Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00458 TTTTTGCAAGATGGGAACATTTTAGAGAGAGAGAGAGAAAAAAAAACTATGTGGGTGTCTTTAGTTACTTATTTGTAGCTCTAAATTTTAAGAGAAATTTCTTCTCTTCTTTTTCTTCTTCTTCTTCTTCTTTCTTGGCTTCTTCTTCTTCCTCTTAGGTTGTCTTTGTTTCTTTGTTTATACATTAGAAACCACCGACAGTGGAGAGACAAAAGATAGGTGGGTGTGGTCTAAAATCCAAGTGTTGTTGTTGTTATATAATAATATATTAGCTCTTTTGGTGTTTCTTGAGCAATATATATTATTATATAACAAAATAATAATAATTTAGGGGAAAGTAAAAAAAAAAAAAAGAAGAATGTATGGGGATTGCCAAGTGATGTCAAACAATATGGGAGGAAATATGGTTTCCTCTGAATCTCTCTTTTCTTCTCCAATTCAAAACCCTAATTTCAATTTCATCTCTAATTTTCAACACTTTCCTTCCATTGTACCTAAGGAAGAAAATGGGTTGATGATGAGAGGGAAAGAGGATATGGAAAGTGGTTCTGGAAGTGAACAACTTGTTGAAGAAAATCAAGGAATTGAAATGGAAAGTAATATTAATAATGATAATATTATTCAGCAAAATCAGAAGAAAAAACGCTATCATAGACATACTGCTCGCCAGATCCAAGAAATGGAAGCATTATTTAAGGAATGCCCACACCCAGATGACAAGCAGAGGCTAAAACTCAGCCAAGAACTTGGCCTCAAACCTCGCCAAGTCAAATTTTGGTTCCAAAATCGAAGAACCCAAATGAAGGCACAACAAGATAGATCTGATAATGTGATACTTAGGGCAGAAAATGAGACCTTAAAGAATGAGAATTATAGATTACAAACTGCCCTGAGAAACATCATATGCCCTAGCTGTGGAGGCCAGGGTATCTTAGGGGAACCAAGCTTGGATGAACAACAGCTTCGCCTTGAGAATGCTAGACTTAGAGATCAGTTAGAACAAGTTTGCTCTTTAACCACAAGATACACTGGTCGTCCAATCCAAGGGATGCCCTCCACAGCTCCTCTTTTGCAACCATCTTTGGATTTGGACATGAACATATACTCAAGGCAATACACGGAGGCCATGGTTTCGTCCTCCGAAATGATGTCGTTGCCCTCGATGCTCCCACCCGAGGCTGCTCACTTTCCGGAGGGTGGTCTATTAATTGAAGAGGAAAAAACACTTGCGATGGACCTTGCCGTTTCATCTATAGCTGAACTTGTGAAGATGTGTCGCTCGACCGAGCCTCTTTGGGTTCGAGATAGCGAGAGTGGTAAGGAAGTTCTAAATGTTGAAGAGCATGGGAGGATGTTTCCATGGCCATTGAACCTCAAGCAACACTTGACCAACGAGTTTAGGACTGAAGCCACCCGCGATAGCGCAGTTGTTATAATGAATAGCATCACTCTCGTCGACGCCTTTCTCGATGCTAACAAATGGATGGAATTGTTTCCTTCAATTGTGGCCAAAGCAAAGACTGTGCAAGTCATTTCATCAAGTGTTTCAGGCCATGCCAATTCTTCCCTTCAGCTGATGTATGCAGAACTTCAGACACTTTCTCCTCTAGTCCCGACGAGAGAAGCACATTTTCTCCGGTGCTGCCAACAGAACGCCGACGAAGGAAGCTGGACCGTCGTTGATTTTCCAATCGATAGCTTCCATGACAGTCTTCAGCACTCGTTTCCAAGATACAGGAGAAAGCCCTCTGGCTGCATTATTCAAGACATGCCCAATGGATATTCTAGGGTTACATGGGTGGAGCATGCAGAGATAGAAGAGAAGCCAATCCATCAAATATTCAATCATTTTGTGCATAGTGGAATGGCTTTTGGGGCACATCGTTGGTTGGCTATTTTACAAAGACAATGTGAGAGAATTGCAAGTCTCATGGCTAGAAATATTTCTGACCTTGGAGTAATACCTTCACCTGAAGCAAGACAAAACCTAATGAAACTAGCACAAAGAATGATCAGAACTTTCTCAGTCAACATAAGCACCTCCGGCGGTCAGTCGTGGACGGCATTATCTGATTCTCCTGATGATACTGTCCGTATAACCACTCGAAAAGTCGTCGAGCCTGGCCAACCCAATGGGGTTATTCTTAGCGCTGTCTCCACTACTTGGCTTCCTTATCCTCACTATCGAGTGTTCGATCTTCTGCGAGACGAACGGCGGCGGTCTCAGCTGGAGGTTCTCTCAAATGGGAATTCCTTGCATGAGGTTGCTCACATTGCCAATGGCTCCCACCCCGGAAACTGCATTTCTCTTCTTCGTATCAATGTGGCCAGTAACTCCTCCCAGCATGTTGAGCTGATGCTGCAGGAGAGTTGCACGGACCAATCCGGCAATCTCGTCGTCTATGCGACAATTGACGTCGATTCGATTCAGTTAGCAATGAGTGGAGAAGATCCATCTTGCATTCCTCTCCTCCCCATAGGATTTTCCATCGTCCCCGTCGTCGGGTCAACCGTCGACGGACACCTAGCACCACCATCTGAGGACGGTACTGCCAATCCCAATTCGGGTTGCCTCCTTACCGTTGGCTTGCAAGTGCTAGCCAGCACCATTCCGTCAGCAAAGCTCAACCTGTCAAGCGTAACTGCCATCAACAACCACCTTTGTAACACGGTGCACCAAATCAACGTCGCTCTTGGCGGTCCAAGTCGTCTCGAGAATGGCAATGGCGGGGGCGAGGCGAATAATCCACCGCCGCCGCCCAAGCAATAAGCTTGGTAGGTGCAATATACAAGCACCTTAAGCATGGTAGGCAAAGAATGAAATGAAGTGAGCTGCCAATTACCCAAAATCTCCCTCCCTCAATGCCACCCTTGACGTAGATTACAAGGGCATTATCGGTAACTTGAAAAGGATAAGTAGGGTTTTTGAGTGGGAGATTGTGGATAATTGGTAGAGAAAAAAGAGAGAGAGAGAAGGTAAATTTAGTTTTAAAAAGTGTAATTATTAATTAATTAAAAATATATAGGAGTAGTTTTTGGAGGGTAAATAAGAGAGAGAGAGAGATTAGGGGTAAATTTGATGTGTGGTTGTGGATTAGGGTGTAGGGTATGTTGTGGAAGTCAAGAACGCACCAGATAAAACCCTTGGGGTCTCTGACAAGGCTGTCAGAAAGTGGGGCCTTGTCCAGTCAGCAAGGGTGGTGGTTCGGGCATTGACTTCTTCTGCTTAATTATGTGTCAGTCAGACGGCGTCGTTTCGCCTTGCCTTTTTTTTTTTTTTTTTCAATTCTTATTTTTATTATTAAGATGAATTATTATTATGACTCTGAATTTAATGCTTCCAATCAATTTGCCTTTCCTACC 3363 43.0 MYGDCQVMSNNMGGNMVSSESLFSSPIQNPNFNFISNFQHFPSIVPKEENGLMMRGKEDMESGSGSEQLVEENQGIEMESNINNDNIIQQNQKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENETLKNENYRLQTALRNIICPSCGGQGILGEPSLDEQQLRLENARLRDQLEQVCSLTTRYTGRPIQGMPSTAPLLQPSLDLDMNIYSRQYTEAMVSSSEMMSLPSMLPPEAAHFPEGGLLIEEEKTLAMDLAVSSIAELVKMCRSTEPLWVRDSESGKEVLNVEEHGRMFPWPLNLKQHLTNEFRTEATRDSAVVIMNSITLVDAFLDANKWMELFPSIVAKAKTVQVISSSVSGHANSSLQLMYAELQTLSPLVPTREAHFLRCCQQNADEGSWTVVDFPIDSFHDSLQHSFPRYRRKPSGCIIQDMPNGYSRVTWVEHAEIEEKPIHQIFNHFVHSGMAFGAHRWLAILQRQCERIASLMARNISDLGVIPSPEARQNLMKLAQRMIRTFSVNISTSGGQSWTALSDSPDDTVRITTRKVVEPGQPNGVILSAVSTTWLPYPHYRVFDLLRDERRRSQLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGNLVVYATIDVDSIQLAMSGEDPSCIPLLPIGFSIVPVVGSTVDGHLAPPSEDGTANPNSGCLLTVGLQVLASTIPSAKLNLSSVTAINNHLCNTVHQINVALGGPSRLENGNGGGEANNPPPPPKQ 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9729948 9738362 - XM_039032864.1 Bhi05g00458 34668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00458 803 Coils Coil 150 170 - -
Bhi05g00458 803 SMART HOX_1 92 155 IPR001356 GO:0003677
Bhi05g00458 803 SUPERFAMILY Bet v1-like 286 522 - -
Bhi05g00458 803 ProSitePatterns 'Homeobox' domain signature. 126 149 IPR017970 GO:0000981|GO:0006355
Bhi05g00458 803 CDD homeodomain 94 152 IPR001356 GO:0003677
Bhi05g00458 803 ProSiteProfiles START domain profile. 284 523 IPR002913 GO:0008289
Bhi05g00458 803 SMART START_1 293 520 IPR002913 GO:0008289
Bhi05g00458 803 Gene3D - 81 162 - -
Bhi05g00458 803 Gene3D - 329 518 IPR023393 -
Bhi05g00458 803 ProSiteProfiles 'Homeobox' domain profile. 91 151 IPR001356 GO:0003677
Bhi05g00458 803 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 46 785 IPR042160 -
Bhi05g00458 803 SUPERFAMILY Homeodomain-like 83 152 IPR009057 -
Bhi05g00458 803 Pfam START domain 295 520 IPR002913 GO:0008289
Bhi05g00458 803 MobiDBLite consensus disorder prediction 780 803 - -
Bhi05g00458 803 CDD START_ArGLABRA2_like 288 519 - -
Bhi05g00458 803 PANTHER - 46 785 - -
Bhi05g00458 803 Pfam Homeodomain 94 149 IPR001356 GO:0003677
Bhi05g00458 803 SUPERFAMILY Bet v1-like 557 775 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00458 Bhi-Chr5:9729948 Bhi08g01980 Bhi-Chr8:57139252 0 dispersed
Bhi05g00457 Bhi-Chr5:9729948 Bhi05g00458 Bhi-Chr5:9729948 0 tandem
Bhi05g00458 Bhi-Chr5:9729948 Bhi05g00459 Bhi-Chr5:9729948 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1128 PF01852 START 1.90E-44 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00458 - - csv:101212772 1498.41