Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00012 TTAGTGCTTCCTTCTTATTCGTCGCCGACCTTCGCTCCATTTGCTTCCCTTCTCCCCCGCCATTGATGATTCCTTGCACGGTCATTGTTTCTGATTGAAAATCGAGTGAATTTTTTTATTGAATTTCTCTTCTTCAGCCATTTCATTCGATGTACATCTTTGAATTTGAAGTGTAGTTGGTTGGATTAATGCAAGTATTTTGTGTTTCGGAAGAGGATCGATGAGTATAATCAGTAATCAAAGCCTCGAGGTCATTGATGTTTAAAGAGCGATTGCATTGGACATTCCTGTGTTTGGAAGTAGATCGAGGTTCCGATTGAAGTCAAGGTGTGTCTCTGTGTTAAATTCGTCGGCTCTGTCTAAACATCCTTGCAATTGAAGTGTGATTGGATTGAATGCATCTCTGTTGGGAAGAAGAACGAGGATTATTAAACAGAGGTGAGTAGGGAGAGACTGAAATTGGAGGAGGAAGAAGAAAAAGGGTGAAGTTTCGATGAGTGGAATTTTCGATCCGGTAGAAAATGGAGCAGAAGTACCCGTATGATAATGGAGTGATGATGACGAGAGACCCGAAACCAAGGCTGAGATGGACTGCTGATCTTCACGACCGTTTTGTAGACGCGGTCACCAAGCTTGGTGGGCCGGAAAAAGCAACTCCCAAGTCTGTGTTAAGATTGATGGGTTTAAAGGGCTTGACTTTGTACCACTTGAAGAGTCATTTGCAGAAGTATAGACTTGGACTGCAAACACGAAAGCAAAATATGGCTGAGCAAAGGAATGAAAGTAGCGGGTCTCTTAGCAATTTCAGCGGAGTAGAGGAAGATGACAGAGGGATGCAAATTGCTGAGGCTCTAAAATCACATGTCGAAGTGCAGAAAACAATACTAGAACAACTCGAGGTACAAAATAAACTTCAAATGAGAATAGAGGCTCAAGGAAAATACCTGCAAGATATCTTAGAGAAAGCACAAAAGAGTCTGGCACTTGCCATTAACGGTAACCTTGGTAGTCTTGAAGGCACAGGAATGCAGTTAATAAACTTTGATGCGGTTCTGTCAGATCAAATTGAAAAATTTAAGAAACAAGAAATGAGAGGAAGCATAGCAAACGTAATTGATGGTAGTAAGAAGAACGGTGATTCACTCATCCAGATATGCAAAGTGGAGGCTGGAGAAGAAGACATAAACGAGTTTAGTGTTGAAAAGAATATGATCAACTTTGATTTGAACTCCAAAGGTGGCTATGATTACAGTGCGAATGCGGCTGAAGTACTTGACGCCAAAGTGCTTCCTTGTTCAAGGTAA 1304 41.41 MEQKYPYDNGVMMTRDPKPRLRWTADLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGLQTRKQNMAEQRNESSGSLSNFSGVEEDDRGMQIAEALKSHVEVQKTILEQLEVQNKLQMRIEAQGKYLQDILEKAQKSLALAINGNLGSLEGTGMQLINFDAVLSDQIEKFKKQEMRGSIANVIDGSKKNGDSLIQICKVEAGEEDINEFSVEKNMINFDLNSKGGYDYSANAAEVLDAKVLPCSR 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 339953 343350 + XM_039031357.1 Bhi05g00012 34222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00012 260 Gene3D - 17 74 - -
Bhi05g00012 260 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 18 72 IPR006447 GO:0003677
Bhi05g00012 260 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Bhi05g00012 260 MobiDBLite consensus disorder prediction 79 98 - -
Bhi05g00012 260 Pfam MYB-CC type transfactor, LHEQLE motif 105 152 IPR025756 -
Bhi05g00012 260 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 246 IPR044848 GO:0003700
Bhi05g00012 260 SUPERFAMILY Homeodomain-like 18 75 IPR009057 -
Bhi05g00012 260 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 246 - -
Bhi05g00012 260 MobiDBLite consensus disorder prediction 79 96 - -
Bhi05g00012 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00012 Bhi-Chr5:339953 Bhi05g00014 Bhi-Chr5:340462 1.97E-151 dispersed
Bhi05g00012 Bhi-Chr5:339953 Bhi05g00013 Bhi-Chr5:339955 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1075 PF00249 Myb_DNA-binding 2.70E-07 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00012 - - csv:101219098 460.685