Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00078 GCAAAATAGAAAGGAAGAAAAAGGGAAGAATGGTTGGTATGAGAATGGCATTGCATCGGCCTTACCTTTACCTACCCAAACGCTCAATAAGAAATAAAGTGATTTTAGATTCACTGTCTTACCAACCCCATTTCCCACCATCACCCTTCAAAACCTCCATCTCTTTCGCCCCCTTTTACCTTCAAAACAACACAGATTTGCCTCTCAGATTACACTACACTTTCAATCTCCGACCATGGGCGGCCGCACCGTCTTCTCTTTGGCTGAGGTTGCCTCTCATGACAATCGCAACGACTGCTGGTTGATCATTGAAGATAAGACAAGTTGTTCACCGAATTTTTGGGTTCGTGAAGCGAGAGAAATAATAGAATTGGCAAGAGAAAGAGAGAGTTCTTCCGGCGATGTGTATGATGTAACAAAGTTCCTAGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAGGAGTTGGTAAGGATGCAACCAATGATTTTTTCGACGTTGGGCACAGTAGCGCTGCTAGAGCAATGATGGAAGAATTTTACGTAGGCGATATCGATAGCTCAACTATTCCTGCAAAAAGAACGTACACTCCTCCAAAGCAACCCCTATACAACCAAGACAAGACACCAGAGTTCATTATCAAGGTCCTCCAGTTTCTTGCTCCCCTGATAATTTTGGGCTTGGCTTTTGGCATCCACCTCTATACCAAAACAACTTAAACATTGAAACTATATCTTTTTTTTTTTTTTTTTGAAAATTGGTTCATTTTGTTCCAATGAGTATACTTTGCTTGAAACTTGTTGTATGATGCCACTAAAGAATATGTCAACTTCCTTTGTTCAGCA 847 41.32 MGGRTVFSLAEVASHDNRNDCWLIIEDKTSCSPNFWVREAREIIELARERESSSGDVYDVTKFLEDHPGGDEVLLSGVGKDATNDFFDVGHSSAARAMMEEFYVGDIDSSTIPAKRTYTPPKQPLYNQDKTPEFIIKVLQFLAPLIILGLAFGIHLYTKTT 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1507496 1509703 + XM_039033088.1 Bhi05g00078 34288

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00078 161 PANTHER CYTOCHROME B5 54 159 - -
Bhi05g00078 161 PRINTS Cytochrome B5 signature 57 67 IPR001199 -
Bhi05g00078 161 PRINTS Cytochrome B5 signature 67 81 IPR001199 -
Bhi05g00078 161 PRINTS Cytochrome B5 signature 82 89 IPR001199 -
Bhi05g00078 161 PRINTS Cytochrome B5 signature 95 107 IPR001199 -
Bhi05g00078 161 PANTHER - 54 159 - -
Bhi05g00078 161 Gene3D - 3 113 IPR036400 -
Bhi05g00078 161 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 54 116 IPR036400 -
Bhi05g00078 161 Pfam Cytochrome b5-like Heme/Steroid binding domain 54 107 IPR001199 -
Bhi05g00078 161 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 63 70 IPR018506 GO:0020037
Bhi05g00078 161 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 108 IPR001199 -
Bhi05g00078 161 SMART Cyt_b5_2 7 108 IPR001199 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00078 K23490 CYB5; cytochrome b5 - csv:101212882 247.669
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00078 Bhi-Chr5:1507496 Bhi05g00080 Bhi-Chr5:1507507 4.27E-92 dispersed
Bhi05g00078 Bhi-Chr5:1507496 Bhi05g00079 Bhi-Chr5:1507499 1.62E-74 tandem
Bhi12g01507 Bhi-Chr12:48584092 Bhi05g00078 Bhi-Chr5:1507496 2.62E-61 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi12g00682 . 1 134 NADPH P450 reductases AT5G53560 78.4 1.5e-58 223.0
Bhi01g00242 . 1 133 NADPH P450 reductases AT5G53560 68.4 2.3e-51 199.1
Bhi12g01507 . 1 133 NADPH P450 reductases AT5G53560 66.9 4.7e-49 191.4
Bhi05g00080 . 4 131 NADPH P450 reductases AT5G53560 66.4 7.6e-47 184.1
Bhi07g01647 . 45 175 NADPH P450 reductases AT5G53560 65.4 9.9e-47 183.7
Bhi05g00078 . 4 159 NADPH P450 reductases AT5G53560 55.1 6.6e-43 171.0
Bhi05g00079 . 29 149 NADPH P450 reductases AT5G53560 61.3 3.4e-39 158.7
Bhi05g00081 . 26 128 NADPH P450 reductases AT5G53560 69.9 1.7e-38 156.4
Bhi01g00242 . 1 132 NADPH P450 reductases AT5G48810 64.9 1.2e-47 186.8
Bhi12g01507 . 1 133 NADPH P450 reductases AT5G48810 62.2 2.5e-45 179.1
Bhi12g00682 . 1 134 NADPH P450 reductases AT5G48810 59.6 2.8e-44 175.6
Bhi05g00080 . 2 132 NADPH P450 reductases AT5G48810 60.9 3.7e-44 175.3
Bhi07g01647 . 45 174 NADPH P450 reductases AT5G48810 60.4 7.6e-42 167.5
Bhi05g00078 . 2 160 NADPH P450 reductases AT5G48810 50.3 9.3e-40 160.6
Bhi01g00242 . 22 133 NADPH P450 reductases AT2G32720 84.8 1.1e-50 196.8
Bhi12g01507 . 22 133 NADPH P450 reductases AT2G32720 79.5 8.4e-46 180.6
Bhi07g01647 . 66 175 NADPH P450 reductases AT2G32720 79.5 3.2e-45 178.7
Bhi05g00079 . 40 150 NADPH P450 reductases AT2G32720 72.8 2.1e-41 166.0
Bhi05g00080 . 21 132 NADPH P450 reductases AT2G32720 71.4 2.8e-41 165.6
Bhi05g00081 . 18 129 NADPH P450 reductases AT2G32720 72.3 8.1e-41 164.1
Bhi05g00078 . 57 160 NADPH P450 reductases AT2G32720 75.0 3.1e-40 162.2
Bhi12g00682 . 22 133 NADPH P450 reductases AT2G32720 65.2 1.5e-39 159.8
Bhi04g01160 . 1 130 NADPH P450 reductases AT1G26340 53.7 3.2e-37 152.1
Bhi03g02557 . 2 281 NADPH P450 reductases AT5G17770 80.0 4.3e-129 458.4
Bhi11g02743 . 2 280 NADPH P450 reductases AT5G17770 76.7 8.5e-125 444.1
Bhi10g00465 . 1 282 NADPH P450 reductases AT5G17770 71.7 2.4e-119 426.0
Bhi12g00682 . 1 134 NADPH P450 reductases AT5G53560 78.4 1.5e-58 223.0
Bhi01g00242 . 1 133 NADPH P450 reductases AT5G53560 68.4 2.3e-51 199.1
Bhi12g01507 . 1 133 NADPH P450 reductases AT5G53560 66.9 4.7e-49 191.4
Bhi05g00080 . 4 131 NADPH P450 reductases AT5G53560 66.4 7.6e-47 184.1
Bhi07g01647 . 45 175 NADPH P450 reductases AT5G53560 65.4 9.9e-47 183.7
Bhi05g00078 . 4 159 NADPH P450 reductases AT5G53560 55.1 6.6e-43 171.0
Bhi05g00079 . 29 149 NADPH P450 reductases AT5G53560 61.3 3.4e-39 158.7
Bhi05g00081 . 26 128 NADPH P450 reductases AT5G53560 69.9 1.7e-38 156.4
Bhi01g00242 . 1 132 NADPH P450 reductases AT5G48810 64.9 1.2e-47 186.8
Bhi12g01507 . 1 133 NADPH P450 reductases AT5G48810 62.2 2.5e-45 179.1
Bhi12g00682 . 1 134 NADPH P450 reductases AT5G48810 59.6 2.8e-44 175.6
Bhi05g00080 . 2 132 NADPH P450 reductases AT5G48810 60.9 3.7e-44 175.3
Bhi07g01647 . 45 174 NADPH P450 reductases AT5G48810 60.4 7.6e-42 167.5
Bhi05g00078 . 2 160 NADPH P450 reductases AT5G48810 50.3 9.3e-40 160.6
Bhi01g00242 . 22 133 NADPH P450 reductases AT2G32720 84.8 1.1e-50 196.8
Bhi12g01507 . 22 133 NADPH P450 reductases AT2G32720 79.5 8.4e-46 180.6
Bhi07g01647 . 66 175 NADPH P450 reductases AT2G32720 79.5 3.2e-45 178.7
Bhi05g00079 . 40 150 NADPH P450 reductases AT2G32720 72.8 2.1e-41 166.0
Bhi05g00080 . 21 132 NADPH P450 reductases AT2G32720 71.4 2.8e-41 165.6
Bhi05g00081 . 18 129 NADPH P450 reductases AT2G32720 72.3 8.1e-41 164.1
Bhi05g00078 . 57 160 NADPH P450 reductases AT2G32720 75.0 3.1e-40 162.2
Bhi12g00682 . 22 133 NADPH P450 reductases AT2G32720 65.2 1.5e-39 159.8
Bhi04g01160 . 1 130 NADPH P450 reductases AT1G26340 53.7 3.2e-37 152.1
Bhi03g02557 . 2 281 NADPH P450 reductases AT5G17770 80.0 4.3e-129 458.4
Bhi11g02743 . 2 280 NADPH P450 reductases AT5G17770 76.7 8.5e-125 444.1
Bhi10g00465 . 1 282 NADPH P450 reductases AT5G17770 71.7 2.4e-119 426.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000252 4 9 3 5 3 5 9 4 4 3 4 4 8 5 5 9 5 6 9 4 5 4 5 5 4 4 4 10 5 2 156
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi05g00078 Bhi_Chr05 FPKM 26.868174 29.126677 7.220233 8.539319 9.441819 9.837091 9.319855 3.144218 3.864468 3.297782