 296 - -
Bhi04g02508 390 Pfam Seed dormancy control 194 269 IPR025422 GO:0006351|GO:0043565
Bhi04g02508 390 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 112 127 IPR004827 GO:0003700|GO:0006355
Bhi04g02508 390 Coils Coil 188 208 - -
Bhi04g02508 390 Coils Coil 128 155 - -
Bhi04g02508 390 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 107 151 IPR004827 GO:0003700|GO:0006355
Bhi04g02508 390 PANTHER TRANSCRIPTION FACTOR TGA7 35 389 - -
Bhi04g02508 390 ProSiteProfiles DOG1 domain profile. 177 385 IPR025422 GO:0006351|GO:0043565
Bhi04g02508 390 PANTHER TRANSCRIPTION FACTOR TGA9 35 389 - -
Bhi04g02508 390 SMART brlzneu 105 167 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02449 Bhi-Chr1:60375749 Bhi04g02508 Bhi-Chr4:67789684 7.81E-130 dispersed
Bhi04g02508 Bhi-Chr4:67789684 Bhi04g02510 Bhi-Chr4:67790669 0 dispersed
Bhi04g02508 Bhi-Chr4:67789684 Bhi04g02509 Bhi-Chr4:67789694 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1067 PF14144 DOG1 5.30E-29 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g02508 K14431 - csv:101217648 657.907