Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00277 AGGTGGGAAAAAGAGAAAAAGAAAAGTAAGAAAGATGGAAACTTTGTAGTTTTTGGCTCTGGCTTCTTCAGGGTGTTGGGTTCTCTTCTCAAGCCAGACAAAAGGAAAAGCAAAAGAAAAAGGAAAAAAAAAAGCAAAAAAGTCTTATTTTTCACACTCAAACCAAAATCATGGAAGTTTTAGTTTAGGGTTTTCAGAAACTTACACGCTCTGTTTTTTGTTGTTTTTTTCTTATATACTTCCTGTCCATTTCTCTCTGTTTTTTGTTTTTCTGTTTTTGTTTCTTACAATTCTTCCAACTTCACCCTTCTGATGATTCCTTCTTGGATTTTAACTGTTTTGTTTCTTCTTTGTAGTGTTGAATTTTTGGGTCTTTTTTGAATTCATTTATCTTTCTTCTTCTTTCTTGGGAGATTTTGGTTTTCAAATGGAAGAGGTTGAAGAAGCTAACAAAGCAGCCATAGAGAGCTGCCATGGAGTTTTGAATCTTTTGATTCAACCTTCTCAAGACCAACTTCATTTCAGAAATTTAATGGTTGAAACTAAAGAAGCTGTTTTCAAGTTCAAGAAAGTGATTTCTCTTTTAAATTCTGGTTTTGGTCATGCAAGAGTTAGAAATTTCAACAAGATTCCTCTCCCTTTGCCTAAAAAATCCCTCTTAGATTCCCTGAATTACACTTCAGATCCTCCAAACAAAAATCTTTACCCTTTCCCCCCTGGTTTGAATGGTAAAGTTTCAATTTTCTTGGGAAACCCAGATTTAGAATTGAGTCCAAATGACAAAAATTCCCTCCAAATTCCCAAACAAACTCCTTCTTTAAACTTCAGCTTCCCTCAACAACAACAACAACAACAACAGAGGATTTTGGCTCATCAGAAACAAATGAAACAGCAAGCTGAAATGATGTTTCTTAGGAATAACAATGGGATGAATCTGAATTTTGATACTTCTAATGGCACATTGACAATGTCATCAGCTAGATCTTTCATTTCTTCATTGAGTATGGATGGCAGCGTCGTCGGCGCCGACAGAAGCTCCTTCCATTTGATCGGACCGTCGATGACCACAACGACGTCGGCCGATAACAAGAGGAAGTTTTCTGCAAGGGGAGATGAAGGGAGCTTGAAATGTGGAAGCACTGGCAAATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATCAAAGTACCTGCCATAAGTAACAAACTTGCAGATATCCCTTCTGATGATTATTCATGGAGAAAATATGGGCAGAAGCCAATTAAAGGTTCTCCTCATCCCAGGGGTTACTACAAATGCAGCAGCATGAGAGGTTGTCCCGCGAGAAAGCATGTCGAGCGGTGCTTAGAAGACCCGTCGATGCTTATTGTAACGTACGAAGGGGAACATAATCACCCGAAAATGTCGACACAATCTGCACACACTTAGCCTACAAGCTCAAATTAACAGGATTGGGAACCTCCAATTTTTATTTTTATTTTTCTATTAATCAAAACCCAGTTTGGGATTGGTGTTGGTGCTTCTTTTGTACATATTTTTGGGGCTCAACATTTGAACCAAGCTCTTGAATTTGGAGAGTTTCCTTTCAAATCAAAAAAGGAAGACAATGAATCCAACATTTGACCCTCAAATTTCTATAGAATAGCTATTGTAAAACTGTAACAGTTTCTTCTTCTTTTGACTAATATTTTCTTCTTTTTATTTTCC 1717 37.22 MEEVEEANKAAIESCHGVLNLLIQPSQDQLHFRNLMVETKEAVFKFKKVISLLNSGFGHARVRNFNKIPLPLPKKSLLDSLNYTSDPPNKNLYPFPPGLNGKVSIFLGNPDLELSPNDKNSLQIPKQTPSLNFSFPQQQQQQQQRILAHQKQMKQQAEMMFLRNNNGMNLNFDTSNGTLTMSSARSFISSLSMDGSVVGADRSSFHLIGPSMTTTTSADNKRKFSARGDEGSLKCGSTGKCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKMSTQSAHT 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5664853 5667244 - XM_039030965.1 Bhi05g00277 34487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00277 336 Pfam Plant zinc cluster domain 232 266 IPR018872 -
Bhi05g00277 336 Pfam WRKY DNA -binding domain 270 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g00277 336 SMART WRKY_cls 268 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g00277 336 SUPERFAMILY WRKY DNA-binding domain 266 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g00277 336 Gene3D WRKY domain 252 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g00277 336 ProSiteProfiles WRKY domain profile. 263 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g00277 336 PANTHER WRKY TRANSCRIPTION FACTOR 74-RELATED 2 336 - -
Bhi05g00277 336 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 336 IPR044810 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00277 Bhi-Chr5:5664853 Bhi09g01143 Bhi-Chr9:26970385 3.75E-128 dispersed
Bhi05g00277 Bhi-Chr5:5664853 Bhi05g00278 Bhi-Chr5:5665256 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1104 PF03106 WRKY 1.10E-26 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00277 - - csv:101214847 564.688