Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00484 GACAAGACAATGTTTGGGGCTTTTTGATACAAACACTGAAATTGCTTTACCAACTTTGACGGCCGAAATGACTGAGCAAATAACCAATTTTAGTGCTTCTTTTATGTATGCTATTCATGAATGAATCACTCTCTCTTCTTTCTTTGTAAAAAAAGTTGAAACTTGGAAGAACTCTCCCATGAAAATCCCTCCCTTTCAGTCTCAAACTAAGCTTCAACCATACCATAAAGCATTCATTACTTTAATAAATTCCCCCACCAGCATCATCACCCTTAGTCAACAAACTGTTTTTCCCAAAAGCAACTCACAGAAAAAGAAAGATAAAGATAATGAAGAACAACCAACGAGAAAGAAAGAAAAAGATAGAGATACCCAACATTACCCATTTTCATTTACATTATCCTCTGCTTCCCCCCCTTTTCTTTCTTCCTTCTAACCCATTAATCTTTTTGTTCTGATTGTTTGTTTTTTCATCAGTTTTTCAGGTCTGTGCAATTGGAGTGCGATCTTCAGGTAATATTGTGCTTGTTTCTAACATATTCCTTCTAAACACTTGTTTCTGTTGTCTCCGTCCCCCAACTGTTTGATAAAATGCCACACCGAACAGTTTCGTGGATTCCGGGGAAGCATTTGATCTGTGTTGTACTAATTAGTTAGAAATCACCTGTTTCTCTGGAATTCTCTCCTGTTTCATTGGAGGGTTGATTGTAATTTGTAATAGTCGATTAATTTTCCTAGAACATTGATGGGGTCAGGGTCTTATAGCAGCCCTAAAACTTGGATACCATATATGAGCAACAAAGATTGCTCTCAAGGTTTCTGTAGTGTATATTGTCCTCAGTGGTGCTATATCATGTTTTCACCTCCACCACCCTTGGAGTTTCCAGATGATAATTCAGGCCCAAAATTTTCACCTCTTATTATTGCAATTATTGGAATTCTGGCCAGTGCTTTCCTTCTTATAAGCTATTACACTATCATTTCAAAGTACTGTGGCAACACAAATCGCTTATCTGGAACTGGAAATCATGACCCAAGTGAGGAATATGAAGATAATCACAACCCAACACTTCATGAGCCATGGCATATTGCCACAGCTGGCTTGGATGAAGCACTTATCAAGTCCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGCCTTAGTGAGTTTCAAGAAGATGAGAGCCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGCATTGATACTTGGCTTAAATCACACTCCAATTGTCCGTTATGTCGTGCTAATATCGTTTCTATCAATGCCACTTCTCCAATTCAACTCCCTCCAAGAGCTGCACATCCCATAACTAATGAGACCATGCCAGAGACTTCTCAGGCAAATGACCATGAGGCTGCTTCACAGGATTCTGGACGAAGTTTCAGGAATGAAGATGCAATGCAAGGAAGTAATTGTGCGAAAAGCTCAATTCGCGCTTTAAGTGACCTTGGAAATCTGGAGAAAAGAGATACTATCATTGAGCTTAGAGATGGAAGATTGCAGCAAATTAGAAGGTCAATTTCAATGGATCATTGCAGCCAAAACCATACTATTATCGCGGATGTTCTACGTTTAAATGAACATGAGTTTGGAGATATTGATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCTAAACATTCATTGGGAGAAGACGGCAGGTCAAGTCATAGAAACAGAATCTTGCAGTGTGTGATGAGTCCTGTTTCAATGAAGAGATCATTTTCAAGTGGAAGATTTTCTTTCTCCAAGCATGGAAGAGAACACAGGGGAATTGCCCCTGTCTGAAATTTTACAACAAAGAATCAGAATGATTTGCAGTTTTGATGAGGAACACCACACCAGAGGATTTTAAGAAATGAACATACACCATGTGAGTTGTTTAGCTGCTTTCAATGATTTCCCTTTATGGTTATTTATGGGTTTTAGTGAAAGAAAAGATCATCCCTGGCTTTTTCTTTATCATTCAACTGTCACAAGTATGTCTGATGCACCGATATTTTTCTTCTTCCATCAATTATTTGACTGCCTTTGCATTGCTTCTATGGAGATTATTACAAGATCTTTCTCTCTC 2138 38.73 MGSGSYSSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPKFSPLIIAIIGILASAFLLISYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPTLHEPWHIATAGLDEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSINATSPIQLPPRAAHPITNETMPETSQANDHEAASQDSGRSFRNEDAMQGSNCAKSSIRALSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNHTIIADVLRLNEHEFGDIDEAGSSGDVGSSKHSLGEDGRSSHRNRILQCVMSPVSMKRSFSSGRFSFSKHGREHRGIAPV 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10183220 10185357 - XM_039031740.1 Bhi05g00484 34694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00484 368 SMART ring_2 145 186 IPR001841 -
Bhi05g00484 368 SUPERFAMILY RING/U-box 139 194 - -
Bhi05g00484 368 MobiDBLite consensus disorder prediction 211 245 - -
Bhi05g00484 368 ProSiteProfiles Zinc finger RING-type profile. 145 187 IPR001841 -
Bhi05g00484 368 CDD RING-H2_EL5_like 144 187 - -
Bhi05g00484 368 Pfam Ring finger domain 144 187 IPR001841 -
Bhi05g00484 368 MobiDBLite consensus disorder prediction 208 245 - -
Bhi05g00484 368 MobiDBLite consensus disorder prediction 307 330 - -
Bhi05g00484 368 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 228 IPR044675 -
Bhi05g00484 368 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 274 360 IPR044675 -
Bhi05g00484 368 PANTHER E3 UBIQUITIN-PROTEIN LIGASE OS04G0590900-LIKE 274 360 - -
Bhi05g00484 368 PANTHER E3 UBIQUITIN-PROTEIN LIGASE OS04G0590900-LIKE 7 228 - -
Bhi05g00484 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 195 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00790 Bhi-Chr4:19524555 Bhi05g00484 Bhi-Chr5:10183220 1.16E-43 dispersed
Bhi05g00484 Bhi-Chr5:10183220 Bhi12g01440 Bhi-Chr12:46412911 1.34E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00484 - - cmo:103503554 651.358