Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00243 TTCCCCCCCTTTTTTTTAATTCCTATGGCTTCTTCTTCTTCCTCTAGTGTGTCATGCGGTGGCGGTGGCAGTGGCGGTGGCGGTGGTAGTGGCGGGTCGCCTTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTACTTTTGCTCAGAGCAAGGGGCTGCAAGATTTGCTGCCATTCATAAAGTGTTTGGTGCAAGTAATGTTTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGATGTGAAGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTCCAACAACAGGTGGCCTACTTACAAACACAGCTGATGCAAGCCAAGGCTCAACTGGCACAAACTCTAATGGATTCAAGAGGCAATATGGAGATTCAATGGACAGAAAATTTCAATAACAATCTCTCCAATGGAATCCCAAATAACTTTCAAAATAATTATCAAACTCAGATTATGAACAACAACCCAGCAGTTTCCCCTCAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTATTATTCATTAACCAAATTCATAATTTTCATGAGAGCCAAAGCAGATCACCAGAAGAATCTCAATTTCTTCAACCCTTCCCTACAAAAAAACTACCTTCTTCTCATGTTCATGATCTTGGGGAACTCCAAGCTTTGGCCCTTAGAATGATGAGAAACTAATGAAAAAAAGGGTTTAATTTAATTTCATTGTTTTCTGAAAGACAATG 797 40.15 MASSSSSSVSCGGGGSGGGGGSGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLMDSRGNMEIQWTENFNNNLSNGIPNNFQNNYQTQIMNNNPAVSPQSSLESAANNDEALLFINQIHNFHESQSRSPEESQFLQPFPTKKLPSSHVHDLGELQALALRMMRN 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4615773 4617437 - XM_039032923.1 Bhi05g00243 34453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00243 241 MobiDBLite consensus disorder prediction 202 217 - -
Bhi05g00243 241 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 240 - -
Bhi05g00243 241 ProSiteProfiles LOB domain profile. 25 127 IPR004883 -
Bhi05g00243 241 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 11 240 - -
Bhi05g00243 241 MobiDBLite consensus disorder prediction 1 22 - -
Bhi05g00243 241 Pfam Lateral organ boundaries (LOB) domain 26 124 IPR004883 -
Bhi05g00243 241 MobiDBLite consensus disorder prediction 202 224 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00243 Bhi-Chr5:4615773 Bhi11g02885 Bhi-Chr11:77595502 4.09E-52 dispersed
Bhi05g00242 Bhi-Chr5:4598581 Bhi05g00243 Bhi-Chr5:4615773 1.97E-56 tandem
Bhi05g00243 Bhi-Chr5:4615773 Bhi05g00244 Bhi-Chr5:4623860 5.77E-80 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1098 PF03195 LOB 2.90E-36 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00243 K13944 - csv:101214521 364.385