Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00283 TTAAATCCATTTTTTCTTTTCGTTCCTTCATGCTCCTTTTCTACGAAGAGAAACCAAACAAACAAACAAAGTCTCTTATATCTTTTTTTTTCTTTTTTCTTTTTTCATTTCATTTCATCGATTCCAGATCAATCATCTTCAATCTCTTCAATTCCATCAAACCCCACGTCTAATTCCTTCTAATTTCTCATACCCATTTCCAAAATCTTGCTATTAAACACAATCACACTCACACTCACCCCCATTTTCTTTCCCATTTTTCCCATCTCCAAATGCTTCATCTTTCTTCTTCTCATCTCTTGATTCCCTCTTTTCACTGGCTTTCCCTTCTTTGATTCTTTTGTTTCTGAGTCCAATCTCAAATGGGTTTTTGAGATAATGAACGTAAATTTCTCTTATGAACAAATGTTCAACAGGGCATGCAGAGTTGAGGTACGTGGTTGAGGTTTTTGATTCTTTTTGGGGTATGGCGAATCGGGTTGTTAAAGTGAAGAGGGAAGCCATTGCAGCATGCATAACTTGCCCACTTTGTAATAAGCTCTTGAAAGAAGCTACTACCATTTCTGAATGTCTTCATACTTTTTGCAGAAAGTGCATATCTGATAAGATTTCCGATGAGGAACTAGAAAACTGTCCAGTATGTAATATTGACCTCGGGTGCGTCCCACTGGAGAAATTAAGGCCAGACCACAATCTAGAAGATTTAAGGGCCAAGATTTTCCCTAGTAAAAGGAGAAAAGTCAAGACACCCGAAGTTGCTCCTGTTATACTACCACCAGTTAGAAGAAAGGAAAGATCACTTTCCTCATTGGTGGTCAATAGTCCTAGAGTGTCAAGTCATGCTACTGCAACTGGAAGAAGAACAGCAGCTGCTGCGGCAAGAATTGCTTCTATTTTACGAACACCAAGAGTCTCTTCTGAGAAGCGAGTGAAGAAAGAGGATGATTCCGTGGATGACCATTCAGAGAGCTCAAGTTCTCTCGAGACATCAGACAAATTCAATCAGAATAAAAGGCCGGATTCCAGTCCTACCAAGTCTACCATGCCTTTGCGAAATAAAGAAGCCGAAAATGGTGTTAACTCAGTGGAAGGGAACTTGGATATCTGGAAACCTCTAAATTTCTTAGTTGAAGTTGCAAATAGGAGTAAATGTTCCAAATCTAGTTCACAAGGATTTGAAACTAAAGTTGAGCCTGCAGAAGTCGATGGAAGTGAAGCTCAGGCCAGCAAATCTAGAAATAGGGAAGGCAAACGCAAGCAAAAACGTGAGAATGGAAAAACTAGAGCGGACCCAGTATCTCCAGAAACTGAAAAACCTAAGAAACTTCGTAGGGTCCACCAGAAAAGGGAATCTTTTTATGGGGACTCCAGCCTTACACCCCAGGTTGTGTTAGATGCCTCTAGTGCTCGGCATGAAATAAGAGCTGGTCCAATTTGGCTTTCACTCATAGCTTCTGATCAGGAAGGAGATATATCGTTGCCGCAAATTCCTGCTAAGTATTTGAGAATAAATTTTGGTCACAGGGATAGAAACTTGCCAGTATCATTTGTCCAGAAGTACCTTATGAGAAAGCTGGATCTCCCAAGTGAATCAGAGGTTGAAGTCAAGTGTATGGGACATCCAGTAGTCCCCACTCTGGATTTGCATAGTTTAGTTGATTTGTGGCTACAAACAGCCTCAACTTCCGAAAAAATCCCGGCATCGATTGGCTCGTCGGCGGAGGATTTCATTATGGTTCTTTACTATGCTAGAAAGATCATAGTTTCTTGACCTTCAATTTCCTTCATATACATTAATCTGCATCGAAGGGTCTTCACGCAGTTCGCCCTCTGCCTGTCATCTCTTCGGTAGCCTCGCCATGATTCTTGATCAGAGCAAACCGATGCAAAGCCAGTGAAAAGGCCCCGAAATGTTTCTCGAGTATATACCTGATTCCGGGTGCTCAGTTTAAATGACTGCATCAATCCCAGTTGCTCAAAAGCTTCTTAGATTTAAGATTTTGTAATATTTGGAGATAATGATAGAACATTTTAGAGTAAGCTAACAGCTATTATGGGAGTACCATAATACACACTTGAAATTCTTTATACACCCACATCATTAAATAAAGCCAACGACAATCTCCTTTATTTAAAATTAACCATGTGGTGTGGGTGTAATGAAATATTTTAAATGTGTGTTTTGTTTAGGAACTCCCTCAGCAGCTGCTTTTACTTTGTTAAAATATGTACTTGAACAATACCAAATTATCCTCATTATTCTAATAAAGTTTCATATCTCTCTCCACTGATTAA 2295 39.61 MNKCSTGHAELRYVVEVFDSFWGMANRVVKVKREAIAACITCPLCNKLLKEATTISECLHTFCRKCISDKISDEELENCPVCNIDLGCVPLEKLRPDHNLEDLRAKIFPSKRRKVKTPEVAPVILPPVRRKERSLSSLVVNSPRVSSHATATGRRTAAAAARIASILRTPRVSSEKRVKKEDDSVDDHSESSSSLETSDKFNQNKRPDSSPTKSTMPLRNKEAENGVNSVEGNLDIWKPLNFLVEVANRSKCSKSSSQGFETKVEPAEVDGSEAQASKSRNREGKRKQKRENGKTRADPVSPETEKPKKLRRVHQKRESFYGDSSLTPQVVLDASSARHEIRAGPIWLSLIASDQEGDISLPQIPAKYLRINFGHRDRNLPVSFVQKYLMRKLDLPSESEVEVKCMGHPVVPTLDLHSLVDLWLQTASTSEKIPASIGSSAEDFIMVLYYARKIIVS 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5739091 5743856 - XM_039032740.1 Bhi05g00283 34493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00283 457 ProSiteProfiles Zinc finger RING-type profile. 42 83 IPR001841 -
Bhi05g00283 457 MobiDBLite consensus disorder prediction 195 222 - -
Bhi05g00283 457 Pfam Zinc finger, C3HC4 type (RING finger) 42 82 - -
Bhi05g00283 457 SUPERFAMILY RING/U-box 38 107 - -
Bhi05g00283 457 MobiDBLite consensus disorder prediction 135 153 - -
Bhi05g00283 457 MobiDBLite consensus disorder prediction 171 226 - -
Bhi05g00283 457 ProSitePatterns Zinc finger RING-type signature. 58 67 IPR017907 -
Bhi05g00283 457 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 26 453 IPR044807 GO:0004842
Bhi05g00283 457 MobiDBLite consensus disorder prediction 135 156 - -
Bhi05g00283 457 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 132 IPR013083 -
Bhi05g00283 457 MobiDBLite consensus disorder prediction 275 309 - -
Bhi05g00283 457 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 26 453 - -
Bhi05g00283 457 MobiDBLite consensus disorder prediction 172 194 - -
Bhi05g00283 457 SMART ring_2 42 82 IPR001841 -
Bhi05g00283 457 MobiDBLite consensus disorder prediction 251 318 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00283 Bhi-Chr5:5739091 Bhi06g01793 Bhi-Chr6:50160801 2.45E-146 dispersed
Bhi05g00282 Bhi-Chr5:5739091 Bhi05g00283 Bhi-Chr5:5739091 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00283 K16277 - csv:101220692 758.829