Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00003 CGCCTATAAAACAACAGAGCAAGGACCTGATTTCAGTTGCACCTTTCCGCTCGCTCATCTTCCCTGATTTCCCGTACTCCCATGCCGCCATTAAAGCCCTAGCCCATCGTCGCTGCCGGCCTCTCTTACGCCGATTTTCCAACCTCCGACGGCTTCATTTTAACTGTGCGATTCAATGGCGTAAGTTGGGAACCGGAAGATTTATTTCTTCAGAAACGCCTCAGTTTTGTTTCATCTCGAAGCGAACAGAGCAAGAAGATCTGTGTGCTGATTACGTTTACGAGAAATGGCACCGCTATTAAACGATCACTTCAGTTATCAAACGCCAGAAAATGAGACTGTTATCACTAAAAAAATTCCTCGGTCTGAACAAACCAACAAATATCCTAATTGGTATTCACCAGATACAGGAATTTGCCGTAGTGTTCATGCTTCTAGAGGAGTTCCCTCTGATCCATTTCTTGATGTTGTCTCCTTCATTTTCTCCTTCAAACACAATGGAAATTCAGCTATCATTGATTCCTCAACTGGGAGTTCAATATCTTACAAAGAAATGTTTCATATGGTCAAATCCATGGCTTCTGGACTCCAAAAATTCGGTATATCACAAGGGGATGTAGTTTTGCTTGTGTTACCAAATTCCATTTTCTATCCCATTATTCTTTTAGGTGTTCTGTATTTAGGAGCAGTTGTTACAACCATGTTTCCTCAAAGCAGTTCTTCAGAAATCAAGAAACGAATCAATGATTGCAATGTTCGATTGGCTTTTACAATAACTCAGAAAATCAAGAATTTTGAGTCATTGGGAATTCAGGCAATTGGGGTACCAGAAATTACCAATTTCGACTTGATGCAGCCTATGGGATTTTCTTATTTTCATGAGCTTATTTCAAGTGGTTCTGATTTGAAACAAAGACCAGTGATTAGACAAGAAGATACAGCTGCTCTATTGTTTTCTTCAGGTACTACTGGAGTAAGCAAAGGGGTTATGTTAACACATAGAAATTTTATATCTACGATCGAGCTTTTTGTTCGGTTTGAAGCTTCACAGTACGAATATTTGCCTACAGAGAATGTGTATTTGGCTGCTATACCAATGTTTCATATATATGGTCTTTCCATTTTTGTGATGGGATTACTGTCATTGGGATCTAGTGTTGTTATAATGAGCAAATTTGATGTGAAAGAGGTAGTCAAGGCTATTGACAGATTTAAAGTCACACATTTTCCAGTTGTTCCACCTATAATGACAGCTATGGCTAGAACTGCAGAGAAAATTGGTGTGCATAGATTTAGAAGTTTGAAACAAGTTTCTTGTGGAGCTGCTTCTTTGAACAAGAAGACCATTGATGATTTTGTTAAGGCTTTCCCTCATGTTGACTTCATTCAGGGATATGGCATGACTGAGTCCACAGCTATAGGAACTCGCGGCTTCAATACCAAAAATGCTAGAAATTATACGTCAGTTGGACTTTTAGCTCCAAACACAGAAGCTAAAGTAGTTGATTGGGTTTCCGGATCTTTCATGCCTCCTGGTAAAACCGGCGAACTTTTGTTACGCGGACCCGGTTCAATGAAAGGGTACTTGAATAATCCAGAGGCAACAATGTCCACAATAGATAAAGAAAATTGGCTACATACTGGAGACATTGTCTACTTTGACCGAGATGGATACTTGTATGTTATTGATCGTTTGAAGGAGGTTATAAAGTATAAAGGCTTTCAGATTGCTCCTACTGATTTAGAAGCTGTGGTGATGACACATCCAGAAGTTCTCGATACTGCGGTAACAGCGGCCAAAGATGAAGAATGTGGGGAAATTCCAGTGGCATTTGTGGTAAAGAAGCCAGGAAGCAAACTCTCACAGAAAGATGTTATTGATTATGTTGCTCAACAGGTTGCACCATATAAAAAAGTAAGAAAAGTGGTTTTTACAGAATCAATACCAAAATCTGCTGCTGGCAAAGTACTTCGTAGAGAACTTGGGAAGCACTTGCCTTCTAAACTGTGAGGTCTCCCATTGTGTTTATCTTTCGTCTTTTCCTTATATTGGCTCTACCACCTAAAAATTTGTAATAACAGTATTCTATGACGATTCCTTATCGCAATCCCTATGGTTGAAAAGTTAATTCTTTGAA 2138 39.34 MAPLLNDHFSYQTPENETVITKKIPRSEQTNKYPNWYSPDTGICRSVHASRGVPSDPFLDVVSFIFSFKHNGNSAIIDSSTGSSISYKEMFHMVKSMASGLQKFGISQGDVVLLVLPNSIFYPIILLGVLYLGAVVTTMFPQSSSSEIKKRINDCNVRLAFTITQKIKNFESLGIQAIGVPEITNFDLMQPMGFSYFHELISSGSDLKQRPVIRQEDTAALLFSSGTTGVSKGVMLTHRNFISTIELFVRFEASQYEYLPTENVYLAAIPMFHIYGLSIFVMGLLSLGSSVVIMSKFDVKEVVKAIDRFKVTHFPVVPPIMTAMARTAEKIGVHRFRSLKQVSCGAASLNKKTIDDFVKAFPHVDFIQGYGMTESTAIGTRGFNTKNARNYTSVGLLAPNTEAKVVDWVSGSFMPPGKTGELLLRGPGSMKGYLNNPEATMSTIDKENWLHTGDIVYFDRDGYLYVIDRLKEVIKYKGFQIAPTDLEAVVMTHPEVLDTAVTAAKDEECGEIPVAFVVKKPGSKLSQKDVIDYVAQQVAPYKKVRKVVFTESIPKSAAGKVLRRELGKHLPSKL 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 143396 157297 - XM_039032796.1 Bhi05g00003 34213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00003 574 CDD 4CL 53 566 - -
Bhi05g00003 574 Gene3D - 472 571 IPR045851 -
Bhi05g00003 574 Pfam AMP-binding enzyme 70 476 IPR000873 -
Bhi05g00003 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 572 - -
Bhi05g00003 574 ProSitePatterns Putative AMP-binding domain signature. 221 232 IPR020845 -
Bhi05g00003 574 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 28 572 - -
Bhi05g00003 574 SUPERFAMILY Acetyl-CoA synthetase-like 69 570 - -
Bhi05g00003 574 Pfam AMP-binding enzyme C-terminal domain 486 560 IPR025110 -
Bhi05g00003 574 Gene3D - 56 471 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00163 Bhi-Chr3:4031467 Bhi05g00003 Bhi-Chr5:143396 1.39E-24 dispersed
Bhi05g00003 Bhi-Chr5:143396 Bhi09g02929 Bhi-Chr9:76403948 5.00E-164 dispersed
Bhi05g00003 Bhi-Chr5:143396 Bhi11g01437 Bhi-Chr11:41810957 2.31E-117 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00003 K01904 - csv:101219578 1004.59