Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi05g00013 | AGTGCTTCCTTCTTATTCGTCGCCGACCTTCGCTCCATTTGCTTCCCTTCTCCCCCGCCATTGATGATTCCTTGCACGGTCATTGTTTCTGATTGAAAATCGAGTGAATTTTTTTATTGAATTTCTCTTCTTCAGCCATTTCATTCGATGTACATCTTTGAATTTGAAGTGTAGTTGGTTGGATTAATGCAAGTATTTTGTGTTTCGGAAGAGGATCGATGAGTATAATCAGTAATCAAAGCCTCGAGGTCATTGATGTTTAAAGAGCGATTGCATTGGACATTCCTGTGTTTGGAAGTAGATCGAGGTTCCGATTGAAGTCAAGGTGTGTCTCTGTGTTAAATTCGTCGGCTCTGTCTAAACATCCTTGCAATTGAAGTGTGATTGGATTGAATGCATCTCTGTTGGGAAGAAGAACGAGGATTATTAAACAGAGGTGAGTAGGGAGAGACTGAAATTGGAGGAGGAAGAAGAAAAAGGGTGAAGTTTCGATGAGTGGAATTTTCGATCCGGTAGAAAATGGAGCAGAAGTACCCGTATGATAATGGAGTGATGATGACGAGAGACCCGAAACCAAGGCTGAGATGGACTGCTGATCTTCACGACCGTTTTGTAGACGCGGTCACCAAGCTTGGTGGGCCGGAAAAAGCAACTCCCAAGTCTGTGTTAAGATTGATGGGTTTAAAGGGCTTGACTTTGTACCACTTGAAGAGTCATTTGCAGAAGTATAGACTTGGACTGCAAACACGAAAGCAAAATATGGCTGAGCAAAGGAATGAAAGTAGCGGGTCTCTTAGCAATTTCAGCGGAGTAGAGGAAGATGACAGAGGGATGCAAATTGCTGAGGCTCTAAAATCACATGTCGAAGTGCAGAAAACAATACTAGAACAACTCGAGGTACAAAATAAACTTCAAATGAGAATAGAGGCTCAAGGAAAATACCTGCAAGATATCTTAGAGAAAGCACAAAAGAGTCTGGCACTTGCCATTAACGGTAACCTTGGTAGTCTTGAAGGCACAGGAATGCAGTTAATAAACTTTGATGCGGTTCTGTCAGATCAAATTGAAAAATTTAAGAAACAAGAAATGAGAGGAAGCATAGCAAACGTAATTGATGGTAGTAAGAAGAACGGTGATTCACTCATCCAGATATGCAAAGTGGAGGCTGGAGAAGAAGACATAAACGAGTTTAGTGTTGAAAAGAATATGATCAACTTTGATTTGAACTCCAAAGGTGGCTATGATTACAGTGCGAATGCGGCTGAAGTACTTGACGCCAAAGTGCTTCCTTGTTCAAGGTAATCATCCATGGGCGAGTGCAGTTCATTTCTAGATAAAGCTTTTACCTTCACCTATTTCAAAGTTTGTCAAGCAACCATTGAAGAATATGTAGTAAAAATGTACCACTCCAGCCTGCTGTGCCAAGTCCCCATTTGCATTTGCCAATTGCCTTTATTCATATGAATGAAGAATTTCAGAAGGTTGAAATACCAATATAATTACTATTCTTGGCCACCACTAATGTATGGTATGCTAATTTTCACCTTGTTTTTTGCCCCTTATTTTTCTCTGGTTGTAAAATAGACAAGTTTGGTTTGGTAATGTTCTTGTTTTTCTTTCTTCATTATTTATTGAAGTCTTTATATTTGTATAAAAATTCTTTTTCAAGGCTGTCTTTGAAGTTCTCTTACCTGATAT | 1698 | 39.58 | MEQKYPYDNGVMMTRDPKPRLRWTADLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGLQTRKQNMAEQRNESSGSLSNFSGVEEDDRGMQIAEALKSHVEVQKTILEQLEVQNKLQMRIEAQGKYLQDILEKAQKSLALAINGNLGSLEGTGMQLINFDAVLSDQIEKFKKQEMRGSIANVIDGSKKNGDSLIQICKVEAGEEDINEFSVEKNMINFDLNSKGGYDYSANAAEVLDAKVLPCSR | 260 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 339955 | 344911 | + | XM_039031356.1 | Bhi05g00013 | 34223 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi05g00013 | 260 | Gene3D | - | 17 | 74 | - | - | |
Bhi05g00013 | 260 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 18 | 72 | IPR006447 | GO:0003677 | |
Bhi05g00013 | 260 | Pfam | Myb-like DNA-binding domain | 21 | 71 | IPR001005 | - | |
Bhi05g00013 | 260 | MobiDBLite | consensus disorder prediction | 79 | 98 | - | - | |
Bhi05g00013 | 260 | Pfam | MYB-CC type transfactor, LHEQLE motif | 105 | 152 | IPR025756 | - | |
Bhi05g00013 | 260 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 8 | 246 | IPR044848 | GO:0003700 | |
Bhi05g00013 | 260 | SUPERFAMILY | Homeodomain-like | 18 | 75 | IPR009057 | - | |
Bhi05g00013 | 260 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 8 | 246 | - | - | |
Bhi05g00013 | 260 | MobiDBLite | consensus disorder prediction | 79 | 96 | - | - | |
Bhi05g00013 | 260 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 15 | 75 | IPR017930 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi05g00013 | Bhi-Chr5:339955 | Bhi01g00235 | Bhi-Chr1:4370350 | 1.24E-55 | dispersed | |
Bhi05g00012 | Bhi-Chr5:339953 | Bhi05g00013 | Bhi-Chr5:339955 | 0 | tandem | |
Bhi05g00013 | Bhi-Chr5:339955 | Bhi05g00014 | Bhi-Chr5:340462 | 1.97E-151 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
1076 | PF00249 | Myb_DNA-binding | 2.70E-07 | CL0123 | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi05g00013 | - | - | csv:101219098 | 460.685 |