Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00026 CGGCGTGGGGTCCTCTCTACTTTCAAATTCTCAAAATTCCCCTATTCTCCCTCTTCAATCTCCGTTTTCCACCGCTCGCTCTCTCTTTACGCCCAGGTTTCACTCTCATTTCTCTCTAATTTCCTCTATTTTCTACTTCCGTTCTTCGATTTTCATTCCATTTTTGCGTTTCTTTCCACATAGCTATGTTCTCTGCTGCTTAATTTCCCTTCCCATTCATACCTATGTCCCTTCATAAACTGAAAATGATGTTATAGTTCGCCTCTTCTTGCAATGCTGTGTGGTTTCTTTCTTGTTTTGAAATTGAGAATCGAAGAGCATGTCATCTAGCTCCATCGAGTATGCAATCTGTATGTAGGATTAGATTCATACACTTTTTGAAGAAGAATCAAGAATTCGACTGAGGAATTGAAGAAAATTGTCTAATGGTTGATGATTTCGTGTGAAATTGGGAAAAAGTTTGATTCCGATTTCAGTTTCTCCTCTTGCAGCCTTTAGCTCTGTGGTGTGTGCTCACATGTAAATTCATTTCATCAAAATGTCCCTCCTTAGTAGATTCTTTTACCGAAGACCCCCAGATGGGTTGCTGGAATTTGTCGAACGAGTATATATTTTTGATTCGTGTTTTTCAACTGAAGTATTGCCTGATGGTATGTACCAAATATATCTGCATGAAATCATAAACGAATTACATGAAGAATTCCCGGATTCTTCCTTTCTTGCATTTAATTTTCGTGAAGGGGAGAAAAGGAGCCAATTTGCAGAAATGTTGTGCGAGTATGATGTCACTGTGATGGATTATCCTCGACAATATGAAGGTTGCCCTCTTCTTCCACTGTCGTTGATACAGCATTTTCTCCGCATTTGTGAAAGTTGGCTTCTGCTTGGTAACCAACAAAATGTCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCTCTCTTAGCATTCCTTTTGGCTAGCTTTTTGATATTTAGAAAAATGCACAGTGGTGAGAGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCAAAAGGGTTTTTGCAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAATATGTTGCAAGGAGAAATATAGTCTCGGAGTGGCCACCACCTGAGCGAGCACTCTCTTTAGATTGTGTAATTCTTCGTGGCATTCCAGCTTTTGATTCTCAGAATGGCTGCAGACCAGTCATTCGTATTTTTGGGAGGAATCTTTCTAGTAAGGGCGGGCTTTCCACGCAGATGCTTTTCTCCATGCCCAAGAAGAACAAGGCCCTCCGTCACTACCATCAGGCAGACTGTGATGTGATTAAAATAGACGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAGTCGGAACCAGAAAGAGAAGTTATGATGTTTCGTATTATGTTCAATACAGCATTTATTCGATCAAACATACTGATGCTAACCTCTGAAAATTTGGACATTCTTTGGGATTCAAAGGAGCGTTATCCAAAAGGCTTTCGAGCTGAGGTTTTGTTTGGGGAGATGGAAAGCATTTCCCCTCCAAGGGCTCCAACCTCCATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCTTTTTCCAGGGTTCAAGAACTTTTTAGTGGTGTCGAGTGGATTGATAGCAATGATGATGCTGCCTTGTGGGTACTTAAGAATCTTTCTGCCTTGAGTGACGTGAAAGAATTGTCAAGATTGCAAAATAAAACAAGTTCATACTCCTCACCAGTGGATTCTGAAGAGGAAAATAATACATCTAGCACTGCCGATAGTTCAGATGAAGTGTTTGATATTATTACAAAGCCTTTTGTTGATTCAACTTCTACCAACTTTACAATTCCGGCCATGGTACATTCTTCTGAATTATTGTCTGACAAGATTGGTGCTAAAGAAGTGAATATTTCATTAGAGTCTCCTCAATCTTCTGATGAATTTCAAGACAAGATATTTTCAAACAAAGAACCTCTACCCTCTTCATCACCTCCACTAACTTCTTTTGGCTCCCCACCCCTTCCTATTAGTTCTTCAATGTCATCACCACTGTTGCCTCCGTCTAATCTACCATATACCAATTCTAGTGGAGAACATGTCTCAAATAAAATGACACCCACTGTTAAAGTGATTCCTTCACCGCCGCCACCTCCACCTTTTTCTCTATCGCATAATGAGCCTCATGTAGAAACTTCCTGTAGTTCAGATTCGACCACTGTAACAATGCATGGGAGACCCCCTCCACCCCCTACACCTCCGCCTCAATATCCTACTAGCAACAATCCTGTTACAGCCTCGACTTATTCACTTTCGCATGTTCCTAAATCTTCTGGTGCTCCTCCACCCCCCCCACCACCTCCTCCTTTTGTTCCAAAATCTTCTAGTGCTCCTCCGCCTCCGCCTCCACCTCCACCTCCACCTCCAATTCCAAAACCTTCTGGTGCTCCCCCACCTCCACCTCCGCCTCCACCTGTAGTTGCAAAATCTTCTAGTGTTCCTTCCCCTCCACCTCCGCCTCCACCTCCAGTTTCAAAATCTTTTAGTGCACCTCCACCTCCACTTCTAAAATCATCTAGTGCTCCTCCGCCTCCACCTCCCCCTCCGCCTCTAAAATCTTCTAGTGCTCCTCCACCTCCACCTCCACCTCCTGTTCCAAAACTTTTTGGTGCTCCTCCACCTCCACCTCCTCTTCCACAATCAAATCGCGGTGCACCAGTTCCACCTCCTCCACCACCAAAACCTCCCAGTGTTGAGCTGCCAAGTCATGGTGCTAAATCAACTAGACCTCCTCCACCTCCTCCACCAGCAAAGCCGTTCAATGCTCATCCTCCGACAAGTCATGGTCCTACACCAGTGCCACCCCCTCCCCCAGGATCAAGAGGATCAAATGTACCGCCACCACCTCCTCCTGCTGGAAGAGGCAAAGCTTCCCTAGGATCAACAACTCAAGGAAGAGGCCGAGTAGCTACAGGAGTTGTAAATGCTCCAAAAAAAACCACTTTAAAACCATTACACTGGGTAAAAGTTACTCGAGCGATGCAAGGAAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCAAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCTGATGGAAGTGGCAGTAAAGGTGGAGGACGACGTGGTTCCAGCATCAACAAACCTGAAAAAGTGCAACTGATTGACCTGCGGAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAAAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGAGTTACACAGGTGACAGAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGCTAATGAAGGTCCCACGAATAGAGTCCAAATTACGAGTATTTGCTTTCAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATATCATTTGAACACAATAAATGATGCTACAAGAGAGGTCAAAGAATCTGCTAAGTTGCGTCAGATAATGCAAACAATTCTTACATTGGGAAATGCGTTAAACCAGGGTACCGCTCGAGGCTCTGCTATAGGTTTTAAGTTGGACAGCCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCATTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAGGACCTTGTCCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTAGCTGAGGAAATGCAAGCAGTGAGTAAAGGTCTTGAAAAGGTGGAGCAAGAGCTAACTGCTTCAGAAAACGACGGTGCTATCTCCGTTGGTTTCCAGAAGGTGCTGAAGAATTTTCTTGATACGGCTGAAGCTGAAGTAAGGGCACTTATCTCCTTATATTCTGAAGTGGGGAGAAACGCAGATTCACTATCCCAGTACTTTGGCGAGGATCCAGCTCGATGCCCCTTTGAGCAAGTGACTCAAATTTTGATAGTCTTTGTTAAGATGTTTAAGAAGTCACGAGAAGAAAATGAAAGGCAGGCTGATGCTGAAAAGAAAAAAATAGAGAAAGAAGCCATGAAAGAACGAAGTTCAGTTAAAGCAAAGTGAAACCATATTATGTTTTTGGTAGAAGGCATTGCCAGATCAGCCTCATTGATAAATTCGGTTGAACAGCTGAAGAGGTTTGAATGTGAACATGAGATTTATTATTCATGGACTTCCATCAAGCTGAACATGAGGCAATTTTGTTCCCAGGTTGGCTCTTCGCCTTCCTGTGTTGCCATTTCTTTCATCAATATCATGCCTTGTAAATACAACGTGACGCAATTATGGACTCGGGGAGTGGTTGCCATTTGACAACAGAAGTTGGAGTTACTGTTGATCTTAACTTGACATTGTCATTATGGTAACAAAACTTCTCACACAGTAACATCTAGATATATTAGTTGTGTAGATGGTTAAGATATATCCTTTGTACAGGTAAATATCATTGCTAGATTCCATACTGTTGATATTGGACCATATTTTGGTAGTTTAATTGACTCAGGGTGGCTTTTGCTGCTCATTTATTGTAAAGAAATGGTTAGAATTTCTAGTTAAAATGATGTATCATTAGTTCATGTCGAAAAGTTCCTTTACATATT 4773 42.22 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHEIINELHEEFPDSSFLAFNFREGEKRSQFAEMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLRICESWLLLGNQQNVILLHCERGGWPLLAFLLASFLIFRKMHSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGIPAFDSQNGCRPVIRIFGRNLSSKGGLSTQMLFSMPKKNKALRHYHQADCDVIKIDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEMESISPPRAPTSILNGEEKGGLPIEAFSRVQELFSGVEWIDSNDDAALWVLKNLSALSDVKELSRLQNKTSSYSSPVDSEEENNTSSTADSSDEVFDIITKPFVDSTSTNFTIPAMVHSSELLSDKIGAKEVNISLESPQSSDEFQDKIFSNKEPLPSSSPPLTSFGSPPLPISSSMSSPLLPPSNLPYTNSSGEHVSNKMTPTVKVIPSPPPPPPFSLSHNEPHVETSCSSDSTTVTMHGRPPPPPTPPPQYPTSNNPVTASTYSLSHVPKSSGAPPPPPPPPPFVPKSSSAPPPPPPPPPPPPIPKPSGAPPPPPPPPPVVAKSSSVPSPPPPPPPPVSKSFSAPPPPLLKSSSAPPPPPPPPPLKSSSAPPPPPPPPVPKLFGAPPPPPPLPQSNRGAPVPPPPPPKPPSVELPSHGAKSTRPPPPPPPAKPFNAHPPTSHGPTPVPPPPPGSRGSNVPPPPPPAGRGKASLGSTTQGRGRVATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSSINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKSYTGDREMLGKCEQFFLELMKVPRIESKLRVFAFKITFSSQVNDLRYHLNTINDATREVKESAKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLIAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISVGFQKVLKNFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADAEKKKIEKEAMKERSSVKAK 1232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 646137 657822 + XM_039031672.1 Bhi05g00026 34236

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00026 1232 Gene3D Formin, FH2 domain 828 1212 IPR042201 -
Bhi05g00026 1232 MobiDBLite consensus disorder prediction 507 543 - -
Bhi05g00026 1232 SUPERFAMILY Formin homology 2 domain (FH2 domain) 839 1220 - -
Bhi05g00026 1232 MobiDBLite consensus disorder prediction 1203 1232 - -
Bhi05g00026 1232 Coils Coil 1201 1224 - -
Bhi05g00026 1232 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 187 IPR029021 -
Bhi05g00026 1232 PANTHER FORMIN-J 1 1228 - -
Bhi05g00026 1232 ProSiteProfiles Formin homology-2 (FH2) domain profile. 826 1226 IPR015425 -
Bhi05g00026 1232 MobiDBLite consensus disorder prediction 489 831 - -
Bhi05g00026 1232 MobiDBLite consensus disorder prediction 406 429 - -
Bhi05g00026 1232 MobiDBLite consensus disorder prediction 544 558 - -
Bhi05g00026 1232 MobiDBLite consensus disorder prediction 578 594 - -
Bhi05g00026 1232 MobiDBLite consensus disorder prediction 611 753 - -
Bhi05g00026 1232 MobiDBLite consensus disorder prediction 595 609 - -
Bhi05g00026 1232 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Bhi05g00026 1232 Gene3D - 197 342 - -
Bhi05g00026 1232 MobiDBLite consensus disorder prediction 760 808 - -
Bhi05g00026 1232 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Bhi05g00026 1232 SMART it6_source 491 1232 IPR015425 -
Bhi05g00026 1232 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Bhi05g00026 1232 Pfam Formin Homology 2 Domain 831 1201 IPR015425 -
Bhi05g00026 1232 MobiDBLite consensus disorder prediction 880 899 - -
Bhi05g00026 1232 SMART PTEN_C2_2 198 338 IPR014020 -
Bhi05g00026 1232 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Bhi05g00026 1232 MobiDBLite consensus disorder prediction 560 577 - -
Bhi05g00026 1232 Coils Coil 1107 1134 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00026 - - - csv:101217517 1043.88
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00881 Bhi-Chr2:18686235 Bhi05g00026 Bhi-Chr5:646137 2.38E-146 dispersed
Bhi05g00026 Bhi-Chr5:646137 Bhi09g03005 Bhi-Chr9:77909228 2.51E-166 dispersed
Bhi05g00026 Bhi-Chr5:646137 Bhi05g00035 Bhi-Chr5:788966 1.96E-27 proximal
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi05g00035 . 667 1108 FH2 protein (formin) Gene Family AT3G25500 76.5 1.7e-186 651.0
Bhi10g01813 . 434 889 FH2 protein (formin) Gene Family AT3G25500 60.3 8.3e-141 499.2
Bhi02g02104 . 498 895 FH2 protein (formin) Gene Family AT3G25500 51.7 1.1e-103 375.9
Bhi05g00035 . 671 1122 FH2 protein (formin) Gene Family AT2G43800 61.0 1.4e-141 501.5
Bhi10g01813 . 467 906 FH2 protein (formin) Gene Family AT2G43800 54.5 2.7e-124 444.1
Bhi10g01479 . 250 588 FH2 protein (formin) Gene Family AT4G15200 51.0 1.1e-52 205.3
Bhi09g01953 . 445 591 FH2 protein (formin) Gene Family AT4G15200 65.5 5.3e-47 186.4
Bhi09g01952 . 445 594 FH2 protein (formin) Gene Family AT4G15200 64.2 2.2e-45 181.0
Bhi09g01953 . 446 882 FH2 protein (formin) Gene Family AT5G54650 68.9 4.0e-168 589.7
Bhi09g01952 . 446 885 FH2 protein (formin) Gene Family AT5G54650 68.5 1.7e-166 584.3
Bhi10g01479 . 442 906 FH2 protein (formin) Gene Family AT5G54650 63.0 5.2e-160 562.8
Bhi05g00035 . 682 1083 FH2 protein (formin) Gene Family AT5G54650 50.8 1.5e-103 375.2
Bhi10g01813 . 35 909 FH2 protein (formin) Gene Family AT5G67470 57.0 3.2e-226 782.7
Bhi05g00035 . 663 1125 FH2 protein (formin) Gene Family AT5G67470 58.9 1.5e-135 481.5
Bhi02g02104 . 498 897 FH2 protein (formin) Gene Family AT5G67470 50.9 3.1e-104 377.5
Bhi07g01666 . 349 837 FH2 protein (formin) Gene Family AT1G59910 51.1 1.8e-123 441.4
Bhi05g00035 . 703 1084 FH2 protein (formin) Gene Family AT5G48360 52.6 1.4e-100 365.2
Bhi10g01813 . 491 866 FH2 protein (formin) Gene Family AT5G48360 50.5 1.1e-89 328.9
Bhi10g01813 . 471 865 FH2 protein (formin) Gene Family AT3G05470 51.6 1.2e-105 382.1
Bhi09g01953 . 451 865 FH2 protein (formin) Gene Family AT3G05470 50.1 4.7e-105 380.2
Bhi05g00026 . 912 1223 FH2 protein (formin) Gene Family AT1G42980 51.1 4.1e-69 259.2
Bhi05g00026 . 1 1230 FH2 protein (formin) Gene Family AT1G31810 65.9 0.0e+00 1254.2
Bhi02g00293 CCT 1272 1593 FH2 protein (formin) Gene Family AT5G07650 74.8 9.3e-129 458.8
Bhi08g01136 CCT 990 1300 FH2 protein (formin) Gene Family AT5G07650 69.5 4.8e-117 419.9
Bhi09g03005 . 1090 1412 FH2 protein (formin) Gene Family AT5G07650 64.4 6.3e-109 392.9
Bhi02g00881 . 959 1278 FH2 protein (formin) Gene Family AT5G07650 62.3 2.4e-108 391.0
Bhi02g00882 . 712 1031 FH2 protein (formin) Gene Family AT5G07650 62.3 2.4e-108 391.0
Bhi05g00026 . 896 1227 FH2 protein (formin) Gene Family AT5G07650 59.6 9.1e-108 389.0
Bhi02g00293 CCT 1199 1586 FH2 protein (formin) Gene Family AT5G07770 69.7 2.7e-141 500.0
Bhi08g01136 CCT 913 1300 FH2 protein (formin) Gene Family AT5G07770 62.7 8.5e-127 451.8
Bhi09g03005 . 1013 1404 FH2 protein (formin) Gene Family AT5G07770 59.0 1.4e-118 424.5
Bhi05g00026 . 832 1221 FH2 protein (formin) Gene Family AT5G07770 55.8 8.8e-116 415.2
Bhi02g00881 . 882 1270 FH2 protein (formin) Gene Family AT5G07770 57.1 7.4e-115 412.1
Bhi02g00882 . 635 1023 FH2 protein (formin) Gene Family AT5G07770 57.1 7.4e-115 412.1
Bhi09g03005 . 1006 1412 FH2 protein (formin) Gene Family AT3G32400 76.4 6.8e-170 594.7
Bhi02g00881 . 889 1279 FH2 protein (formin) Gene Family AT3G32400 68.9 3.6e-147 519.2
Bhi02g00882 . 642 1032 FH2 protein (formin) Gene Family AT3G32400 68.9 3.6e-147 519.2
Bhi05g00026 . 832 1226 FH2 protein (formin) Gene Family AT3G32400 66.0 3.0e-141 499.6
Bhi02g00293 CCT 1199 1593 FH2 protein (formin) Gene Family AT3G32400 65.2 1.1e-140 497.7
Bhi08g01136 CCT 913 1303 FH2 protein (formin) Gene Family AT3G32400 60.7 4.0e-130 462.6
Bhi09g03005 . 1 1412 FH2 protein (formin) Gene Family AT2G25050 51.3 0.0e+00 1161.4
Bhi02g00881 . 1 1279 FH2 protein (formin) Gene Family AT2G25050 51.1 2.0e-292 1003.0
Bhi02g00293 CCT 1200 1593 FH2 protein (formin) Gene Family AT5G07780 63.3 6.9e-124 441.8
Bhi08g01136 CCT 914 1303 FH2 protein (formin) Gene Family AT5G07780 57.9 2.1e-112 403.7
Bhi09g03005 . 1015 1405 FH2 protein (formin) Gene Family AT5G07780 54.5 3.0e-103 373.2
Bhi05g00026 . 833 1222 FH2 protein (formin) Gene Family AT5G07780 52.7 1.1e-102 371.3
Bhi02g00881 . 889 1278 FH2 protein (formin) Gene Family AT5G07780 53.5 3.1e-100 363.2
Bhi02g00882 . 642 1031 FH2 protein (formin) Gene Family AT5G07780 53.5 3.1e-100 363.2
Bhi02g00293 CCT 1 1602 FH2 protein (formin) Gene Family AT5G07740 58.4 0.0e+00 1157.9
Bhi02g00882 . 642 1023 FH2 protein (formin) Gene Family AT5G07740 66.9 7.0e-139 493.4
Bhi02g00293 CCT 1271 1600 FH2 protein (formin) Gene Family AT5G07760 74.4 4.3e-127 453.4
Bhi08g01136 CCT 989 1303 FH2 protein (formin) Gene Family AT5G07760 69.0 4.9e-115 413.3
Bhi02g00881 . 958 1278 FH2 protein (formin) Gene Family AT5G07760 64.4 5.3e-109 393.3
Bhi02g00882 . 711 1031 FH2 protein (formin) Gene Family AT5G07760 64.4 5.3e-109 393.3
Bhi09g03005 . 1089 1421 FH2 protein (formin) Gene Family AT5G07760 64.0 9.0e-109 392.5
Bhi05g00026 . 906 1227 FH2 protein (formin) Gene Family AT5G07760 61.0 5.5e-106 383.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010762 0 1 1 0 0 1 2 1 1 1 1 1 2 1 1 1 1 2 2 1 1 1 1 1 1 0 1 1 3 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi05g00026 Bhi_Chr05 FPKM 5.135289 7.059715 1.138464 1.196306 16.654703 16.220404 14.225432 0.0 0.098641 0.0