Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00313 AATGGTGCTGAAGCTAGTGAGATGGCTTCGAAGATTTTGTTGGAGTATTTTGTTGTGCATACTTATTTTCTTCTTGATGCCACTTACTCTGGAATTTTCAAGAGATCCATTAAGACATCTTCAAATGAGAGGGAACATGGTATCCTCTTTAATCAACTTAGTTGGAGCGACAAAATTAGTAACCGTGATCTGGAACTCGGAAGATTTTGACGATGATTTTCATTTGGAAATTTTGAAAGAAGCACTTATGAGAGCTATACAAGATATTGACAAAACATTTTCCGAGGAAGCACATAAAAATAATCTTGTTTCCGGTTCTACTGCTACTGTTATATTATTAGCAGATGCACAAATTTTGGTAGCGAACATTGGTGACTCAAAGGCTTTCTTGTGCTCTGAAAAATTTCAGTCACCTTCAGAGGCTAAAGCCACCTTTGTAAGGTTATACAAGCAAAAAAGATACAGTGGTGCTTCACGTGCAAGGGGATATGGAAATTCTAGACCAGATTCGTATGATGGGCTGATGCATTTTTATGTCAAAGAATTGACGAGAGATCATCATCCAGATAGAGAGGATGAAAGATCTAGGGTGGAGATTGCTGGGGGTCATGTTGTTGACTGGGGTGGTGTGCCAAGAGTAAATGGTCAGTTGGCTATAACCAGAGCAATTGGTGATGTGTCTTTTAAAAGCTATGGGGTTATATCTGCACCAGAGGTGACTGACTGGCAACCTTTGTCTGCCAACGATAGCTATTTGGTGGCTTCATCTGATGGCATTTTTGAGAAACTGAGCCCACAAGATGTTTGTGACTTGTTGTGGGAAATACACAATGATGGTATGTCAAGTTCTGAACATTCTCCTTCATGCTCATACTCACTGGCGGATTGCATTGTTAGCACTGCCTTTGAACGGGGAAGTATGGATAACATGGCCACTATTGTGGTTCCTTTAAGACCTGCTAGTTCTTCTCGGAGATTTCAGGAGGGGAGCTTTGTTGCACAGAGAGACTCAAGTTTTCCCATATCTGGAATAGAAAATCTTATTAAAGAGCACTCAGGCAAGGGTGTCTCTTCCAGTGCTGTGCAGTTGCAGCATTCTCATCCTGTTATGTCCAAGTTCAACAGATTATTGGTTGAAGGAAGGCACAATAGTCTGGGATGTTTTTATCTGTCTGAGAATCTGGATGAATACAGGGATTATGTGTTGCGAACTCAAAATGAAGAGGAAGAATATTTATGTGATCTACCCCACGCTCTTCCAGAATCCCTCAATCAGCCATATGGTGGATCTGTCAATGTGTACACTGACCAAAGCTTGTGCTTTCATCTTGGAATGATTGGAGCTAAAGATCAGTGCTTTAATCCTGAAGGCTTTGCTAGTTTTATTGGTTTGCTTGAATCAATTCCTTTTCACGATCCTGGTCCAGACAATCAACTATTTGAGCATTCACCACCTGTATTGAGGTATGTGTTGAAGAAAAGGTTTGGTCGTGGTTCCTATGGCGAAGTATGGCTGGCTTTTCACGGGAATTGCCAGGAAGCGTTTAGTGCAGCAGGAGAGAATATTAGTGTTCCGTGCAACTCATCTTTTGGAGACACCAATGCCAGAAATTATAGCAGCTCTTCAAATAGTTCTCAAGCCCATTCTCCAGACGATAACTTGTTTATCATGAAGCGTGTTATGGTTGAAAGAGGTGCTGGAGTCTATTTAAGTGGCTTACGGGAGAAATATTTTGGTGAAATATTTTTGAATGCTTCTACATGCCTTGGAGATGTGTTGTCGACGGGAGCATCAAACTTTGTCTTTGAAGAATCACCACGGGAACCTAAAGATTTATTGACAAAGGATGAATCACTGGGTTATACAGTAGGGGAAACTAGGCATTTTAAAAATATTTCTCTGAATTGGTTTAGACCAAGGAGAGTAATCTATGAAGAAGGTTTAAATCATATTGTGAGATATGTAGAATCTTTTGAATCTCGGTCTAATGAAATATGGCTGGTATTTCATTATGAAGGGACGTCCCTCTCGAAGCTCATATATTCTGTTGAAAATGCTGATGAAGAAAAAGTTGAGCAAAAAAACCATGTTCAAATATTACGACCTTCTAAGTGGTGGCGTTGGTTGAAAACAACAGAAGCAGGACAAGAGGAGATGAAAAATTTGATACGTCAGTTGTTGATGGCACTCAAGTCTTGTCATGACCGCAATATCACTCACAGGGATATTAAACCTGAGAACATGGTGATATGCTTTGAAGATCAGGCTACTGGAAAATGCTTGAATGGAAGTCAAAGGGGAGATGAGAACTTCTCTACTAAAATGCGCATTATTGACTTCGGTAGTGCTATTGATGAATTCACAGTTAAGCATCTTTATGGATCTATGGGGCCTTCTAGAGCAGAACAGACTTATGATTACACACCTCCTGAAGCCTTGCTTAATTCAAGTTGGTATCAGGAGATGTCTAGTGCTACATTGAAGTATGATATGTGGAGCGTTGGTGTAGTGATGCTAGAATTGATCTTAGGATCACCCAACGTTTTTCAGGTAAGTGATTTAACCCGCGTTCTCTTGGACCAGCATCTTCAAGGCTGGAATGAAGGCGTAAAGCAGCTAGCATACAAGCTTAGGTCGTTTATGGAGTTGTGCATTTTAATTCCTGGGATTTCCTCAAGAAGTTATAAAAAAAATGGTCATCATGGAGGTTCACCAGCATCTTGGAAATGCTCTGAAGAAGTTTTTGCTCACCAAATAAAGCGTAGAGATCCGCTTAAACTAGGGTTTCCAAATGTTTGGGCTCTACGATTGGTCCGCAATCTACTACAATGGAATCCAGAGGACCGTTTAAATGTTGACGATGCTTTGCAACATCCTTACTTCCACCCTTCTCCTAAAGGAGGATGAGTTTGCGGTTTGAGAGATGTTATTACATAGATTAGTTATTCTTCCACCAAAGGTTTTGTTGCCGACAATCAGAAGCTCGATTGATGCATTTTTTTATTCTTCTGAATACGAGTACCTGATACGAGTTGGATGGAGCTTATTCAGAGGCCCTGTCTAGCGCCAATTATTGCCAGGCTTACGATTCTTTGAGTAATGTAATCAACCATACCGATGATGTTTTCTAGACCAAGGTTCGAGATGCTCTGCTGATGTTGTACTAATAGCTTATTTATGTAACGAACGATAATATAAAATGAGATCACTCCCTGAAACTATTGAACCAAAAACCTCACTGTTCGTGAAAGGATTACCAGTCGCTTCAGGAGTTTGTGTTGTTCCCTCCTTTCAAGGATAAGGGGGAAGTTCTTTGACATGTTTGTATGCTTACGATTTTGTGGTGCGTTGAGGGCATCTCCAGACTTGAATGTTCTTTGGGATAAATATTAGATTTAATACATAATACTTTCCAACGGAA 3422 40.33 MVLKLVRWLRRFCWSILLCILIFFLMPLTLEFSRDPLRHLQMRGNMVSSLINLVGATKLVTVIWNSEDFDDDFHLEILKEALMRAIQDIDKTFSEEAHKNNLVSGSTATVILLADAQILVANIGDSKAFLCSEKFQSPSEAKATFVRLYKQKRYSGASRARGYGNSRPDSYDGLMHFYVKELTRDHHPDREDERSRVEIAGGHVVDWGGVPRVNGQLAITRAIGDVSFKSYGVISAPEVTDWQPLSANDSYLVASSDGIFEKLSPQDVCDLLWEIHNDGMSSSEHSPSCSYSLADCIVSTAFERGSMDNMATIVVPLRPASSSRRFQEGSFVAQRDSSFPISGIENLIKEHSGKGVSSSAVQLQHSHPVMSKFNRLLVEGRHNSLGCFYLSENLDEYRDYVLRTQNEEEEYLCDLPHALPESLNQPYGGSVNVYTDQSLCFHLGMIGAKDQCFNPEGFASFIGLLESIPFHDPGPDNQLFEHSPPVLRYVLKKRFGRGSYGEVWLAFHGNCQEAFSAAGENISVPCNSSFGDTNARNYSSSSNSSQAHSPDDNLFIMKRVMVERGAGVYLSGLREKYFGEIFLNASTCLGDVLSTGASNFVFEESPREPKDLLTKDESLGYTVGETRHFKNISLNWFRPRRVIYEEGLNHIVRYVESFESRSNEIWLVFHYEGTSLSKLIYSVENADEEKVEQKNHVQILRPSKWWRWLKTTEAGQEEMKNLIRQLLMALKSCHDRNITHRDIKPENMVICFEDQATGKCLNGSQRGDENFSTKMRIIDFGSAIDEFTVKHLYGSMGPSRAEQTYDYTPPEALLNSSWYQEMSSATLKYDMWSVGVVMLELILGSPNVFQVSDLTRVLLDQHLQGWNEGVKQLAYKLRSFMELCILIPGISSRSYKKNGHHGGSPASWKCSEEVFAHQIKRRDPLKLGFPNVWALRLVRNLLQWNPEDRLNVDDALQHPYFHPSPKGG 968
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6159336 6189398 + XM_039031695.1 Bhi05g00313 34523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00313 968 SMART serkin_6 489 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g00313 968 PANTHER PROTEIN PHOSPHATASE 2C 337 966 - -
Bhi05g00313 968 SUPERFAMILY Protein kinase-like (PK-like) 488 963 IPR011009 -
Bhi05g00313 968 ProSiteProfiles PPM-type phosphatase domain profile. 1 317 IPR001932 -
Bhi05g00313 968 Pfam Protein kinase domain 649 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g00313 968 Gene3D Transferase(Phosphotransferase) domain 1 693 962 - -
Bhi05g00313 968 SUPERFAMILY PP2C-like 63 318 IPR036457 -
Bhi05g00313 968 ProSiteProfiles Protein kinase domain profile. 489 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g00313 968 Pfam Protein phosphatase 2C 56 310 IPR001932 -
Bhi05g00313 968 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Bhi05g00313 968 CDD PP2Cc 59 317 IPR001932 -
Bhi05g00313 968 SMART PP2C_4 27 315 IPR001932 -
Bhi05g00313 968 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 337 966 - -
Bhi05g00313 968 Gene3D - 45 324 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00311 Bhi-Chr5:6158527 Bhi05g00313 Bhi-Chr5:6159336 0 dispersed
Bhi05g00313 Bhi-Chr5:6159336 Bhi04g01480 Bhi-Chr4:36821451 1.15E-20 dispersed
Bhi05g00312 Bhi-Chr5:6158527 Bhi05g00313 Bhi-Chr5:6159336 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87743 PF00069 Pkinase 2.70E-27 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00313 - - csv:101210198 1576.61