Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00466 ATTTTCATATTTATTGAACTATTTTGGTTTGGAAAATATCGCACTCAATCGATTTCACGTCATTCTTGAATGATGCTGATGCAACCAACAATCAACGAGAATAGTTAACTTTGTTTTTTTCACTTTTTTTTTGTATTTTTTGTCGCTAATTAAATGGGGTTAAGTTATCAAATAATAATACCATCTAACTTTTTCGTTTGTTTAAAAATACCCATCTTCTTTTTAAAGTTGCAATTTTGATAATTTGTCTTTGACCTTTTATGAATGTTTCAAAACTATTATTGGAGTTGGATGATAATTTTGACCGAAAATGGTGTGATAATGACCTAGAATAGGTGACGATCAAATTTTTTGTTTCAGGTCCTCATCACACTGTTTTAAATATTGATTTCATATGATATTCTAAAGTATTTATAATATTTTAATGGTAATTTTGAAATATTTATTAAAAGTCAAACTATAATATTGTAACTTATCTAAAGTTTAAATATATAATTATAACCAAATAGTTGGGGAAAAGATAATTACACATTCTATTTAATTTTCATGTTTATATTTCGACAAGCTTAGTTTCTTTGAAGTTATAATGATGAAATCCTACACCAACCATTGCTATTTTGAATTTTCCTCACCAGATTTTTTTCTATATTTTGGACCAAATAATAATAACTCCTATTAAAATAAAGAATATAAAAGCAATAAGAAATATATAATTATTGCATGGCATTATTATTATTAAAATAATTTTGGAGAGGGATAAACATTTATACAAATTTAATGCAATTACAGATGGATGGAAAGTGTATTTATATTTGACATAAAAAAGAAAATAGAGTTTTGAATGAATCTGACATTTCCTTTTTATCATGCTTTGATAAAAGACTATGGAGTAAATGCAATGGTTGAGAACATTAAATAAGTCGCCGCTGAGTTTGGTAGGGAACTTTTTGCATTATATAAGCAGGTTTATATCAGGGTTTATCATTGGATTTGTGAGGGTATGGCAAATCAGTCTTGTCACATTATCTATTGTTCCTTTGATTGCACTTGCTGGTGGTCTCTATGCTTTTGTCACCATTGGTCTTATTGCGAAAGTAAGAAAATCCTATGTCAAGGCTGGTGAGATTGCTGAAGAGATTCTAGGAAATGTAAGAACAGTTCAAGCATTTGCTGGGGAAGAAAGAGCAGTAAATTTATACAAAGGAGCTCTCAAGAATACCTACAAGTATGGTAGAAAAGCAGGGCTGGCTAAGGGACTGGGCCTGGGATCAATGCATTGTGTTCTTTTCTTGTCATGGGCTCTGCTAGTTTGGTTTACCAGCATTGTTGTTCACAAGGGCATTGCCAATGGTGGAGACTCCTTCACCACAATGCTTAATGTTGTCATTTCTGGCCTGTCACTTGGGCAGGCTGCACCAGATATTTCCGCCTTTGTTCGAGCAAAGGCAGCAGCATATCCTATTTTTCAGATGATAGAGAGGAACACAGTAAGCAAAAGCAGCTCCAAAACTGGCCGGAAACTGAACAAGCTTGAGGGTCATATTCAATTCAAGGATGTTAATTTCAGCTACCCATCTCGTTTGGATGTAATTATATTTAATAAGTTATCTCTTGATATTCCTGCGGGCAAGATTGTAGCTCTTGTGGGAGGAAGTGGATCAGGAAAGAGCACGGTGATATCTTTGATCGAACGATTCTATGAACCCCTTTCTGGAGAGATTCTATTAGATGGTAATAACATCAAGGAACTGGATCTCAAGTGGCTTAGGCAGCAAATTGGTTTGGTCAATCAAGAGCCTGCTCTCTTTGCTACAAGCATTAGGGAGAACATTCTATATGGAAAAGATGATGCTACCCTCGAGGACATAACACGTGCAGCGAAACTTTCTGAGGCTTTATCATTTATAAACAATCTCCCTGAAAGATTTGAAACTCAGGTTGGTGAGAGAGGGGTCCAATTATCAGGGGGACAAAAACAAAGGATTGCAATATCTCGTGCAGTCGTTAAAAATCCATCAATCTTGTTGTTGGACGAGGCAACAAGTGCACTAGATGCAGAATCTGAAAAGAGTGTTCAAGAGGCACTCGATCGAGTCATGGTTGGTCGAACGACTGTAGTGGTGGCTCATCGTCTATCTACCATAAGGAATGCAGATGTGATTGCTGTCGTTCAAGAGGGGAAGATAGTCGAAACCGGAAGCCATGATGAGCTCATTTCAAAGCCGGACAGTGTCTATGCATCTCTTGTCCAATTCCAAGAAACAGCATCTCTACAACGCCATCCCTCGATTGGACAGTTGGGTCGACACCCTAGTATAAAGTACTCTCGAGAATTATCTCGCACTACAACGAGCTTTGGTGCAAGTTTTCGCTCTGAGAAAGAATCTCTTGGACGGATTGGAGTTGATGGAATGGAAATGGAGAAACCAAGGCATGTTTCAGCAAGAAGACTTTACTCCATGGTTGGACCGGATTGGATGTATGGAATTGTCGGCGTCATTGGAGCATTTGTTACTGGATCCCAGATGCCCCTTTTTGCTCTTGGAGTCTCTCAGGCTCTTGTTGCTTTTTACATGGACTGGAATACAACTCAACATGAGATCAAGAAAATTTCTCTGCTTTTCTGTGGCGGTGCAGTTTTAACTGTCATTTTTCATGCACTTGAGCATCTTTGTTTTGGAATCATGGGAGAGCGACTTACTCTTCGAGTTCGAGAAATGATGTTCCATGCTATTTTGAGAAATGAGATAGGATGGTTCGATGATATGAACAACACAAGTGCTATGCTTTCATCACGTCTAGAAACTGATGCAACTTTGTTACGAACTATCGTTGTCGACCGCTCTACAATTCTTCTGCAGAATCTAGCTTTGGTCGTTGCGTCTTTCATCATTTCTTTCATATTGAATTGGAGAATCACTCTAGTTGTCTTGGCCACTTATCCATTGATCATTAGCGGTCACATTAGCGAGAAACTTTTTATGCAAGGCTACGGTGGAAATTTGAGCAAAGCATACTTGAAAGCCAATACACTGGCTGGTGAGGCAGTTGGCAACATTAGAACTGTTGCTGCATTTTGTTCTGAGCAGAAGGTCCTTGATCTATATGCTAGGGAGCTTGTTGAGCCCTCGAGACGTTCACTTAAACGTGGACAGATTGCTGGAATATTCTATGGTGTCTCCCAGTTCTTCATCTTTTCATCTTATGGTCTGGCCTTATGGTATGGTTCGGTCTTGATGGGACAGGGGCTTGCTAGCTTCAAATCTGTTATGAAAGCATTCATGGTTTTGATAGTAACTGCCTTGGCAATGGGTGAAACTTTGGCACTGGCCCCTGACCTTTTAAAGGGAAACCAGATGGTGGCATCAGTGTTTGAGGTGATGGACCGACAGACGGAGGTGTCGAGTGATGTCGGTGAAGAGCTAAATGTGGTGGAGGGTACCATTGAGCTGAGAAGTGTTGAGTTCAGCTATCCATCAAGACCAGATGTTTTGATCTTCAAAGATTTCAACCTTAAAGTGAGAGCAGGCAAGAGTATAGCCTTAGTTGGGCAAAGCGGTTCAGGGAAAAGCTCGGTTCTAGCTCTTATACTGCGATTTTATGATCCAATTGCTGGAAAGGTGATGATTGATGGAAAAGATATTAAAAAACTGAAGATCAAATCTCTCAGAAAGCACATTGGCCTTGTCCAACAAGAACCGGCTCTTTTTGCCACGTCAATTTATGAGAACATTCTTTACGGGAAAGAAGGAGCTTCAGAAGCCGAAGTATTTGAAGCAGCGAAACTCGCCAATGCTCATAACTTCATCAGTGCTCTTCCTGAAGGCTACTCAACAAAAGTTGGTGAAAGAGGGATCCAACTTTCGGGTGGCCAACGACAAAGGATAGCCATTGCAAGAGCAGTCCTCAAGAACCCGGAAATACTACTACTCGATGAAGCCACGAGCGCTCTTGATGTTGAATCGGAACGTGTGGTTCAGCAAGCCTTAGACAGATTGATGATGAACAGAACAACTGTGGTGGTTGCACATAGGCTTTCCACCATTAAAAATTGTGACCAAATCTCAGTGATCCAAGATGGTAAGATAGTGGAACAAGGGACTCATTCAAGCCTTTCTGAGAACAAAAATGGAGCTTATTACAAGTTAATCAACATCCAACAACAGCAACAAAGACAGTGATCATATGTTACATAGGACAACCAAATCATATGTTACATAGGACAACCAACTCTTGTTAAAACATTTTCTATTGGGTGCTTAATATTCACTTTTATTTTACACCCTCATATTTATTTATTTATTGAACATTTATGTCCACTTTATGTACATTGAAGTGCTTGTTAATCTCTGATAATAAAGGATAATACATAATAGAGAATGGCTTCAAACACCTTATACA 4401 38.58 MQWLRTLNKSPLSLVGNFLHYISRFISGFIIGFVRVWQISLVTLSIVPLIALAGGLYAFVTIGLIAKVRKSYVKAGEIAEEILGNVRTVQAFAGEERAVNLYKGALKNTYKYGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSIVVHKGIANGGDSFTTMLNVVISGLSLGQAAPDISAFVRAKAAAYPIFQMIERNTVSKSSSKTGRKLNKLEGHIQFKDVNFSYPSRLDVIIFNKLSLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKELDLKWLRQQIGLVNQEPALFATSIRENILYGKDDATLEDITRAAKLSEALSFINNLPERFETQVGERGVQLSGGQKQRIAISRAVVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQEGKIVETGSHDELISKPDSVYASLVQFQETASLQRHPSIGQLGRHPSIKYSRELSRTTTSFGASFRSEKESLGRIGVDGMEMEKPRHVSARRLYSMVGPDWMYGIVGVIGAFVTGSQMPLFALGVSQALVAFYMDWNTTQHEIKKISLLFCGGAVLTVIFHALEHLCFGIMGERLTLRVREMMFHAILRNEIGWFDDMNNTSAMLSSRLETDATLLRTIVVDRSTILLQNLALVVASFIISFILNWRITLVVLATYPLIISGHISEKLFMQGYGGNLSKAYLKANTLAGEAVGNIRTVAAFCSEQKVLDLYARELVEPSRRSLKRGQIAGIFYGVSQFFIFSSYGLALWYGSVLMGQGLASFKSVMKAFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRQTEVSSDVGEELNVVEGTIELRSVEFSYPSRPDVLIFKDFNLKVRAGKSIALVGQSGSGKSSVLALILRFYDPIAGKVMIDGKDIKKLKIKSLRKHIGLVQQEPALFATSIYENILYGKEGASEAEVFEAAKLANAHNFISALPEGYSTKVGERGIQLSGGQRQRIAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMMNRTTVVVAHRLSTIKNCDQISVIQDGKIVEQGTHSSLSENKNGAYYKLINIQQQQQRQ 1095
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9878382 9885773 - XM_039033116.1 Bhi05g00466 34676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00466 1095 Pfam ABC transporter transmembrane region 15 165 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bhi05g00466 1095 Pfam ABC transporter transmembrane region 532 804 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bhi05g00466 1095 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 15 1090 IPR039421 -
Bhi05g00466 1095 SUPERFAMILY ABC transporter transmembrane region 510 832 IPR036640 GO:0005524|GO:0016021
Bhi05g00466 1095 ProSitePatterns ABC transporters family signature. 990 1004 IPR017871 GO:0005524
Bhi05g00466 1095 CDD ABC_6TM_Pgp_ABCB1_D2_like 521 836 - -
Bhi05g00466 1095 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 851 1087 IPR003439 GO:0005524
Bhi05g00466 1095 PANTHER ABC TRANSPORTER B FAMILY MEMBER 2 15 1090 - -
Bhi05g00466 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 845 1089 IPR027417 -
Bhi05g00466 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 455 IPR027417 -
Bhi05g00466 1095 CDD ABC_MTABC3_MDL1_MDL2 851 1086 - -
Bhi05g00466 1095 SMART AAA_5 244 436 IPR003593 -
Bhi05g00466 1095 SMART AAA_5 878 1050 IPR003593 -
Bhi05g00466 1095 ProSitePatterns ABC transporters family signature. 356 370 IPR017871 GO:0005524
Bhi05g00466 1095 Gene3D - 842 1095 IPR027417 -
Bhi05g00466 1095 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 217 453 IPR003439 GO:0005524
Bhi05g00466 1095 Gene3D - 215 468 IPR027417 -
Bhi05g00466 1095 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 532 818 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bhi05g00466 1095 Gene3D ABC transporter type 1, transmembrane domain 15 818 IPR036640 GO:0005524|GO:0016021
Bhi05g00466 1095 CDD ABC_6TM_Pgp_ABCB1_D1_like 15 190 - -
Bhi05g00466 1095 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 13 182 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bhi05g00466 1095 SUPERFAMILY ABC transporter transmembrane region 13 195 IPR036640 GO:0005524|GO:0016021
Bhi05g00466 1095 Pfam ABC transporter 236 384 IPR003439 GO:0005524
Bhi05g00466 1095 Pfam ABC transporter 870 1018 IPR003439 GO:0005524
Bhi05g00466 1095 CDD ABC_MTABC3_MDL1_MDL2 217 455 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00466 Bhi-Chr5:9878382 Bhi06g00408 Bhi-Chr6:8912055 1.59E-125 dispersed
Bhi10g00899 Bhi-Chr10:18414873 Bhi05g00466 Bhi-Chr5:9878382 2.39E-57 dispersed
Bhi10g00900 Bhi-Chr10:18414873 Bhi05g00466 Bhi-Chr5:9878382 4.09E-58 dispersed
Bhi10g01517 Bhi-Chr10:36954093 Bhi05g00466 Bhi-Chr5:9878382 1.41E-90 dispersed
Bhi05g00466 Bhi-Chr5:9878382 Bhi05g00467 Bhi-Chr5:9878382 8.18E-129 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00466 K05658 - csv:101219304 1977.6