Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00438 AAATAAAAAGGAAACAAAAGAAAATAGAGTTGGACATGTTCTGCAGAAAACAGTGAAAAACGTCACCGACGACGTACGTCGAGGTTCGAACCCCGGACTCTGCTCCGTGGTCTCTCCTTTCCCTTCCCTCGTCTCCGATTACTCTCTCTCTCCAGGTCTTCAAGCTTCAAGCTCCAGCAATTTCTGTATCGACGAAATTCGATGTTTTGAATCTTTGGTGGAAGGTGGCGTCTGTTTGATATAGAATCATGGGTGGCAGTGAGATGAATAAGTCCACGAAGGAGGAATCCAAGACAACACCTGCCACTACGCAGTTTTGCCTTTTTTTCAGGAACAGTCTCCAAACACAAGCACTGGCACTGTTAATCCTGAATGGTCAGGATTTCAGGTTCTTTTTGTTAAAGCCTCAAGCATATTCTCCAATACCTCCACCTGGATATTTGGCAACAAGCCCCCAGGCACACCCATATATGTGGGGGGTACAGCCTATTATGCCGCCTTATGGAACCCCTCCACATCCGTATGTTGCAATGTATCCTCATGGTGGCATATATGCTCATCCGCCTATGCCTCCGGGATCATATCCTTACAGTCCTTTTGCTATAGCTTCTCCAAATGGCATCGCTGAGGCTTCTGGGAATACACCAGGCAACATGGAAGGAGAAGGTAAGCCATCTGAGCTGAAAGAAAAATTGCCAATTAAAAGATCAAAAGGAAGTCTGGGAAGTCTAAGCATGATAACTGGGAAGAACAATGAGCTTGGTAAACCATCAGGAACATCTGCTAACGGAGTTTATTCTAAAAGTGCTGAAAGTGAAAGTGAAGGTACGAGTGAAAGAAGTGGTGCTGATTCTGAAAATGATTCACAACTAAAATCTGGTTCTGGGAAAGATTCTTTAGAAGGTGGAGGGACTCCTAATGGTTTGATGCATGGTTCTCAGAATGAAGGACATAGTCTTGCGCATCCATTGGTGAACCAGACGATGTCCATGATACCAATTCAAGCTTCTGGAGCTGTTACAGGTCCTGCTACAAATTTGAATATAGGAATGGATTATTGGGGTACCCCAACAACTTCTGCCATCCCTTCATTGTGTGGGAAGGTCCCTCCGGCTCCGATTGCAGGAGCTGTTGCTGCTGGGTCACGAGAAGGCATTCCGCCACAGCCTTGGTTACAGGATGAAAGAGAGCTGAAAAGACAAAGAAGGAAGCAGTCAAACAGAGAATCTGCTCGTAGATCTCGGTTGCGTAAACAGGCTGAATGCGACGAGCTGTCTCAGCGCGCTGAAGCTTTGAAGGAAGAAAATGCGAGTCTTAGATCTGAAGTGGATAGGATTAGGAGTGAGTACGAGCAACTTCTTTCAGAAAATGCCTCTCTCAAGAGGAGGCTTGGAGATAATGGTGGAAATGAAGATCCAAGATCTGCCAAAGACGGCCAAAATTTTAATAAAGAAGGTCACCATACATCCCGGACCCAACTCACCAAAGGGTAATTAGGATATGTCGTACATCCCAGACCCGACTCGCTAAGGGGTAATTAGGATCTACCATCCTTGCTTAATTCATCTGCAGTCACATAACCTAACCAGTTAGTAGCCAAAAAGTTTGGATAACTTAAAACATTTTCTAAGAAACTGACTCGTGTCGTCTCGGGACAGTTGATTCTTATGGATGCTGTCTTTAACCCGAAGCTCTGTGTAGTATCCTTGTATCCAAATTTGATGAGTGTCATGCAACATTTCATTTGAGTTTTTTCAGTGTAAAATATATTTTTGTGCCAAGTTGAGGTCGAAATCGAGGCATTTTGGTATGCTTTTTAACAGTTTGATTTGA 1833 44.19 MGGSEMNKSTKEESKTTPATTQFCLFFRNSLQTQALALLILNGQDFRFFLLKPQAYSPIPPPGYLATSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPHGGIYAHPPMPPGSYPYSPFAIASPNGIAEASGNTPGNMEGEGKPSELKEKLPIKRSKGSLGSLSMITGKNNELGKPSGTSANGVYSKSAESESEGTSERSGADSENDSQLKSGSGKDSLEGGGTPNGLMHGSQNEGHSLAHPLVNQTMSMIPIQASGAVTGPATNLNIGMDYWGTPTTSAIPSLCGKVPPAPIAGAVAAGSREGIPPQPWLQDERELKRQRRKQSNRESARRSRLRKQAECDELSQRAEALKEENASLRSEVDRIRSEYEQLLSENASLKRRLGDNGGNEDPRSAKDGQNFNKEGHHTSRTQLTKG 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9230617 9238743 + XM_039032222.1 Bhi05g00438 34648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00438 414 MobiDBLite consensus disorder prediction 372 414 - -
Bhi05g00438 414 CDD bZIP_plant_GBF1 317 367 IPR045314 GO:0003700|GO:0006355
Bhi05g00438 414 Pfam Disordered region downstream of MFMR 147 280 - -
Bhi05g00438 414 MobiDBLite consensus disorder prediction 125 236 - -
Bhi05g00438 414 SUPERFAMILY Leucine zipper domain 315 371 IPR046347 GO:0003700|GO:0006355
Bhi05g00438 414 Pfam bZIP transcription factor 312 374 IPR004827 GO:0003700|GO:0006355
Bhi05g00438 414 SMART brlzneu 312 376 IPR004827 GO:0003700|GO:0006355
Bhi05g00438 414 MobiDBLite consensus disorder prediction 382 414 - -
Bhi05g00438 414 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 319 334 IPR004827 GO:0003700|GO:0006355
Bhi05g00438 414 MobiDBLite consensus disorder prediction 158 189 - -
Bhi05g00438 414 PANTHER BZIP TRANSCRIPTION FACTOR 68 1 409 - -
Bhi05g00438 414 Gene3D - 315 369 - -
Bhi05g00438 414 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 314 377 IPR004827 GO:0003700|GO:0006355
Bhi05g00438 414 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 409 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bhi05g00438 414 MobiDBLite consensus disorder prediction 298 340 - -
Bhi05g00438 414 Coils Coil 325 380 - -
Bhi05g00438 414 Pfam G-box binding protein MFMR 1 108 IPR012900 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00438 Bhi-Chr5:9230617 Bhi05g00440 Bhi-Chr5:9232758 0 dispersed
Bhi05g00437 Bhi-Chr5:9230617 Bhi05g00438 Bhi-Chr5:9230617 0 tandem
Bhi05g00438 Bhi-Chr5:9230617 Bhi05g00439 Bhi-Chr5:9230617 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1116 PF16596 MFMR_assoc 5.90E-45 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00438 K09060 - csv:101214217 703.745