Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00051 GATGTGAAATTTGGTGTCAACACATCTTTTTGCCTGGAAATGTCCTGAACCTTAACCCTCTCCTCTCTTCTCAAGAAAACGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAATCAATCACTCTAAAATCCCATTTCTGCAAAATTCTCTCTGTTTCTAGATTTGCTGAATCAAAGAAAAACCCCATAGTTACATTCAGCATCGTCGCTTTGATTTCCTTGATTGGTAATGGGGCCAGGAGTGGCCTTGTCTGGCGCTGCAAAACAGGCCGAACTTCTCAGAAAAGATGGCAACCACTATTTTCAAAAGGGTCGAATTGGAGCTGCCATTGAAGCTTATACCGAGCGGAATGATTGGAAGAAGGTGGAGGAGGACTGTCGGAGGGCTATTCAGCTTGATAGCAGTTCTGTCAAGGCACATTACATGTTAGGATTAGCATTAATACAAAACAAAGAATATCCGGAAGGAATCAAGCATTTAGAGAAGGCTTTGGATCTTGGTAGGGGTGCAAATCCGAAGAGTTATATAGTAGAGGAGATATGGCAGGAACTTGCTAAAGCAAAATACAGGGAGTGGGAACAAGCGTCTACCGAACGTTCATGGGAATTGCAGACATTGAAAGAAGCTTGTGAGGCTGCCCTTGAACAAAAATACTTTCTTGACCAGTCTGAACTAGAAGGGTTCGTAGATGAAGCCGAAATTGCTCATCGGAATCAATTAAAATCGCTAAGAAGTGTGTTTGAAAAAGTTGCCGAGGCAGATGCGCCGTCAGAGGTACCTGATTATCTTTGTTGTAAAATCACACTTGATATTCTTCGCGACCCTGTTATTACTCCGAGTGGGGTTACGTATGAGAGAGCAGTGATTCTTGACCATTTTCATAAGGTTGGTAACTTTGATCCCATAACACGGGAGCTGCTTGACGAGTCCCAGCTAGTACCAAACTTAGCCATCAAGGAAGCAGTACAATCATTTCTAGATAAGCATGGATGGGCTTATAATACAGTTTAAGGAAACTTGTATTTTGAATGGGAACTCAATCAAGTTGATGGTTATGCCTGTCGTGAACGAATGGAAATACCTCAATCCCATGTCGCTAATGTCGTGATTATCTCCTCGATTCTTGTATATGGATCGTCGATTACGGTTTGTCATATATCATGCTTTCCATGACATTCTGAGGCTGTACTGTCAATTAAGTATGTGAGGTCCTGTCTTCTGATTTGGTCTTGTGCAGATTGTTACTATGAACTTGTTAATCTTCCTGTACAGTTATTACTTAAACCTTTGATTATGGTTTAGTTATTGAGGACTCTGTTCAGCAGGTA 1331 41.32 MGPGVALSGAAKQAELLRKDGNHYFQKGRIGAAIEAYTERNDWKKVEEDCRRAIQLDSSSVKAHYMLGLALIQNKEYPEGIKHLEKALDLGRGANPKSYIVEEIWQELAKAKYREWEQASTERSWELQTLKEACEAALEQKYFLDQSELEGFVDEAEIAHRNQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFHKVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTV 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1196176 1203228 - XM_039031010.1 Bhi05g00051 34261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00051 260 Gene3D Tetratricopeptide repeat domain 7 182 IPR011990 GO:0005515
Bhi05g00051 260 CDD RING-Ubox_CHIP 183 249 IPR045202 -
Bhi05g00051 260 SUPERFAMILY RING/U-box 178 257 - -
Bhi05g00051 260 SMART tpr_5 61 94 IPR019734 GO:0005515
Bhi05g00051 260 SMART tpr_5 21 60 IPR019734 GO:0005515
Bhi05g00051 260 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CHIP 37 258 IPR045200 GO:0000209|GO:0061630
Bhi05g00051 260 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CHIP 8 39 IPR045200 GO:0000209|GO:0061630
Bhi05g00051 260 ProSiteProfiles TPR repeat profile. 61 94 IPR019734 GO:0005515
Bhi05g00051 260 PANTHER OS08G0113300 PROTEIN 37 258 - -
Bhi05g00051 260 PANTHER OS08G0113300 PROTEIN 8 39 - -
Bhi05g00051 260 Pfam Tetratricopeptide repeat 62 90 IPR013105 -
Bhi05g00051 260 ProSiteProfiles U-box domain profile. 182 256 IPR003613 GO:0004842|GO:0016567
Bhi05g00051 260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 259 IPR013083 -
Bhi05g00051 260 SUPERFAMILY TPR-like 13 118 IPR011990 GO:0005515
Bhi05g00051 260 Pfam U-box domain 183 255 IPR003613 GO:0004842|GO:0016567
Bhi05g00051 260 SMART Ubox_2 186 249 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00049 Bhi-Chr5:1196176 Bhi05g00051 Bhi-Chr5:1196176 0 dispersed
Bhi05g00051 Bhi-Chr5:1196176 Bhi10g02116 Bhi-Chr10:53247366 5.47E-11 dispersed
Bhi05g00050 Bhi-Chr5:1196176 Bhi05g00051 Bhi-Chr5:1196176 4.64E-164 tandem
Bhi05g00051 Bhi-Chr5:1196176 Bhi05g00052 Bhi-Chr5:1196176 5.57E-164 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00051 K09561 - csv:101215457 489.189