Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00244 TTCCCCCCCTTTTTTTTAATTCCTATGGCTTCTTCTTCTTCCTCTAGTGTGTCATGCGGTGGCGGTGGCAGTGGCGGTGGCGGTGGTAGTGGCGGGTCGCCTTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTACTTTTGCTCAGAGCAAGGGGCTGCAAGATTTGCTGCCATTCATAAAGTGTTTGGTGCAAGTAATGTTTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGATGTGAAGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTCCAACAACAGGTGAATATCATTTTCTCTTTTGTTATTTCTTTAATTGCTTTAATCATCGCTTTTTAG 417 41.97 MASSSSSSVSCGGGGSGGGGGSGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVNIIFSFVISLIALIIAF 130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4623860 4624276 - XM_039032233.1 Bhi05g00244 34454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00244 130 Pfam Lateral organ boundaries (LOB) domain 26 114 IPR004883 -
Bhi05g00244 130 PANTHER LOB DOMAIN CONTAINING PROTEIN 8 121 - -
Bhi05g00244 130 MobiDBLite consensus disorder prediction 1 22 - -
Bhi05g00244 130 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 8 121 - -
Bhi05g00244 130 ProSiteProfiles LOB domain profile. 25 127 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00244 Bhi-Chr5:4623860 Bhi11g02885 Bhi-Chr11:77595502 1.11E-48 dispersed
Bhi05g00243 Bhi-Chr5:4615773 Bhi05g00244 Bhi-Chr5:4623860 5.77E-80 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1099 PF03195 LOB 3.60E-35 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00244 K13944 - bhj:120078047 226.483