Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00242 ATGATAGACACTGATAGACTTCCCAAAAGAAAACTTATTAATTCCCCCAAAAAAGAAAAGAAAAGAAAAGAAACAATGACGGGCTCTGGTTCTCCTTGTGGAGCTTGTAAATTCTTGAGAAGAAAATGTGTTAGAGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGAGCTACTCATTTTGCTGCCATTCATAAAGTGTTTGGAGCTAGTAATGTTTCTAAGCTTCTTGCTCGTCTTCCTATTAGTGAAAGATGTGAGGCAGCTGTTACTATTTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCTCTCCAACAACAGGTTGTGAGTCTTCAAGCACAACTTGCTTCTCTGAAGGAACAAGCAGCGGAAAGTATTATGAATGCGTCCGGTAATGGGGGCGGAGTGAATGAGAAGATTAATAGTAGAAAGGTTCCTTCTCATCCCCAAGATCTCCATAGCTGGTTTCAATCGGAGCAACCGAACATAACGCTCGAGTTCAATCCGACTCCGATACCGAATAATAATAATAATTCTGCATCAAATTACCCTAATTATTATGATGAGAATTATCACATTATGGTCAATTCACACTCCAATGGGAACTATGAGCATCACATGGCTAAAATGGAAGAAAGTGGATCATATGGAAGCTTTGAAGAAACCTCAGGCTATTCCATGTACACTCTTGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCAGTTGCTTTTGGCAATAGACATTGGTGA 813 38.99 MIDTDRLPKRKLINSPKKEKKRKETMTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGGGVNEKINSRKVPSHPQDLHSWFQSEQPNITLEFNPTPIPNNNNNSASNYPNYYDENYHIMVNSHSNGNYEHHMAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRHW 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4598581 4606376 + XM_039033064.1 Bhi05g00242 34452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00242 270 Pfam Lateral organ boundaries (LOB) domain 32 130 IPR004883 -
Bhi05g00242 270 MobiDBLite consensus disorder prediction 1 26 - -
Bhi05g00242 270 PANTHER LOB DOMAIN CONTAINING PROTEIN 26 267 - -
Bhi05g00242 270 ProSiteProfiles LOB domain profile. 31 133 IPR004883 -
Bhi05g00242 270 Coils Coil 112 139 - -
Bhi05g00242 270 PANTHER LOB DOMAIN-CONTAINING PROTEIN-RELATED 26 267 - -
Bhi05g00242 270 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00242 Bhi-Chr5:4598581 Bhi09g01233 Bhi-Chr9:29497615 8.44E-60 dispersed
Bhi05g00242 Bhi-Chr5:4598581 Bhi05g00243 Bhi-Chr5:4615773 1.97E-56 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1097 PF03195 LOB 1.30E-35 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00242 K13945 - csv:101214764 435.647