Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00081 GAACATTTGTCAATGTGCCTTCAATTTCTTTTCTCTTTGATGGGTTTCTGTTTTTTTGCTCTTTTTTGGATCATTCTTATCTTGTTTCTAATTTATATGGTTAGCACTCCACTGGGTCTATTTGATTTTGACTGATGGAGTTTCATCGATGGGATTACTGTTCTGTGTTCTGTTTGATCCTGAATTGGGCTTCTGACTCTTACTTTGGTGTGTATGATGTAACAAAGTTCCTAGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAGGAGTTGGTAAGGATGCAACCAATGATTTTTTCGACGTTGGGCACAGTAGCGCTGCTAGAGCAATGATGGAAGAATTTTACGTAGGCGATATCGATAGCTCAACTATTCCTGCAAAAAGAACGTACACTCCTCCAAAGCAACCCCTATACAACCAAGACAAGACACCAGAGTTCATTATCAAGGTCCTCCAGTTTCTTGCTCCCCTGATAATTTTGGGCTTGGCTTTTGGCATCCACCTCTATACCAAAACAACTTAAACATTGAAACTATATCTTTTTTTTTTTTTTTTTGAAAATTGGTTCATTTTGTTCCAATGAGTATACTTTGCTTGAAACTTGTTGTATGATGCCACTAAAGAATATGTCAACTTCCTTTGTTCAGCA 653 37.98 MEFHRWDYCSVFCLILNWASDSYFGVYDVTKFLEDHPGGDEVLLSGVGKDATNDFFDVGHSSAARAMMEEFYVGDIDSSTIPAKRTYTPPKQPLYNQDKTPEFIIKVLQFLAPLIILGLAFGIHLYTKTT 130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1507821 1509703 + XM_039033091.1 Bhi05g00081 34291

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00081 130 Gene3D - 13 80 IPR036400 -
Bhi05g00081 130 PANTHER - 26 128 - -
Bhi05g00081 130 SMART Cyt_b5_2 16 77 IPR001199 -
Bhi05g00081 130 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 32 39 IPR018506 GO:0020037
Bhi05g00081 130 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 18 77 IPR001199 -
Bhi05g00081 130 Pfam Cytochrome b5-like Heme/Steroid binding domain 26 76 IPR001199 -
Bhi05g00081 130 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 26 85 IPR036400 -
Bhi05g00081 130 PANTHER CYTOCHROME B5 26 128 - -
Bhi05g00081 130 PRINTS Cytochrome B5 signature 26 36 IPR001199 -
Bhi05g00081 130 PRINTS Cytochrome B5 signature 36 50 IPR001199 -
Bhi05g00081 130 PRINTS Cytochrome B5 signature 51 58 IPR001199 -
Bhi05g00081 130 PRINTS Cytochrome B5 signature 64 76 IPR001199 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00081 K23490 CYB5; cytochrome b5 - csv:101212882 209.149
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00079 Bhi-Chr5:1507499 Bhi05g00081 Bhi-Chr5:1507821 1.95E-74 dispersed
Bhi05g00081 Bhi-Chr5:1507821 Bhi12g01507 Bhi-Chr12:48584092 1.35E-51 dispersed
Bhi05g00080 Bhi-Chr5:1507507 Bhi05g00081 Bhi-Chr5:1507821 7.46E-74 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi12g00682 . 1 134 NADPH P450 reductases AT5G53560 78.4 1.5e-58 223.0
Bhi01g00242 . 1 133 NADPH P450 reductases AT5G53560 68.4 2.3e-51 199.1
Bhi12g01507 . 1 133 NADPH P450 reductases AT5G53560 66.9 4.7e-49 191.4
Bhi05g00080 . 4 131 NADPH P450 reductases AT5G53560 66.4 7.6e-47 184.1
Bhi07g01647 . 45 175 NADPH P450 reductases AT5G53560 65.4 9.9e-47 183.7
Bhi05g00078 . 4 159 NADPH P450 reductases AT5G53560 55.1 6.6e-43 171.0
Bhi05g00079 . 29 149 NADPH P450 reductases AT5G53560 61.3 3.4e-39 158.7
Bhi05g00081 . 26 128 NADPH P450 reductases AT5G53560 69.9 1.7e-38 156.4
Bhi01g00242 . 1 132 NADPH P450 reductases AT5G48810 64.9 1.2e-47 186.8
Bhi12g01507 . 1 133 NADPH P450 reductases AT5G48810 62.2 2.5e-45 179.1
Bhi12g00682 . 1 134 NADPH P450 reductases AT5G48810 59.6 2.8e-44 175.6
Bhi05g00080 . 2 132 NADPH P450 reductases AT5G48810 60.9 3.7e-44 175.3
Bhi07g01647 . 45 174 NADPH P450 reductases AT5G48810 60.4 7.6e-42 167.5
Bhi05g00078 . 2 160 NADPH P450 reductases AT5G48810 50.3 9.3e-40 160.6
Bhi01g00242 . 22 133 NADPH P450 reductases AT2G32720 84.8 1.1e-50 196.8
Bhi12g01507 . 22 133 NADPH P450 reductases AT2G32720 79.5 8.4e-46 180.6
Bhi07g01647 . 66 175 NADPH P450 reductases AT2G32720 79.5 3.2e-45 178.7
Bhi05g00079 . 40 150 NADPH P450 reductases AT2G32720 72.8 2.1e-41 166.0
Bhi05g00080 . 21 132 NADPH P450 reductases AT2G32720 71.4 2.8e-41 165.6
Bhi05g00081 . 18 129 NADPH P450 reductases AT2G32720 72.3 8.1e-41 164.1
Bhi05g00078 . 57 160 NADPH P450 reductases AT2G32720 75.0 3.1e-40 162.2
Bhi12g00682 . 22 133 NADPH P450 reductases AT2G32720 65.2 1.5e-39 159.8
Bhi04g01160 . 1 130 NADPH P450 reductases AT1G26340 53.7 3.2e-37 152.1
Bhi03g02557 . 2 281 NADPH P450 reductases AT5G17770 80.0 4.3e-129 458.4
Bhi11g02743 . 2 280 NADPH P450 reductases AT5G17770 76.7 8.5e-125 444.1
Bhi10g00465 . 1 282 NADPH P450 reductases AT5G17770 71.7 2.4e-119 426.0
Bhi12g00682 . 1 134 NADPH P450 reductases AT5G53560 78.4 1.5e-58 223.0
Bhi01g00242 . 1 133 NADPH P450 reductases AT5G53560 68.4 2.3e-51 199.1
Bhi12g01507 . 1 133 NADPH P450 reductases AT5G53560 66.9 4.7e-49 191.4
Bhi05g00080 . 4 131 NADPH P450 reductases AT5G53560 66.4 7.6e-47 184.1
Bhi07g01647 . 45 175 NADPH P450 reductases AT5G53560 65.4 9.9e-47 183.7
Bhi05g00078 . 4 159 NADPH P450 reductases AT5G53560 55.1 6.6e-43 171.0
Bhi05g00079 . 29 149 NADPH P450 reductases AT5G53560 61.3 3.4e-39 158.7
Bhi05g00081 . 26 128 NADPH P450 reductases AT5G53560 69.9 1.7e-38 156.4
Bhi01g00242 . 1 132 NADPH P450 reductases AT5G48810 64.9 1.2e-47 186.8
Bhi12g01507 . 1 133 NADPH P450 reductases AT5G48810 62.2 2.5e-45 179.1
Bhi12g00682 . 1 134 NADPH P450 reductases AT5G48810 59.6 2.8e-44 175.6
Bhi05g00080 . 2 132 NADPH P450 reductases AT5G48810 60.9 3.7e-44 175.3
Bhi07g01647 . 45 174 NADPH P450 reductases AT5G48810 60.4 7.6e-42 167.5
Bhi05g00078 . 2 160 NADPH P450 reductases AT5G48810 50.3 9.3e-40 160.6
Bhi01g00242 . 22 133 NADPH P450 reductases AT2G32720 84.8 1.1e-50 196.8
Bhi12g01507 . 22 133 NADPH P450 reductases AT2G32720 79.5 8.4e-46 180.6
Bhi07g01647 . 66 175 NADPH P450 reductases AT2G32720 79.5 3.2e-45 178.7
Bhi05g00079 . 40 150 NADPH P450 reductases AT2G32720 72.8 2.1e-41 166.0
Bhi05g00080 . 21 132 NADPH P450 reductases AT2G32720 71.4 2.8e-41 165.6
Bhi05g00081 . 18 129 NADPH P450 reductases AT2G32720 72.3 8.1e-41 164.1
Bhi05g00078 . 57 160 NADPH P450 reductases AT2G32720 75.0 3.1e-40 162.2
Bhi12g00682 . 22 133 NADPH P450 reductases AT2G32720 65.2 1.5e-39 159.8
Bhi04g01160 . 1 130 NADPH P450 reductases AT1G26340 53.7 3.2e-37 152.1
Bhi03g02557 . 2 281 NADPH P450 reductases AT5G17770 80.0 4.3e-129 458.4
Bhi11g02743 . 2 280 NADPH P450 reductases AT5G17770 76.7 8.5e-125 444.1
Bhi10g00465 . 1 282 NADPH P450 reductases AT5G17770 71.7 2.4e-119 426.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000252 4 9 3 5 3 5 9 4 4 3 4 4 8 5 5 9 5 6 9 4 5 4 5 5 4 4 4 10 5 2 156
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi05g00081 Bhi_Chr05 FPKM 5.227484 5.480723 9.530333 11.11167 7.852691 7.541845 6.607024 18.929106 19.168022 19.116516