Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi05g00052 | GATGTGAAATTTGGTGTCAACACATCTTTTTGCCTGGAAATGTCCTGAACCTTAACCCTCTCCTCTCTTCTCAAGAAAACGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAATCAATCACTCTAAAATCCCATTTCTGCAAAATTCTCTCTGTTTCTAGATTTGCTGAATCAAAGAAAAACCCCATAGTTACATTCAGCATCGTCGCTTTGATTTCCTTGATTGGTAATGGGGCCAGGAGTGGCCTTGTCTGGCGCTGCAAAACAGGCCGAACTTCTCAGAAAAGATGGCAACCACTATTTTCAAAAGGGTCGAATTGGAGCTGCCATTGAAGCTTATACCGAGCGGAAGTATTGATTGGAAGAAGGTGGAGGAGGACTGTCGGAGGGCTATTCAGCTTGATAGCAGTTCTGTCAAGGCACATTACATGTTAGGATTAGCATTAATACAAAACAAAGAATATCCGGAAGGAATCAAGCATTTAGAGAAGGCTTTGGATCTTGGTAGGGGTGCAAATCCGAAGAGTTATATAGTAGAGGAGATATGGCAGGAACTTGCTAAAGCAAAATACAGGGAGTGGGAACAAGCGTCTACCGAACGTTCATGGGAATTGCAGACATTGAAAGAAGCTTGTGAGGCTGCCCTTGAACAAAAATACTTTCTTGACCAGTCTGAACTAGAAGGGTTCGTAGATGAAGCCGAAATTGCTCATCGGAATCAATTAAAATCGCTAAGAAGTGTGTTTGAAAAAGTTGCCGAGGCAGATGCGCCGTCAGAGGTACCTGATTATCTTTGTTGTAAAATCACACTTGATATTCTTCGCGACCCTGTTATTACTCCGAGTGGGGTTACGTATGAGAGAGCAGTGATTCTTGACCATTTTCATAAGGTTGGTAACTTTGATCCCATAACACGGGAGCTGCTTGACGAGTCCCAGCTAGTACCAAACTTAGCCATCAAGGAAGCAGTACAATCATTTCTAGATAAGCATGGATGGGCTTATAATACAGTTTAAGGAAACTTGTATTTTGAATGGGAACTCAATCAAGTTGATGGTTATGCCTGTCGTGAACGAATGGAAATACCTCAATCCCATGTCGCTAATGTCGTGATTATCTCCTCGATTCTTGTATATGGATCGTCGATTACGGTTTGTCATATATCATGCTTTCCATGACATTCTGAGGCTGTACTGTCAATTAAGTATGTGAGGTCCTGTCTTCTGATTTGGTCTTGTGCAGATTGTTACTATGAACTTGTTAATCTTCCTGTACAGTTATTACTTAAACCTTTGATTATGGTTTAGTTATTGAGGACTCTGTTCAGCAGGTA | 1335 | 41.27 | MATTIFKRVELELPLKLIPSGSIDWKKVEEDCRRAIQLDSSSVKAHYMLGLALIQNKEYPEGIKHLEKALDLGRGANPKSYIVEEIWQELAKAKYREWEQASTERSWELQTLKEACEAALEQKYFLDQSELEGFVDEAEIAHRNQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFHKVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTV | 242 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1196176 | 1203228 | - | XM_039031011.1 | Bhi05g00052 | 34262 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi05g00052 | 242 | ProSiteProfiles | U-box domain profile. | 164 | 238 | IPR003613 | GO:0004842|GO:0016567 | |
Bhi05g00052 | 242 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 163 | 241 | IPR013083 | - | |
Bhi05g00052 | 242 | ProSiteProfiles | TPR repeat profile. | 43 | 76 | IPR019734 | GO:0005515 | |
Bhi05g00052 | 242 | Gene3D | Tetratricopeptide repeat domain | 21 | 105 | IPR011990 | GO:0005515 | |
Bhi05g00052 | 242 | SUPERFAMILY | RING/U-box | 160 | 239 | - | - | |
Bhi05g00052 | 242 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE CHIP | 24 | 240 | IPR045200 | GO:0000209|GO:0061630 | |
Bhi05g00052 | 242 | SUPERFAMILY | TPR-like | 24 | 96 | IPR011990 | GO:0005515 | |
Bhi05g00052 | 242 | PANTHER | OS08G0113300 PROTEIN | 24 | 240 | - | - | |
Bhi05g00052 | 242 | CDD | RING-Ubox_CHIP | 165 | 231 | IPR045202 | - | |
Bhi05g00052 | 242 | Pfam | U-box domain | 165 | 237 | IPR003613 | GO:0004842|GO:0016567 | |
Bhi05g00052 | 242 | SMART | Ubox_2 | 168 | 231 | IPR003613 | GO:0004842|GO:0016567 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi05g00050 | Bhi-Chr5:1196176 | Bhi05g00052 | Bhi-Chr5:1196176 | 4.25E-177 | dispersed | |
Bhi05g00052 | Bhi-Chr5:1196176 | Bhi10g02116 | Bhi-Chr10:53247366 | 1.04E-10 | dispersed | |
Bhi05g00051 | Bhi-Chr5:1196176 | Bhi05g00052 | Bhi-Chr5:1196176 | 5.57E-164 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi05g00052 | K09561 | - | csv:101215457 | 425.246 |