Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00192 AAATTCTGTTCTAAACCCCCAAAAGGCCAAAGATCGTCTTCTCTAGGATTCTGTTTCCTCAATTTTCAATTTTTTCCCCTTCTTTTCTCTTTTTCTTTGGTTCCTTGTTTTCATCCGAAAGCAAATCTCAGAGTTGTCTAGTAAAAGCAGAAATAAAGAAACCCAAACCATTAAAGTAAAAGGATTGTTCAAGCTTTCATCTGCTTTTTTGGGTTTGTTGTTTTTATTTTCAAAACGATTCAAAAGAGGTTTTGATTGATTGTTGAACAGAATTCAAGTCATGGGTATTGCTGTTTCTGGATTTTTTCTTCCCTCACTCTTCTTTTACTTTTGGGAAATTAAAAGCTTCATTAAATGGGACTAATAGATGAAATAGAAGTTAGAGAAATTTATGAAGCTTTTGATTTATATTTGATGGTGGGTGGTTTTTTGTGGTTGAAGATTTTTGGCTGCTGTCAAACAATATGAAGAGTGACGTTAAGATTAAAAGGGGGAGGAGGGCTGGAAAAGGGGAGAATATTAGGAAGATAATGAAGTGTTTATGTTCTGGAGAGAGAACAGCTGGAGATGATATGATTCCTGCAGCAGAATCGCCTTCGGTTTTCGAGAATTCAGCAAGCGGACGCTCTTCACGAACTGGCGAGATCATCAAGAAACCAGAAATTGGTAATATAGAAGAAGCCGAGTCTTCGCTTCGTGAGAGTGGTTGTTTAAATTATGAGGAAGCAAGAGCATTGCTGGGAAGATATGAATATCAAAAAGGGAATATTGAAGCTGCTCTTCATGTATTTGAAGGAATAGACATCACTGCTGTAACTAGTAAGATAATGATCTCCATAGCTAGAAGAGGAGACCATCCACGGAGACGATCACAAAATTTTACTGTCCCGCCAATGTCTATGCATGCTGTCAGTTTACTCTTGGAAGCCATCCTTCTCAAAGCAAAATCATTGCAAGGCCTTGGGAGGTTCGGAGAAGCTGCTCAATCTTGCAAAGTTATTCTGGACATACTTGAATCTTCATTTCCCGAAGGCTTGCCTGAAAACTTTGGTGCTGATTGTAAATTGCAGGAGACAGTTACAAAGGGCGTGGAGTTGCTACCGGAGTTATGGAAGCTAGCTGATGCTTCTCAAGAAGCAATCCTTTCATACCGACGAGCACTTCTTCATCAGTGGAACCTTGATGCGGGAACCACTGCTCGAATTCAGAAAGAGTTTGCCATTTTTCTTCTGTACAGTGGATGTGAAGCTTGCCCTCCAAATCTCCGGTCCCAAATGGACAGCTCATTTGTACCAAAAAACAATATTGAAGAAGCTATACTCTTATTTATGATACTACTTAGAAAAGTTGTTCTTAAGAGGATTGATTGGGATCCATCAATCTTGGATCATCTCTCCTTTGCTCTAACAATATCAGGGGATACAAGGGCTTTAGCAGGTCAAATAGAGGAATTGCCTCCTGGGATTTTACATCGACAAGAACGGTATCATGCTCTAGCTCTTTGCTACTATGGAGCGGGTGAAAACTTGACTGCTTTGAATCTGTTGAGGAAAGTATTGGGTAGAAACGAGGATCCTAATTCGCTTCCCGCTTTATTGATGGCATCGAAGATTTGTGGAGAGAACTGCGACCTTGCTGAAGAGGGAACGAGTTTTGCTCATAGAGCTCTTCAAAACTTGGATCATAGATGTGATCAATTAGAAGGTGTTGCCAATTGTTTGTTGGGTGTCTCACTGTCTGTATATTCTAAATCCGCCACTGTGGATTCCGAGAAGTCCACCAGACAATCTGAGGCGATTGAGGCCTTGGAAGCCGCACGGAAGAAGACTAGAATGACTGACCCTAATGTTCTCTATCATTCGAGTCTTGAATATGCCAAGGAGAGGAAGTTAGATTCAGCACTTTATTATGCTAAGAAGTGTCTCAAATTGGAAGGTGGATCTAATGTTAAAACTTGGTTACTACTGGCTAGGATTCTCTCTGCCCAAAAACGATTTACAGATAGCGAAAGTATTCTAAATGCAGCTCTGGATCAGACAGGGAAATGGGAACAAGCCGAGTTGCTTCGAACAAAAGCAAAGCTTCTAATTGCACAGGATGAGTTTAAAGGTGCTATTGAGACTTATAGTCAGTTACTGGCTGTTTTTCAAGTTCAGAGTAAAAGTTTCAATTTGGGAGATAAGAAGCTACACGAGAGCAGTAGAAACTATACTAGAAGATTGCAATCGGAAGTGTGGCATGATCTAGCTCTAATCTACATGAGGCTCTCACAATGGCACGACGCGGAGGCATGCCTTTCAAAGTCGAAGGCCATCTCTTTTCATTCAGCATCTAGATATCATATTGCAGGTATGCTTTATGAAGCAAAAGGCTTGTATAAAGAAGCTCTAAAAGCTTTTATGGCTGCTCTAGACATTGATCCCATTCATGTCCCGAGCTTGGTCTCGTCCGCTGTGGTTATCAGACATCTCGGCCACCAATCGCATCCCGTCATTCGCAGCTTTTTGATGGATGCTTTACGGCTCGACCAGACAAACCATGAGGCATGGTACAATCTCGGGCTATTCTACAAATCTGAAGGAACCAAGTCCTCATTGGTAGAAGCTGTTGAATGTTTTGAGGCTGCAACTTTTCTTGAAGAGTCTGCTCCTGTTGAACCCTTTAGATAAAAACAGCTTCTGCTCAAGCATTTTTAATTTTTTTTAAACACATTATTTTCCTTGTATCTTCTGCTTCAAAATCTATTTTATACCTTCCCTCATATTGTACAACAACAGAAAATCAATAAATGGAAAAGTTTCTCTCTGATTCTGTA 2815 40.43 MKSDVKIKRGRRAGKGENIRKIMKCLCSGERTAGDDMIPAAESPSVFENSASGRSSRTGEIIKKPEIGNIEEAESSLRESGCLNYEEARALLGRYEYQKGNIEAALHVFEGIDITAVTSKIMISIARRGDHPRRRSQNFTVPPMSMHAVSLLLEAILLKAKSLQGLGRFGEAAQSCKVILDILESSFPEGLPENFGADCKLQETVTKGVELLPELWKLADASQEAILSYRRALLHQWNLDAGTTARIQKEFAIFLLYSGCEACPPNLRSQMDSSFVPKNNIEEAILLFMILLRKVVLKRIDWDPSILDHLSFALTISGDTRALAGQIEELPPGILHRQERYHALALCYYGAGENLTALNLLRKVLGRNEDPNSLPALLMASKICGENCDLAEEGTSFAHRALQNLDHRCDQLEGVANCLLGVSLSVYSKSATVDSEKSTRQSEAIEALEAARKKTRMTDPNVLYHSSLEYAKERKLDSALYYAKKCLKLEGGSNVKTWLLLARILSAQKRFTDSESILNAALDQTGKWEQAELLRTKAKLLIAQDEFKGAIETYSQLLAVFQVQSKSFNLGDKKLHESSRNYTRRLQSEVWHDLALIYMRLSQWHDAEACLSKSKAISFHSASRYHIAGMLYEAKGLYKEALKAFMAALDIDPIHVPSLVSSAVVIRHLGHQSHPVIRSFLMDALRLDQTNHEAWYNLGLFYKSEGTKSSLVEAVECFEAATFLEESAPVEPFR 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3585054 3589997 - XM_039031934.1 Bhi05g00192 34402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00192 734 Pfam Tetratricopeptide repeat 472 537 - -
Bhi05g00192 734 Gene3D - 567 731 - -
Bhi05g00192 734 SUPERFAMILY TPR-like 529 706 IPR011990 GO:0005515
Bhi05g00192 734 Pfam Tetratricopeptide repeat 623 654 IPR019734 GO:0005515
Bhi05g00192 734 Gene3D Tetratricopeptide repeat domain 65 566 IPR011990 GO:0005515
Bhi05g00192 734 PANTHER PROTEIN NPGR2 13 734 - -
Bhi05g00192 734 PANTHER PROTEIN NPG1 13 734 IPR043376 -
Bhi05g00192 734 SMART tpr_5 692 728 IPR019734 GO:0005515
Bhi05g00192 734 SMART tpr_5 531 564 IPR019734 GO:0005515
Bhi05g00192 734 SMART tpr_5 495 528 IPR019734 GO:0005515
Bhi05g00192 734 SMART tpr_5 338 371 IPR019734 GO:0005515
Bhi05g00192 734 SMART tpr_5 153 186 IPR019734 GO:0005515
Bhi05g00192 734 SMART tpr_5 588 621 IPR019734 GO:0005515
Bhi05g00192 734 SMART tpr_5 460 493 IPR019734 GO:0005515
Bhi05g00192 734 SMART tpr_5 622 655 IPR019734 GO:0005515
Bhi05g00192 734 SUPERFAMILY TPR-like 440 560 IPR011990 GO:0005515
Bhi05g00192 734 ProSiteProfiles TPR repeat profile. 622 655 IPR019734 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00702 Bhi-Chr1:13040345 Bhi05g00192 Bhi-Chr5:3585054 0 dispersed
Bhi01g00703 Bhi-Chr1:13040366 Bhi05g00192 Bhi-Chr5:3585054 0 dispersed
Bhi05g00192 Bhi-Chr5:3585054 Bhi05g00193 Bhi-Chr5:3585054 0 tandem
Bhi09g03653 Bhi-Chr9:91114274 Bhi05g00192 Bhi-Chr5:3585054 0 transposed
Bhi01g00697 Bhi-Chr1:13039331 Bhi05g00192 Bhi-Chr5:3585054 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00192 K21843 - csv:101223229 1326.61